The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	27282	78583	4101532	transposase,tRNA	Synechococcus_phage(25.0%)	49	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003816713.1|70128_70443_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|71635_73543_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|73703_74324_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|74355_74937_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|75025_75277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|75278_76121_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|76226_77636_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|77632_78583_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	107425	175248	4101532	transposase,tRNA	Bacillus_phage(22.22%)	56	NA	NA
WP_010929626.1|107425_108376_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109275_110469_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110550_111180_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111241_111925_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111934_113617_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113904_114252_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114342_114660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114942_115959_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116034_116835_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116831_117707_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117717_119010_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119052_120093_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120198_121020_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121120_122071_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122169_123075_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123071_123905_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124741_125752_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125748_126138_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_033446324.1|127019_128285_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128375_130076_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130502_131150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131148_132588_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132698_132983_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133010_133889_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135155_136106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815155.1|136524_138033_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
WP_019247146.1|138779_142742_+	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929644.1|142794_143577_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929645.1|143664_144888_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929646.1|144871_145804_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_003817676.1|145809_146622_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929647.1|147934_148906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815135.1|149024_149807_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929648.1|150573_151554_-	biotin-dependent carboxyltransferase	NA	NA	NA	NA	NA
WP_010929649.1|151550_152279_-	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_003815126.1|152303_152735_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929650.1|152836_153712_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853237.1|153762_154962_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.1e-91
WP_010929652.1|155065_155527_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_010929653.1|155632_157030_-	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929654.1|157026_157704_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
WP_010929655.1|157759_159070_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
WP_003815113.1|159081_159780_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
WP_003815111.1|159943_160720_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_010929656.1|160885_161908_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_023853232.1|162136_162772_+	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
WP_023995348.1|162777_164331_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
WP_005015810.1|164889_165840_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167283_168186_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168163_168793_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169075_170506_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170539_171169_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171217_172825_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172849_173533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173614_174091_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174297_175248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	178630	236266	4101532	transposase,protease,tRNA	Klosneuvirus(14.29%)	47	NA	NA
WP_010929666.1|178630_180709_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180958_181231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181332_182418_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182421_184326_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184322_187997_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188057_188621_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188628_189051_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189078_189498_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189526_189973_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190099_190597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190751_193022_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193097_194303_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929673.1|195453_196089_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196085_196979_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197373_198474_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198555_198930_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198989_201854_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|201998_202739_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202808_204020_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204048_205017_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205630_206581_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206737_207061_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207165_208206_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208211_208991_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209036_209333_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209358_209634_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209690_210335_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210334_211021_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211219_212002_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212052_212778_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212809_214159_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214270_215203_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215660_218456_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219049_221893_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222063_222783_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222821_223370_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223524_224424_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224448_225399_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|225617_226313_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|226329_227742_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|227854_229285_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|229326_231240_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|231558_232125_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|232215_233217_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_005012067.1|233331_234282_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234368_235319_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235315_236266_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	250679	303013	4101532	transposase,protease,tRNA	Bacillus_phage(25.0%)	46	NA	NA
WP_003814337.1|250679_251621_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251617_253507_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_033446171.1|253611_254232_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254374_255760_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255690_256227_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256378_257770_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257786_258767_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258902_259886_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259950_260850_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260956_262711_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262718_263843_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263856_264837_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|265567_266518_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267077_267623_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|267748_269326_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269341_270496_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270509_270635_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270631_272383_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272379_274059_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274121_274670_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275812_276091_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277134_278085_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|278361_278523_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278530_278671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815819.1|279647_280259_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|280417_281266_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281291_282674_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282738_283380_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283519_283978_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284002_284779_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284832_285969_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285965_286916_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807705.1|287014_287641_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_003807706.1|287663_288590_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003819100.1|288598_290185_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929723.1|290181_291186_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003807710.1|291385_292246_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|292277_293279_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003819104.1|293349_294159_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003819105.1|294236_296096_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_010929725.1|296224_297427_-	MFS transporter	NA	NA	NA	NA	NA
WP_004566082.1|297540_298422_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004566083.1|299924_300485_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_005013747.1|300544_301495_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|301686_301974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|302062_303013_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	390848	448357	4101532	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390848_391799_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391935_392853_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392849_393098_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393094_394300_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394372_395368_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395390_396611_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396607_397252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398982_399792_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400096_401050_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401148_402132_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402058_402760_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402808_403579_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403575_404754_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404921_406628_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406624_407521_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407561_409151_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409200_410193_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410261_410861_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411321_412302_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412377_413328_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413416_414331_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414327_414987_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415076_416000_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416005_416461_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_023853020.1|416457_417459_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_042962164.1|417393_417789_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|417748_419368_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419364_420423_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420552_421047_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421139_422117_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422312_423518_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423514_425026_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425041_426355_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426545_426725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427134_427869_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430313_431264_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431395_431794_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432204_432675_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432763_433108_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433207_434608_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436396_436915_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437025_437781_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437976_439209_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439201_439987_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440053_441025_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441035_442013_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442138_443311_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443337_444366_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444431_445625_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447406_448357_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	