The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	27282	70036	4104135	transposase,tRNA	Synechococcus_phage(50.0%)	42	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	77634	136108	4104135	transposase,tRNA	Planktothrix_phage(22.22%)	53	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|101866_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132700_132985_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	164893	225404	4104135	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169079_170510_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170543_171173_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176986_177802_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181336_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182425_184330_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184326_188001_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188632_189055_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189082_189502_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189530_189977_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190755_193026_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193101_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195458_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197378_198479_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198560_198935_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198994_201859_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205635_206586_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206742_207066_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207170_208211_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208216_208996_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211224_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219054_221898_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	233336	286924	4104135	transposase,tRNA,protease	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235320_236271_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238116_238527_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240335_241379_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241549_243652_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251623_253513_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253599_254238_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254380_255766_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|265573_266524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|267754_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274127_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277140_278091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|278077_278293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279655_280267_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|280425_281274_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281299_282682_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284840_285977_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285973_286924_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	390857	448366	4104135	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390857_391808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391944_392862_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392858_393107_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393103_394309_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394381_395377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395399_396620_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396616_397261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398991_399801_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400105_401059_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401157_402141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403584_404763_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404930_406637_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407570_409160_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410270_410870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411330_412311_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412386_413337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413425_414340_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414336_414996_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415085_416009_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416014_416470_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417528_417798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077108689.1|417757_419377_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419373_420432_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421148_422126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423523_425035_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425050_426364_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426554_426734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427143_427878_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430322_431273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431404_431803_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432213_432684_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432772_433117_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433216_434617_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436405_436924_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437034_437790_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437985_439218_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439210_439996_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440062_441034_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441044_442022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442147_443320_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443346_444375_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444440_445634_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447415_448366_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	590420	651611	4104135	transposase,protease	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|590420_591371_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|591846_592737_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592733_593555_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593754_594246_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594264_595338_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595384_596488_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596563_597184_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597204_597714_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597768_598020_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598083_599217_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599224_599611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|599607_602127_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602555_602894_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602890_603397_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603458_604259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604369_605311_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605404_606940_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608619_610470_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610473_611307_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611306_612248_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|612499_613471_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613612_615901_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616207_617116_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617170_618136_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618210_619872_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|619943_620654_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|620802_621753_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622451_622835_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622892_623495_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623512_623914_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|624029_624941_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624937_625519_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626313_627048_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627088_628138_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628285_628864_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629250_630228_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630321_634716_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634916_635765_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635923_636736_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636791_637742_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|637840_638641_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638702_639086_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|639097_640450_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|640737_641067_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|641069_641819_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|642001_642922_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642968_643181_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643203_643626_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|643642_644743_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644839_646357_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646432_647272_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|647293_648166_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648256_649351_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649644_650595_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650669_651611_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	656935	703126	4104135	terminase,tail,transposase,tRNA	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|656935_657961_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|658001_658241_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658310_659900_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659899_660448_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660528_661101_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661119_662031_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662104_663073_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663195_664269_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664273_666094_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|666170_667121_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|667209_667545_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667678_668329_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668350_669769_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669838_670594_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670562_671321_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671331_672213_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672229_672937_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672939_673698_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673907_675650_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675642_676167_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676206_677001_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677168_678242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678340_679291_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|679542_679749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679820_680432_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|680986_681238_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|681230_681920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682176_683127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|683766_684252_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|684238_685516_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685518_686937_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686965_688021_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688026_688269_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688391_688994_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|689422_690373_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|691047_691299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|691361_691844_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|691857_692046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|692045_692441_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|692437_692836_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|692832_693255_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|693262_693763_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|694017_694536_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|694545_694875_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|694892_695183_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|695208_697821_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|697830_698190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|698257_698791_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|698787_699177_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|699169_703126_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	