591460	652649	4101532	transposase,protease	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|591460_592411_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|592886_593777_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|593773_594595_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|594794_595286_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|595304_596378_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|596424_597528_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|597603_598224_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|598244_598754_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|598808_599060_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_077108607.1|599056_600256_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|600263_600650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|600646_603166_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|603594_603933_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|603929_604436_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|604497_605298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|605408_606350_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|606443_607979_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|609658_611509_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|611512_612346_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|612345_613287_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|613538_614510_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|614651_616940_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|617245_618154_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|618208_619174_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|619248_620910_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|620981_621692_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|621840_622791_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|623489_623873_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|623930_624533_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|624550_624952_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|625067_625979_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|625975_626557_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_033446151.1|627360_628086_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|628126_629176_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|629323_629902_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|630288_631266_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|631359_635754_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|635954_636803_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|636961_637774_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|637829_638780_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|638878_639679_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|639740_640124_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|640135_641488_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|641775_642105_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|642107_642857_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|643039_643960_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|644006_644219_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|644241_644664_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|644680_645781_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|645877_647395_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|647470_648310_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|648331_649204_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|649294_650389_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|650682_651633_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|651707_652649_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	657973	704164	4101532	transposase,tail,terminase,tRNA	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|657973_658999_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|659039_659279_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|659348_660938_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|660937_661486_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|661566_662139_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|662157_663069_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|663142_664111_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|664233_665307_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|665311_667132_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|667208_668159_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|668247_668583_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|668716_669367_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|669388_670807_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|670876_671632_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|671600_672359_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|672369_673251_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|673267_673975_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|673977_674736_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|674945_676688_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|676680_677205_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|677244_678039_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|678206_679280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|679378_680329_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|680580_680787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|680858_681470_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|682024_682276_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|682268_682958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|683214_684165_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|684804_685290_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|685276_686554_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|686556_687975_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|688003_689059_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|689064_689307_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|689429_690032_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|690460_691411_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|692085_692337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|692399_692882_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|692883_693084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|693083_693479_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|693475_693874_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|693870_694293_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|694300_694801_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|695055_695574_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|695583_695913_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|695930_696221_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|696246_698859_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|698868_699228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|699295_699829_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|699825_700215_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|700207_704164_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	749228	822388	4101532	transposase	Streptococcus_phage(16.67%)	56	NA	NA
WP_005013747.1|749228_750179_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|750833_751931_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|751964_753230_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929982.1|754580_755171_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|755186_757631_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|757750_758722_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|758853_759378_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|759337_760288_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|760509_762705_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|762777_763206_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|763307_764258_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807452.1|764373_764817_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010925762.1|764879_765674_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807457.1|765839_766976_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_003807459.1|767046_768180_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807460.1|768329_768590_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807462.1|768623_768935_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_010929987.1|769359_770508_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_010929988.1|770622_771588_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929989.1|771856_772723_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929990.1|772853_774902_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929991.1|774919_776917_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929992.1|776951_778289_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_023853308.1|778551_780405_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929993.1|780459_781941_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929994.1|781956_782514_-	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_153302771.1|782583_782892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929996.1|788189_790328_+	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929997.1|790324_791647_+	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929998.1|791648_793073_+	TolC family protein	NA	NA	NA	NA	NA
WP_010929999.1|793163_794072_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930000.1|794136_795051_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807497.1|795888_796572_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_020699739.1|796603_797332_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_010930002.1|797361_798222_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818983.1|798229_798796_-	membrane protein	NA	NA	NA	NA	NA
WP_010930003.1|798884_799841_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930004.1|799885_800638_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930005.1|800634_802380_-	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930006.1|802464_803199_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|803515_804538_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023999677.1|804553_805276_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818991.1|805420_806428_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_010930009.1|806468_808001_-	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_004566042.1|807997_809116_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930010.1|809112_809895_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818996.1|809906_810770_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930011.1|810788_811886_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|811954_812881_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930013.1|812915_814610_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_023998705.1|814809_815703_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_005013747.1|815850_816801_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930050.1|816899_817556_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930049.1|817703_820412_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_003813068.1|820421_821441_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_041337087.1|821437_822388_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	886846	954822	4101532	transposase	Bacillus_phage(33.33%)	58	NA	NA
WP_023994644.1|886846_887863_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|888059_889043_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|890641_892030_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|892060_893050_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|893160_894393_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|894674_895475_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|895497_897729_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|898516_898963_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|898984_899731_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|899874_900852_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|901485_902097_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|902090_903308_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|903448_904399_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|904395_905115_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|905235_907395_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|907485_907755_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|907843_908050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|908048_908576_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|908594_909374_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|909541_910558_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|910630_911122_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|911132_912848_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|914011_914962_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|914958_916791_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|917189_917849_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|917942_918089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|918197_918365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|918376_919057_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|919338_920055_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|920069_921371_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|923515_926404_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|926627_927980_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|928008_928530_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|928526_929981_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|930015_930264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|930369_931245_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|931270_932326_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|932338_933130_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|933162_934533_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|935709_936660_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|936712_936934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|937093_937306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|937425_938544_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|938640_938856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|939049_939301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|939413_940364_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|940360_940744_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|940798_942613_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|942762_943590_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|943635_944616_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|944612_944825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|944821_946003_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|946166_946901_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|946902_949515_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|949650_951564_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|952179_952590_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|952687_953773_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|953871_954822_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	998351	1070868	4101532	transposase,tRNA	Enterococcus_phage(14.29%)	60	NA	NA
WP_005012067.1|998351_999302_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|999406_1000456_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1000593_1001610_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1003118_1003691_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1003750_1004482_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1004533_1005451_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1006258_1009438_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1009434_1010817_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1010886_1011138_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1011283_1011898_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1012084_1014145_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1014274_1015126_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1015122_1015749_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1015745_1017500_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1017792_1020498_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1020510_1022172_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1022184_1023975_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1024196_1025372_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1025414_1026365_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1026463_1027204_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1027398_1029435_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1029452_1030463_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1030580_1031774_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1031803_1032577_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1032573_1033764_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1033789_1034728_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1034724_1037073_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1037227_1037869_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1039198_1039351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1039382_1039931_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1039949_1040435_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1040612_1041551_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1041553_1041871_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1041916_1042861_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1044541_1045192_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1045245_1045581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1045577_1046438_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1046454_1046736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1046809_1047073_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1047316_1048267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1048565_1049303_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1049738_1050062_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1050096_1050657_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1050777_1051653_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1051665_1052613_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1052714_1053008_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1053034_1055092_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1055106_1055607_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1055680_1057387_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1058250_1059303_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1059355_1059745_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1059753_1060386_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1060485_1061502_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1062332_1063340_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1063336_1064980_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1064976_1065864_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1066004_1066478_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1066467_1067490_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1067486_1068914_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1069851_1070868_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	1074621	1155014	4101532	transposase,tRNA,holin	Planktothrix_phage(16.67%)	60	NA	NA
WP_010930155.1|1074621_1075758_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1075754_1076828_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1076985_1078422_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1078512_1079154_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1079489_1080506_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019248433.1|1080838_1083586_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1083652_1085074_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1085337_1086054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1086138_1086456_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1086496_1086910_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1086911_1087271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1087313_1088858_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1088941_1089772_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1089806_1090961_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1091003_1091876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1091992_1094281_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1095487_1095952_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1095978_1096929_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1097296_1098073_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098117_1098975_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1098996_1100013_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100147_1101188_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101382_1103464_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103699_1105193_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105423_1106218_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106438_1107797_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1107793_1108636_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108654_1110541_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1110482_1110734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1110778_1111411_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111429_1112032_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_161633091.1|1113713_1114421_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1114779_1115766_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1115905_1116919_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1116915_1117866_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1117978_1118437_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1118473_1119787_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1119804_1120176_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1120172_1121636_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1121776_1122505_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1122486_1125336_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1125548_1126499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1126666_1127491_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1127490_1128369_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1129273_1130389_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1130417_1131212_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1131208_1133074_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1133152_1133785_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1133781_1134084_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1134126_1135647_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1135653_1136409_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1136438_1137543_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1137645_1139346_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_023853218.1|1139327_1140269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1140314_1141595_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1141587_1142283_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1142316_1143144_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1143425_1146656_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930196.1|1147391_1151318_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1153217_1155014_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	1317935	1383363	4101532	transposase	Planktothrix_phage(33.33%)	52	NA	NA
WP_005012808.1|1317935_1318886_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1319654_1320293_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1321182_1321629_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1321710_1322412_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1322412_1323180_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1323176_1324415_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1324414_1325341_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1325443_1326559_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1326574_1327525_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1327878_1328460_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1328456_1329290_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1329500_1330814_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1330990_1331872_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1331891_1332743_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1332795_1333884_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1333994_1335122_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1335356_1335968_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1336066_1337017_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1337238_1337616_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1337763_1338261_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1338257_1338785_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1338918_1339734_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1339746_1340928_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1340975_1341869_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1341995_1342466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1342591_1343419_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_010930295.1|1344510_1344975_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1344986_1345688_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1345797_1346298_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1346380_1347559_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1349186_1349522_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1349709_1351158_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1351215_1351560_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1351666_1352206_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1352298_1353249_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1353347_1354298_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1354396_1354804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1355036_1355468_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1355649_1356054_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1357290_1357614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1357616_1358504_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1358536_1358962_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1359033_1359387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1360170_1361502_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1361561_1362377_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1362373_1363228_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1366290_1368834_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1370200_1371955_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1371951_1374072_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1374076_1376272_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1376268_1379610_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1382412_1383363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	