709292	763222	4104135	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|709292_711023_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|711075_711504_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|711506_712187_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|712186_712645_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|712681_713656_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|713672_714989_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|715020_715518_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|715604_716294_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|716293_717343_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|717339_718134_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|718302_718653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|718628_719186_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|720315_721266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|723403_724633_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|724635_726078_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|726182_727328_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|727359_728157_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|728181_729741_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|729737_732110_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|732219_733323_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|733322_734015_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|734158_734860_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|734844_735222_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|735953_736904_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|737063_737936_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|738276_738495_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|738534_739914_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|739955_741353_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|741392_743045_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|743048_743933_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|743932_744874_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|744952_746572_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|746738_747554_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|747621_748191_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|748191_749142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|749796_750894_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|750927_752193_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|752350_753301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|753544_754135_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|754150_756595_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|756714_757686_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|757817_758342_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|758301_759252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|759473_761669_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|761741_762149_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|762271_763222_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	885811	953787	4104135	transposase	Bacillus_phage(33.33%)	56	NA	NA
WP_023994644.1|885811_886828_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|887024_888008_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|889606_890995_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|891025_892015_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|892125_893358_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|893639_894440_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|894462_896694_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|897481_897928_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|897949_898696_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|898839_899817_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|900450_901062_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|901055_902273_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|902413_903364_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|903360_904080_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|904200_906360_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|906450_906720_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|906808_907015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|907013_907541_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|907559_908339_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|908506_909523_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|909595_910087_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|910097_911813_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|912976_913927_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|913923_915756_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|916154_916814_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|917341_918022_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|918303_919020_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|919034_920336_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|922480_925369_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|925592_926945_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|926973_927495_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|927491_928946_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|928980_929229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|929334_930210_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|930235_931291_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|931303_932095_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|932127_933498_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|934674_935625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935677_935899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936058_936271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936390_937509_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|937605_937821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|938014_938266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938378_939329_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|939325_939709_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|939763_941578_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|941727_942555_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|942600_943581_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|943577_943790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|943786_944968_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|945131_945866_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|945867_948480_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|948615_950529_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|951144_951555_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|951652_952738_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|952836_953787_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	997321	1069838	4104135	transposase,tRNA	Enterococcus_phage(14.29%)	60	NA	NA
WP_005012067.1|997321_998272_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|998376_999426_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|999563_1000580_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1002088_1002661_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1002720_1003452_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1003503_1004421_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1005228_1008408_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1008404_1009787_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1009856_1010108_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1010253_1010868_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1011054_1013115_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1013244_1014096_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1014092_1014719_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1014715_1016470_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1016762_1019468_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1019480_1021142_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1021154_1022945_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1023166_1024342_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1024384_1025335_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1025433_1026174_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1026368_1028405_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1028422_1029433_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1029550_1030744_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1030773_1031547_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1031543_1032734_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1032759_1033698_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1033694_1036043_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1036197_1036839_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1038168_1038321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1038352_1038901_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1038919_1039405_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1039582_1040521_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1040523_1040841_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1040886_1041831_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1043511_1044162_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1044215_1044551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1044547_1045408_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1045424_1045706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1045779_1046043_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1046286_1047237_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1047535_1048273_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1048708_1049032_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1049066_1049627_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1049747_1050623_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1050635_1051583_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1051684_1051978_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1052004_1054062_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1054076_1054577_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1054650_1056357_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1057220_1058273_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1058325_1058715_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1058723_1059356_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1059455_1060472_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1061302_1062310_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1062306_1063950_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1063946_1064834_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1064974_1065448_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1065437_1066460_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1066456_1067884_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1068821_1069838_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1073591	1134618	4104135	holin,transposase,tRNA	Catovirus(20.0%)	50	NA	NA
WP_010930155.1|1073591_1074728_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1074724_1075798_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1075955_1077392_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1077482_1078124_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1078459_1079476_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1082622_1084044_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084307_1085024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085108_1085426_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085466_1085880_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085881_1086241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086283_1087828_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087911_1088742_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088776_1089931_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089973_1090846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090962_1093251_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094457_1094922_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1094948_1095899_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1096266_1097043_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1097087_1097945_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1097966_1098983_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1099117_1100158_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1100352_1102434_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1102669_1104163_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1104393_1105188_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1105408_1106767_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1106763_1107606_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1107624_1109511_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1109452_1109704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1109748_1110381_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1110399_1111002_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1111153_1112104_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1112684_1113392_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1113750_1114737_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1114876_1115890_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1115886_1116837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1116949_1117408_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1117444_1118758_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1118775_1119147_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1119143_1120607_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1120747_1121476_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1121457_1124307_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1124519_1125470_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1125637_1126462_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1126461_1127340_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1128244_1129360_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1129388_1130183_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1130179_1132045_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1132123_1132756_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1132752_1133055_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1133097_1134618_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 12
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1152188	1217771	4104135	transposase,tRNA	Erysipelothrix_phage(33.33%)	52	NA	NA
WP_023853221.1|1152188_1153985_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1153984_1154953_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1155022_1155868_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1155935_1156490_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1156536_1157487_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1157585_1158218_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1158381_1160664_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1160818_1163515_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1163640_1164129_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1166539_1169410_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1169455_1170670_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1170899_1172327_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1172424_1173516_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1173528_1174287_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1174374_1175277_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1175273_1176224_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1176353_1177337_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1177391_1178114_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1179592_1180948_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1181028_1183404_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930213.1|1183568_1185644_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_033446255.1|1185705_1186500_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1186607_1187570_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1187557_1188313_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1188420_1190058_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1190125_1190863_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1190965_1191541_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1191713_1192250_+	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|1192282_1192597_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1192612_1193458_+	membrane protein	NA	NA	NA	NA	NA
WP_003821443.1|1193496_1194876_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1194953_1195835_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1195933_1196884_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1196880_1197291_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1197398_1198253_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1198245_1199208_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1199253_1200378_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1200483_1201362_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1201486_1202266_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1202419_1203841_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1204275_1205973_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1206199_1207141_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1207467_1208214_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1208221_1209148_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1209269_1210187_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1210226_1211180_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1211204_1211783_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1213456_1214065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1214142_1214496_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1214579_1215569_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_076879566.1|1215771_1216722_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853639.1|1216820_1217771_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1316907	1385394	4104135	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1316907_1317858_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1318626_1319265_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1320154_1320601_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1320682_1321384_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1321384_1322152_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1322148_1323387_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1323386_1324313_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1324415_1325531_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1325546_1326497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1326850_1327432_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1327428_1328262_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1328472_1329786_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1329962_1330844_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1330863_1331715_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1331767_1332856_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1332966_1334094_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1334328_1334940_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_005012808.1|1335038_1335989_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1336210_1336588_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1336735_1337233_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1337229_1337757_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1337890_1338706_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1338718_1339900_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1339947_1340841_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1340967_1341438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1341563_1342391_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1342419_1343196_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1343192_1343468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1343482_1343947_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1343958_1344660_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1344769_1345270_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1345352_1346531_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1348158_1348494_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1348681_1350130_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1350187_1350532_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1350638_1351178_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1351270_1352221_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1352319_1352727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1352959_1353391_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1353572_1353977_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1355213_1355537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1355539_1356427_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1356459_1356885_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1356956_1357310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1357549_1358056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1358094_1359426_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1359485_1360301_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1360297_1361152_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1364214_1366758_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1368124_1369879_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1369875_1371996_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1372000_1374196_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1374192_1377534_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1380336_1381287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1381352_1381532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1381648_1382404_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1382390_1383536_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1384443_1385394_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1445885	1501373	4104135	