1447961	1503448	4101532	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1447961_1448912_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1450113_1450560_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1450552_1452028_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1452024_1452780_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1452772_1453783_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1453772_1455449_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1455761_1456094_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1456107_1456503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1456512_1456839_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1456835_1457162_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1457088_1458111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1458107_1458458_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1458505_1458934_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1458941_1460315_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1460455_1460833_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1461095_1462403_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1462463_1463294_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1463290_1463779_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1463820_1465341_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1465384_1465861_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1466664_1469262_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1469291_1470113_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1470839_1471589_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1471772_1472651_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1472748_1473465_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1473479_1474040_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1474206_1474971_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1474990_1475848_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1475844_1477044_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1477083_1478418_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1478470_1480807_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1480932_1481496_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1481504_1482596_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1482667_1483123_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1483123_1483918_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1483914_1485096_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1485082_1485688_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1485684_1486458_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1486469_1487297_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1487458_1489822_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1489889_1490609_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1490732_1491158_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1491192_1492143_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1492260_1493187_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1493252_1494410_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1494390_1494858_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1495005_1495956_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1495972_1496407_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1496396_1496747_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1496943_1498098_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1498094_1499267_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1499314_1500208_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1500253_1500691_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1500750_1501440_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1501449_1502400_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1502497_1503448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	1594404	1662488	4101532	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1594404_1594893_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1595010_1595589_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1595694_1596063_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1596161_1597112_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1597118_1598231_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1598917_1600120_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1600155_1600302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1600323_1602984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1602996_1606401_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1607068_1609294_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1609340_1609667_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1609717_1610326_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1610424_1611375_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1611444_1612209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1612205_1612742_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1612908_1613760_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1613819_1614446_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1614442_1615393_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1615491_1616604_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1616593_1617595_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1617700_1619212_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1619208_1620513_-	imelysin	NA	NA	NA	NA	NA
WP_033446227.1|1620624_1621182_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_010930432.1|1621452_1622007_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1622462_1622678_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1622932_1625530_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1625526_1626714_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1627371_1627986_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1628074_1629196_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1629213_1630119_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1631011_1631962_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1632143_1632896_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1632964_1633624_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1633620_1634349_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1634361_1636641_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1636665_1636869_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1636910_1637543_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1637678_1638596_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1638592_1639306_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1639543_1640314_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1640318_1640918_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1641162_1642653_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1642711_1642996_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1643133_1643289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1643561_1644488_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1644624_1645365_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1645531_1646908_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1647089_1647995_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1649646_1651449_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1651575_1652217_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1652315_1653266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1653287_1654508_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1654693_1656106_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1656169_1657237_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1657236_1658724_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1658733_1659678_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1659836_1660535_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1660612_1661518_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1661537_1662488_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	1698437	1754028	4101532	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1698437_1699388_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1699446_1700220_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1700212_1701769_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1701765_1702716_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1704042_1704645_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1704884_1705586_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1705579_1706362_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1706546_1707497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1707595_1708333_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1708522_1709281_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1709327_1710317_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1710494_1711463_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1713002_1713971_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1713979_1714921_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1715394_1716405_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1716395_1717910_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1717906_1719253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1719255_1720290_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1720339_1721965_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1722517_1723468_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1723572_1724520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1724573_1726388_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1726380_1727055_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1727184_1730259_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1730272_1730572_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1730886_1731510_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1731753_1732623_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1732600_1733545_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1733630_1734557_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1734669_1735449_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1735439_1736636_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1736666_1737617_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1737838_1738528_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1738592_1739348_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1739399_1740392_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1740401_1741355_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1741470_1742433_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1743834_1744263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1744259_1745210_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1745503_1746226_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1746664_1747852_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1747855_1748206_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1749955_1750927_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1750940_1751654_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1751658_1752576_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1752682_1752979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1753077_1754028_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	1999794	2073012	4101532	transposase	Bacillus_virus(20.0%)	60	NA	NA
WP_010929591.1|1999794_2000745_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2001196_2002198_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2002370_2003228_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2003224_2004487_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2004587_2004962_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010930713.1|2005034_2006222_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2006305_2007076_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2007189_2007954_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2007904_2009206_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_023853104.1|2009214_2010009_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|2011753_2012725_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2012881_2013394_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2013552_2014527_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2015527_2016322_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2016347_2017154_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2017264_2017855_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2017865_2019044_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2019146_2019521_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2019773_2021105_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2021171_2024402_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2025892_2026639_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2026723_2027185_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2027222_2028281_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2028243_2030073_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2030112_2030685_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2032109_2032931_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2033249_2034572_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2034931_2035567_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2035526_2036477_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2037347_2038220_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2038297_2039437_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2039795_2041052_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2041057_2041585_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2041589_2042408_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2042407_2043130_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2043151_2043466_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2043483_2044632_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2044662_2045538_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2045534_2046854_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2046926_2048123_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2048133_2049621_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2052215_2053115_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2053252_2054218_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2054316_2055267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2055488_2056439_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812024.1|2056435_2056738_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_003812026.1|2056897_2057302_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_010930743.1|2057294_2058521_+	NnrS family protein	NA	NA	NA	NA	NA
WP_003812030.1|2058517_2058964_+	membrane protein	NA	NA	NA	NA	NA
WP_003812032.1|2059033_2059816_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_010930744.1|2059857_2061363_+	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247851.1|2061648_2062482_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930745.1|2063919_2064741_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930746.1|2064759_2065614_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_003812044.1|2065617_2066589_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247855.1|2067273_2067450_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|2067935_2068886_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2070029_2070326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2070500_2071853_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930158.1|2071995_2073012_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2086218	2131577	4101532	transposase	Bacillus_phage(25.0%)	44	NA	NA
WP_010929577.1|2086218_2087169_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2087821_2088772_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2088855_2090673_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2090746_2091394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2091406_2092336_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2092505_2092970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2093217_2093898_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2093946_2095638_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2095653_2096205_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2096201_2096573_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2096685_2097522_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2097532_2098057_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2098154_2098334_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2098463_2099438_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2099568_2099925_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2099914_2100790_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2100888_2101773_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2101794_2103090_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2104038_2104689_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2104776_2106297_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2106554_2108420_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2109465_2110416_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2110433_2110574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2111375_2111735_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2111722_2113159_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2113155_2113809_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2113805_2114999_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2115102_2116377_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2116373_2117324_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2118055_2119006_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810379.1|2119510_2119654_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_003810383.1|2121275_2121938_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003818560.1|2121940_2122117_+	cytochrome oxidase	NA	NA	NA	NA	NA
WP_010930775.1|2122113_2123052_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_010930776.1|2123143_2124634_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930777.1|2124719_2124872_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930778.1|2124885_2125125_+	membrane protein	NA	NA	NA	NA	NA
WP_010930779.1|2125220_2125964_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930780.1|2125996_2126497_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930781.1|2126595_2127519_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_003810400.1|2127515_2128277_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930782.1|2128292_2129378_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005013747.1|2129577_2130528_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2130626_2131577_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2141817	2201086	4101532	tRNA,transposase,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_010930787.1|2141817_2142717_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2142735_2144040_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2144005_2145112_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2145199_2145436_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2145574_2146645_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2146648_2148004_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2148030_2149188_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2149193_2149832_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2149833_2151129_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_033446257.1|2151178_2152465_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2152480_2152987_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2152983_2154132_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2154159_2154585_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2154907_2157790_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2157882_2158638_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2159403_2160753_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2160850_2161801_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2161899_2162850_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2162923_2163397_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2163422_2164631_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2164627_2165401_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2165400_2166024_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2166189_2166450_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2166753_2167335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2167401_2167656_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2167642_2170267_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2170338_2171157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2171153_2171759_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2171796_2172930_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2174645_2175020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2175117_2176392_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2176395_2177973_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2178879_2180235_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2180231_2181866_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2181858_2182689_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2182706_2183651_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2183703_2185278_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_033446181.1|2185325_2185691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2185677_2185998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2186113_2187046_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2187148_2188105_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2188254_2189592_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2189596_2190853_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2191048_2192095_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2192152_2192521_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2192651_2193524_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2193600_2194503_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2195559_2196777_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2198050_2199001_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2199201_2200011_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005013747.1|2200135_2201086_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2214279	2279098	4101532	tRNA,transposase,protease	Lake_Baikal_phage(18.18%)	54	NA	NA
WP_005012067.1|2214279_2215230_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2215800_2216013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2216030_2216762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2216796_2217438_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2217430_2218099_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2220311_2221088_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2221109_2222267_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2222263_2222695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930562.1|2222691_2223489_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_029443773.1|2223508_2223964_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2223976_2224948_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2225013_2226237_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2226464_2227415_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2227538_2229992_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2230180_2231485_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2231589_2232243_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2232245_2233556_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2233752_2234313_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2234424_2234625_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2234970_2235537_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2235620_2235824_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2236130_2236451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2236492_2236774_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2236848_2238105_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2238487_2238817_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2240386_2241208_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2241207_2242347_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2242353_2243250_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_033446179.1|2243264_2245172_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2245531_2248144_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2248196_2250497_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2250493_2251702_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2251963_2252338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2252334_2253285_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2253382_2255377_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2255436_2256402_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2256391_2259253_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2259255_2259762_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2259866_2261075_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2261076_2262015_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2262176_2262650_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2262646_2263597_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2263707_2264148_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2264276_2265506_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2265544_2266366_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2266419_2267571_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_023852690.1|2267662_2268133_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2270701_2273251_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2273321_2275895_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2276160_2276361_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2276392_2276554_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2276611_2276950_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2277098_2278049_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2278147_2279098_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2683234	2723901	4101532	