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1445885_1446836_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1448037_1448484_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1448476_1449952_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1449948_1450704_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1450696_1451707_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1451696_1453373_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1453685_1454018_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1454031_1454427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1454436_1454763_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1454759_1455086_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1455012_1456035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1456031_1456382_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1456429_1456858_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1456865_1458239_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1458379_1458757_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1459019_1460327_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1460387_1461218_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1461214_1461703_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1461744_1463265_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1463308_1463785_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1464588_1467186_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1467215_1468037_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1468763_1469513_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1469696_1470575_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1470672_1471389_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1471403_1471964_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1472130_1472895_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1472914_1473772_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1473768_1474968_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1475007_1476342_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1476394_1478731_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1478856_1479420_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1479428_1480520_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1480591_1481047_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1481047_1481842_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1481838_1483020_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1483006_1483612_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1483608_1484382_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1484393_1485221_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1485382_1487746_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1487813_1488533_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1488656_1489082_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1489116_1490067_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1490184_1491111_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1491176_1492334_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1492314_1492782_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1492929_1493880_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1493896_1494331_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1494320_1494671_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1494867_1496022_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1496018_1497191_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1497238_1498132_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1498177_1498615_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1498674_1499364_+	VIT family protein	NA	NA	NA	NA	NA
WP_010929577.1|1499373_1500324_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1500422_1501373_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1596070	1664157	4104135	transposase,tRNA	Streptococcus_virus(11.11%)	57	NA	NA
WP_010930416.1|1596070_1596559_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1596676_1597255_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1597360_1597729_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1597827_1598778_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1598784_1599897_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1600583_1601786_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1601989_1604650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1604662_1608067_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1608734_1610960_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1611006_1611333_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1611383_1611992_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1612090_1613041_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1613110_1613875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1613871_1614408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1614574_1615426_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1615485_1616112_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1616108_1617059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1617157_1618270_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1618259_1619261_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1619366_1620878_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1620874_1622179_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1622290_1622851_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1623118_1623673_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1624128_1624344_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1624598_1627196_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1627192_1628380_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1629039_1629654_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1629742_1630864_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1630881_1631787_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1632679_1633630_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1633811_1634564_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1634632_1635292_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1635288_1636017_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1636029_1638309_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1638333_1638537_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1638578_1639211_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1639346_1640264_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1640260_1640974_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1641211_1641982_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1641986_1642586_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1642830_1644321_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1644379_1644664_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1645229_1646156_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1646292_1647033_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1647199_1648576_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1648757_1649663_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1651314_1653117_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1653234_1653885_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1653983_1654934_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1654955_1656176_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1656361_1657774_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1657837_1658905_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1658904_1660392_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1660401_1661346_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1661505_1662204_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1662281_1663187_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1663206_1664157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1700106	1755697	4104135	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1700106_1701057_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1701115_1701889_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1701881_1703438_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1703434_1704385_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1705711_1706314_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1706553_1707255_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1707248_1708031_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1708215_1709166_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1709264_1710002_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1710191_1710950_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1710996_1711986_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1712163_1713132_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1714671_1715640_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1715648_1716590_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1717063_1718074_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1718064_1719579_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1719575_1720922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1720924_1721959_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1722008_1723634_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1724186_1725137_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1725241_1726189_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1726242_1728057_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1728049_1728724_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1728853_1731928_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1731941_1732241_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1732555_1733179_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1733422_1734292_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1734269_1735214_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1735299_1736226_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1736338_1737118_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1737108_1738305_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1738335_1739286_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1739507_1740197_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1740261_1741017_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1741068_1742061_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1742070_1743024_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1743139_1744102_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1745503_1745932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|1745928_1746879_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1747172_1747895_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1748333_1749521_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1749524_1749875_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1751624_1752596_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1752609_1753323_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1753327_1754245_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1754351_1754648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1754746_1755697_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	1988461	2058113	4104135	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1988461_1991119_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1991196_1992399_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1992395_1992908_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1993030_1993468_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1993744_1994695_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1994793_1995744_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|1995907_1997803_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|1997916_1998084_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1998147_1998384_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_033446265.1|1998752_1999904_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2001467_2002418_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2002869_2003871_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2004043_2004901_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2004897_2006160_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2006260_2006635_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010930713.1|2006707_2007895_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2007979_2008750_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2008863_2009628_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2009578_2010880_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|2010876_2011683_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|2013427_2014399_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2014555_2015068_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2015226_2016201_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2017201_2017996_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2018021_2018828_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2018938_2019529_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2019539_2020718_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2020820_2021195_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2021447_2022779_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2022845_2026076_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2027566_2028313_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2028397_2028859_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2028896_2029955_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2029917_2031747_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2031786_2032359_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2033783_2034605_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2034923_2036246_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2036605_2037241_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2037200_2038151_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2039021_2039894_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2039971_2041111_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2041469_2042726_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2042731_2043259_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2043263_2044082_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2044081_2044804_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2044825_2045140_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2045157_2046306_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2046336_2047212_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2047208_2048528_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2048600_2049797_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2049807_2051295_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2053889_2054789_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2054926_2055892_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2055990_2056941_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2057162_2058113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2069609	