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2683234_2684185_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2684295_2684478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2684577_2685174_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2685357_2686449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2686948_2687359_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2687417_2687747_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2687764_2690182_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2690194_2691217_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2691291_2691651_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2691666_2691864_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2692199_2693150_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2693344_2693794_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2693790_2694741_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2694851_2696300_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2696414_2696660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2696799_2697750_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2697994_2698708_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2698830_2699058_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2699352_2699991_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2700099_2701134_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2701130_2702081_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2702496_2703021_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2703024_2703294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2703492_2704554_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2704637_2706272_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2706273_2707077_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2707105_2708065_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2708068_2709583_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249423.1|2709619_2710879_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931018.1|2711053_2711524_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2711559_2712171_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2712201_2712825_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2712905_2714438_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2714472_2715690_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2715757_2716789_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2716785_2717955_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2717948_2718629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2718790_2719633_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2719795_2720767_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2720938_2721817_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2721839_2722910_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2722950_2723901_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2779366	2852236	4101532	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2779366_2779783_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2779893_2780526_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2780554_2780998_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2781019_2782111_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_162832304.1|2782165_2782957_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2783101_2783722_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2783861_2784335_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2785474_2786425_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2786421_2794083_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2794323_2798370_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_023853219.1|2798727_2799264_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2799260_2800559_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2800638_2801667_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2801927_2802878_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2802874_2803825_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2804141_2804747_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2804800_2806114_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2806188_2806659_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2806658_2807447_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2807457_2809110_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2809197_2810148_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2811309_2811816_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2811812_2812577_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2812592_2812877_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2812941_2813931_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2814102_2815032_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2815003_2815690_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2815723_2816269_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2816313_2817579_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2817575_2818478_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2819659_2820604_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2820698_2822216_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2822257_2823886_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2823993_2824875_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2827987_2828362_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2828386_2828725_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2828768_2830403_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2830441_2831788_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2831895_2833317_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2833386_2833971_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2834073_2835024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2835158_2836265_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2836275_2837373_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2837517_2838723_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2838729_2839251_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2839247_2839730_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2839735_2839987_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2839967_2840453_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2840588_2844050_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2844067_2844952_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2844961_2845393_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2845639_2846143_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2846220_2847621_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2847695_2848571_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2848567_2849575_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2850042_2850348_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2850438_2851029_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2851219_2852236_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2855379	2922188	4101532	transposase,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
WP_010929956.1|2855379_2856330_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2856428_2857379_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2857375_2858170_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2858201_2858906_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2858980_2859781_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2859777_2860185_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2860181_2860823_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2860815_2862816_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2864076_2865408_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2865404_2866355_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2868061_2868328_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2869035_2869374_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2873926_2874529_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2874625_2875915_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2875972_2876704_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2876700_2877504_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2877500_2878589_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2878585_2879515_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2879663_2880809_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2880830_2881781_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2882111_2885933_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2886089_2886758_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2886762_2888436_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2888454_2889774_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2889778_2892094_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2892149_2894318_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2894314_2899495_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2899593_2899908_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2900135_2900381_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2900475_2900994_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2901093_2902299_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2902414_2903812_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2903928_2904507_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2904579_2905971_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2906138_2907089_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2907369_2907990_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2907986_2908400_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2908396_2909440_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2909495_2909684_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2909693_2910458_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2910548_2911205_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2911296_2912055_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2912080_2913682_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2913882_2914887_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2914987_2915251_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_023853341.1|2915368_2916136_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2916734_2917685_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_151243721.1|2920068_2921166_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2921237_2922188_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	2952574	2996265	4101532	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2952574_2953525_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2953645_2954542_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2956819_2959045_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2959209_2960298_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2960254_2960908_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2960955_2961753_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2962284_2963235_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2963315_2964464_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2964520_2965471_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2965569_2965875_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2965903_2966338_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2966339_2967584_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2967580_2968291_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2968305_2969217_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2969579_2969984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2969980_2970439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2970445_2971354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2971350_2972217_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2972203_2973031_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2973041_2974169_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2975246_2976485_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2976526_2977789_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2977795_2978548_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2978599_2978785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2979060_2979525_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_023996698.1|2979604_2980216_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2980360_2982469_+	AsmA family protein	NA	NA	NA	NA	NA
WP_076879634.1|2982465_2983416_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2983519_2984140_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2984243_2984984_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2986118_2987243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2987288_2987657_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2987898_2988849_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2989884_2990427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2990812_2991763_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2991759_2992668_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2992794_2993631_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2994143_2995253_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2995314_2996265_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3118847	3182682	4101532	transposase,protease,tRNA	Pseudomonas_phage(30.0%)	55	NA	NA
WP_005015810.1|3118847_3119798_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122802.1|3119943_3121068_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	3.8e-38
WP_023853315.1|3121273_3121837_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_003814871.1|3122831_3123314_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_003814873.1|3123471_3124719_-	serine hydroxymethyltransferase	NA	A0A219YCZ0	Aeromonas_phage	52.7	1.1e-99
WP_003820605.1|3124939_3125596_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_003814877.1|3125631_3126861_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_005012067.1|3127128_3128079_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931221.1|3128170_3129586_+	M23 family metallopeptidase	NA	A8ATH6	Listeria_phage	46.9	1.9e-18
WP_010931222.1|3129591_3130728_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_003814883.1|3130797_3131169_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	56.9	4.7e-30
WP_010931223.1|3131256_3132003_-	membrane protein	NA	NA	NA	NA	NA
WP_003820599.1|3132039_3133104_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_010931224.1|3133292_3133685_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_010927106.1|3133694_3134123_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_004567739.1|3134418_3135516_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004567741.1|3135857_3137222_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_023853313.1|3137280_3137832_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_010931226.1|3137845_3138520_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931227.1|3139776_3140586_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.9	2.6e-33
WP_010931228.1|3140588_3141425_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003820594.1|3141439_3142132_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_003820593.1|3142143_3142533_-	VOC family protein	NA	NA	NA	NA	NA
WP_003820592.1|3142638_3144027_-	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	33.5	4.6e-54
WP_010931229.1|3144143_3145640_-	membrane protein	NA	NA	NA	NA	NA
WP_010931230.1|3145936_3146611_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3146709_3147660_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931231.1|3147656_3150116_-	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_033446281.1|3150251_3151658_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010931233.1|3151661_3152849_-	MFS transporter	NA	NA	NA	NA	NA
WP_023998238.1|3152917_3153427_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814925.1|3153628_3154081_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247415.1|3154642_3157705_+	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA	NA
WP_010931235.1|3158010_3160938_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	43.9	3.4e-171
WP_003814929.1|3160959_3162156_+	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2H4P762	Pseudomonas_phage	28.9	1.0e-33
WP_010931236.1|3162473_3163001_+	histone H1-like DNA-binding protein	NA	NA	NA	NA	NA
WP_023853329.1|3163154_3163715_+	YggT family protein	NA	NA	NA	NA	NA
WP_023853325.1|3163722_3165177_-	D-alanine--poly(phosphoribitol) ligase	NA	A0A2K9L3I8	Tupanvirus	25.1	7.3e-26
WP_010931239.1|3165196_3166324_-	membrane-bound O-acyltransferase	NA	A0A125RNP0	Pseudomonas_phage	30.8	3.7e-25
WP_019248818.1|3166453_3167629_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_003814943.1|3167606_3167846_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_010931240.1|3168126_3168630_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010931241.1|3168802_3169744_-	carbohydrate kinase family protein	NA	NA	NA	NA	NA
WP_010931242.1|3169755_3170853_-	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_003814951.1|3171818_3173165_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_003814952.1|3173174_3173624_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003814953.1|3173713_3174148_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_023853327.1|3174226_3174775_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_003814955.1|3174857_3176228_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_010931244.1|3176238_3176832_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_014486102.1|3176903_3178787_+	RNB domain-containing ribonuclease	NA	NA	NA	NA	NA
WP_010931246.1|3178824_3179724_+	TonB family protein	NA	NA	NA	NA	NA
WP_010931247.1|3179720_3180584_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_010929853.1|3180682_3181633_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3181731_3182682_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3230825	3246060	4101532	transposase,protease	Erwinia_phage(100.0%)	15	NA	NA
WP_005012808.1|3230825_3231776_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814611.1|3232220_3232532_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_003820745.1|3232531_3233062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3233223_3234174_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3234272_3235223_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820744.1|3235512_3235977_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_010931270.1|3235991_3237497_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_010931271.1|3237750_3239358_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814620.1|3239413_3240319_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|3240759_3241710_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3241807_3242758_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853416.1|3242839_3243421_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_003807161.1|3243845_3244151_+	copper-binding protein	NA	NA	NA	NA	NA
WP_003807162.1|3244164_3245499_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_010931291.1|3245520_3246060_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 26
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3264483	3329366	4101532	transposase,tRNA,holin,integrase,protease	Tupanvirus(12.5%)	48	3257877:3257895	3330634:3330652
3257877:3257895	attL	GGCCAGCGCGCGGGCGCGC	NA	NA	NA	NA
WP_010931277.1|3264483_3264819_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003807199.1|3264818_3265661_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_005013747.1|3265759_3266710_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818443.1|3266774_3267746_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818444.1|3267809_3268829_-	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003807204.1|3268830_3270204_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_010931276.1|3270481_3271162_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_010931275.1|3271237_3273301_+	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.3e-14
WP_010931274.1|3273297_3274392_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_023995245.1|3274406_3275597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853440.1|3275685_3277374_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	1.6e-48
WP_003818450.1|3277648_3278401_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_005012808.1|3278539_3279490_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443788.1|3279802_3281281_+	phospholipase D family protein	NA	NA	NA	NA	NA
WP_010931293.1|3281287_3282397_-	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
WP_003808339.1|3282408_3283089_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003808340.1|3283110_3283866_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925959.1|3284001_3284886_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931294.1|3284973_3285555_+	CGNR zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_004566249.1|3285815_3286115_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010931296.1|3286266_3286746_-	membrane protein	NA	NA	NA	NA	NA
WP_023853362.1|3287465_3288902_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_010931297.1|3288898_3289327_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3289417_3290368_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814148.1|3290895_3291669_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814146.1|3291801_3292812_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931298.1|3292963_3294619_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814142.1|3294673_3295015_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931299.1|3295028_3296468_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814139.1|3296600_3297416_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3297609_3298560_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247274.1|3299953_3300895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905961.1|3301121_3301862_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3301947_3302898_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905963.1|3304339_3305911_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247179.1|3306243_3308097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247178.1|3308141_3310706_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3311124_3312075_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|3314940_3315435_-	DUF4276 family protein	NA	NA	NA	NA	NA
WP_076879586.1|3316387_3316588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931301.1|3316584_3317796_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931302.1|3317811_3320763_-	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_019247951.1|3320764_3323521_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931304.1|3324031_3325078_-	Fic family protein	NA	NA	NA	NA	NA
WP_010931305.1|3325419_3326547_-|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931306.1|3326826_3327918_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931307.1|3327990_3328773_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931308.1|3328769_3329366_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
3330634:3330652	attR	GGCCAGCGCGCGGGCGCGC	NA	NA	NA	NA
>prophage 27
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3378304	3432045	4101532	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3378304_3379255_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3379659_3380304_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3380328_3380913_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3381013_3381631_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3381633_3383349_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3383345_3383654_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3383670_3384288_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3384332_3384635_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3384735_3385590_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3385777_3386002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3386171_3386444_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3386861_3387269_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3387638_3388433_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3388533_3389769_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3389837_3390854_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3390865_3392242_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3392238_3393435_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3393431_3394970_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3394966_3396226_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3398166_3399117_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3399883_3400978_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3400970_3402305_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3402258_3402942_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3402967_3404131_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3404127_3405129_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3405128_3406001_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3405997_3406747_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3406743_3407535_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3407531_3408671_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3408946_3409732_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3409765_3410548_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3410551_3410941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3412080_3412944_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3412979_3414068_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3414064_3415015_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3415368_3418347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3419273_3420152_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3422100_3423051_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3423047_3423515_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3423557_3424328_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3424348_3425149_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3425159_3426569_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3426663_3427449_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3427688_3428705_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3428812_3429205_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3429342_3430023_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3430027_3430999_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3431094_3432045_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3438199	3497498	4101532	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3438199_3439963_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3440074_3440953_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3441065_3441881_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3441884_3442136_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3442220_3443237_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3443567_3443789_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010931364.1|3446149_3447016_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3447564_3448773_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3448852_3450424_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3450541_3451477_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3451665_3452610_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3453177_3458895_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3458900_3460028_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3460083_3460710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3460981_3461998_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3462093_3462804_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3462800_3463790_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3463885_3465517_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3465519_3466257_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3466412_3467285_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3467634_3468774_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3468770_3469430_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3469501_3470134_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3470163_3470682_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3470692_3471802_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3471848_3472703_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3472704_3473607_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3474829_3475780_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3477536_3478526_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3478522_3478681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3478701_3479490_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3479486_3480518_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3480536_3481100_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3481154_3482675_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3482938_3483643_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3483650_3484379_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3484493_3484868_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3484910_3486200_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3486196_3487366_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3487362_3488202_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3488261_3489197_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3489209_3490160_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3490258_3491221_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3491252_3491612_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3491736_3492639_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3492640_3494413_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3494447_3495224_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3496547_3497498_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3512436	3570507	4101532	transposase,tRNA	Planktothrix_phage(12.5%)	46	NA	NA
WP_005012808.1|3512436_3513387_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3513515_3514649_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3514692_3515598_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3515600_3517301_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3517297_3518218_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3518225_3519203_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815317.1|3522269_3522506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3522632_3523496_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3523584_3524406_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3524485_3525223_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3525219_3526212_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3526364_3526988_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3527032_3528181_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3530503_3531454_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3531794_3532745_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3532843_3533794_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3534090_3534588_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3534630_3536406_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3536413_3537280_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931405.1|3537286_3538012_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023852623.1|3539190_3539961_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3540274_3540865_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3540898_3542227_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3542301_3543447_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3543558_3544557_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3544519_3544954_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3546470_3547355_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3547351_3548557_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3548553_3549414_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3549526_3551317_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_023852857.1|3551357_3552008_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.6e-11
WP_010929971.1|3552023_3552332_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3552497_3553784_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3555217_3556168_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3558119_3559334_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3559439_3560429_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3560425_3561034_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3561046_3561676_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3561672_3562293_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3562324_3563116_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3563967_3564423_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3564441_3565368_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3565421_3566708_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3567638_3568511_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3568507_3569458_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3569556_3570507_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP013883	Bordetella pertussis strain I093 chromosome, complete genome	4101532	3702629	3834495	4101532	transposase,integrase,tRNA	uncultured_Mediterranean_phage(10.34%)	112	3748322:3748339	3790852:3790869
WP_010929577.1|3702629_3703580_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3703679_3704630_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929878.1|3704626_3705262_-	LysE family transporter	NA	NA	NA	NA	NA
WP_003818466.1|3705391_3706291_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003807278.1|3706386_3706878_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_010929877.1|3706924_3707890_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929876.1|3709023_3710265_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_003807287.1|3710378_3711395_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929875.1|3711429_3711906_-	membrane protein	NA	NA	NA	NA	NA
WP_003807291.1|3712048_3712957_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929874.1|3713070_3714183_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_023853429.1|3714283_3714769_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818477.1|3714905_3716156_+	kynureninase	NA	NA	NA	NA	NA
WP_003807300.1|3716257_3716770_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_005013747.1|3716868_3717819_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929873.1|3717884_3718823_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_010929872.1|3718845_3719472_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_003818481.1|3719468_3720125_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929871.1|3720121_3720724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929870.1|3720730_3721318_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.1e-07
WP_010929869.1|3721498_3722068_+	bacterioferritin	NA	NA	NA	NA	NA
WP_003807313.1|3722138_3723458_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_003807315.1|3723564_3723756_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010929868.1|3724007_3725297_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929867.1|3725451_3726447_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807322.1|3726531_3727206_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3727202_3728153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816336.1|3728314_3729556_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_010929866.1|3729552_3730497_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_005012067.1|3730615_3731566_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853484.1|3731525_3732455_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807759.1|3732508_3732844_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010929865.1|3732888_3733653_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929864.1|3733676_3734417_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929863.1|3734424_3735978_-	acyl--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	1.5e-13
WP_010929862.1|3736012_3736990_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023853476.1|3737262_3737844_-	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_094145972.1|3737895_3744798_-	autotransporter BatB	NA	NA	NA	NA	NA
WP_003807750.1|3745244_3745376_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_010929858.1|3745641_3745848_-	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
WP_010929857.1|3746852_3747512_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010929856.1|3747539_3748685_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
3748322:3748339	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_003807743.1|3748825_3749161_+	YegP family protein	NA	NA	NA	NA	NA
WP_010929855.1|3749235_3750096_-	hypothetical protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
WP_010929854.1|3750359_3751061_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019248860.1|3751230_3751626_+	RidA family protein	NA	NA	NA	NA	NA
WP_005013747.1|3751735_3752686_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929850.1|3752721_3753189_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010926411.1|3753422_3753800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926410.1|3753796_3753979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929849.1|3753982_3754969_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010929848.1|3754965_3755613_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929847.1|3755670_3756198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247983.1|3756234_3757419_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929845.1|3757429_3757771_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_010926403.1|3757883_3758084_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|3758080_3759070_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010929841.1|3760556_3762527_-	DUF3220 domain-containing protein	NA	NA	NA	NA	NA
WP_003814626.1|3762768_3763167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929840.1|3763175_3764099_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3764556_3765507_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927254.1|3765737_3767429_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_003816027.1|3767477_3767750_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_003816026.1|3767746_3768118_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|3768213_3768348_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_010929554.1|3768753_3770163_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_010929839.1|3770165_3771275_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929838.1|3771369_3773823_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_023853625.1|3773941_3774733_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929836.1|3774852_3776280_+	amidase	NA	NA	NA	NA	NA
WP_010929835.1|3776318_3777290_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929834.1|3777708_3778872_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929833.1|3778959_3779805_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3781361_3782312_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|3782866_3783241_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|3783315_3784374_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|3784397_3785348_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929808.1|3788229_3789399_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_003815953.1|3789499_3791107_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
3790852:3790869	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_010929810.1|3791153_3793175_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815955.1|3793203_3793449_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_004565905.1|3793462_3794653_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_010929811.1|3794848_3795814_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929812.1|3795836_3796976_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929813.1|3797187_3798150_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929814.1|3798273_3800298_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929815.1|3800494_3802738_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_003815964.1|3803016_3803475_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929816.1|3804402_3807024_-	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_010929817.1|3807087_3809715_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929818.1|3809866_3810931_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699616.1|3810930_3811701_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929819.1|3811709_3812543_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818225.1|3812555_3813335_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|3813408_3814842_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929821.1|3814869_3815628_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853380.1|3815683_3817525_-	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929823.1|3817627_3818104_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853391.1|3818120_3819041_-	bestrophin	NA	NA	NA	NA	NA
WP_003818232.1|3819147_3819648_+	SET domain-containing protein	NA	NA	NA	NA	NA
WP_010929826.1|3820021_3820714_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_010929591.1|3821022_3821973_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931556.1|3821969_3825743_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010931557.1|3826079_3827969_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931558.1|3827980_3828874_+	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931559.1|3828977_3829775_+	thiazole synthase	NA	NA	NA	NA	NA
WP_010931560.1|3829771_3830623_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003817656.1|3830684_3831365_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_019248789.1|3831401_3831728_+	TolC family protein	NA	NA	NA	NA	NA
WP_019247190.1|3831728_3832688_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_003815102.1|3832708_3833197_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_010931561.1|3833478_3834495_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