2119005	4104135	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2069609_2070560_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2071697_2071994_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2072168_2073521_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2073663_2074680_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2076659_2077673_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2077759_2078665_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2078821_2079166_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2079323_2079782_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2079795_2082012_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2082008_2083070_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2083098_2084073_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2084024_2084843_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2084855_2085464_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2085638_2086034_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2086052_2087492_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2087520_2087868_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2087886_2088837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2089489_2090440_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2090523_2092341_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2092414_2093062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2093074_2094004_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2094173_2094638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2094885_2095566_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2095614_2097306_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2097321_2097873_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2097869_2098241_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2098353_2099190_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2099200_2099725_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2099822_2100002_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2100131_2101106_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2101236_2101593_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2101582_2102458_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2102556_2103441_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2103462_2104758_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2105706_2106357_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2106444_2107965_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2108222_2110088_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2111133_2112084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2112101_2112242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2113056_2113416_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2113403_2114840_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2114836_2115490_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2115486_2116680_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2116783_2118058_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2118054_2119005_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2130209	2198585	4104135	transposase,tRNA,protease	Klosneuvirus(22.22%)	59	NA	NA
WP_005013747.1|2130209_2131160_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2131119_2131533_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2131817_2132117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2132526_2134809_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2135274_2135469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2135494_2137525_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2137544_2137757_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2138034_2138574_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2138687_2139983_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2140059_2141217_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2141400_2142300_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2142318_2143623_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2143588_2144695_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2144782_2145019_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2145157_2146228_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2146231_2147587_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2147613_2148771_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2148776_2149415_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2149416_2150712_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_033446257.1|2150761_2152048_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2152063_2152570_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2152566_2153715_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2153742_2154168_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2154490_2157373_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2157465_2158221_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2158986_2160336_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2160434_2161385_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2161483_2162434_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2162507_2162981_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2163006_2164215_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2164211_2164985_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2164984_2165608_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2165773_2166034_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2166337_2166919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2166985_2167240_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2167226_2169851_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2169922_2170741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2170737_2171343_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2171380_2172514_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2174229_2174604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2174701_2175976_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2175979_2177557_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2178463_2179819_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2179815_2181450_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2181442_2182273_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2182290_2183235_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2183287_2184862_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247553.1|2184909_2185269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2185261_2185582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2185697_2186630_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2186732_2187689_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2187838_2189176_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2189180_2190437_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2190632_2191679_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2191736_2192105_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2192235_2193108_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2193184_2194087_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2195143_2196361_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2197634_2198585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2251919	2309198	4104135	transposase,tRNA	Synechococcus_phage(14.29%)	49	NA	NA
WP_005012067.1|2251919_2252870_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2252968_2254963_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2255022_2255988_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2255977_2258839_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2258841_2259348_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2259452_2260661_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2260662_2261601_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2261762_2262236_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2262232_2263183_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2263293_2263734_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2263862_2265092_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2265130_2265952_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2266005_2267157_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2267248_2267737_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2270287_2272837_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2272907_2275481_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2275746_2275947_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2275978_2276140_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2276197_2276536_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2276684_2277635_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2278409_2279078_+	arylesterase	NA	NA	NA	NA	NA
WP_010930531.1|2279059_2281015_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_004568486.1|2281257_2282007_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2282019_2282883_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2282886_2284302_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2284435_2285164_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2285302_2285503_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2285678_2286077_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2286100_2287501_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2287619_2288372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816527.1|2288660_2289338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2289364_2290144_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2290140_2291025_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2291042_2291822_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2291806_2292565_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_023852762.1|2292702_2293338_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2293605_2294622_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2294719_2295760_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2295894_2297187_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2298546_2298930_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2298947_2299535_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_010930048.1|2299572_2300523_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930801.1|2300621_2301182_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930802.1|2301178_2301724_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003818661.1|2301919_2302948_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930803.1|2302988_2304329_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818658.1|2304437_2305442_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930804.1|2305548_2308149_+	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_010930522.1|2308247_2309198_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2348311	2411889	4104135	transposase,protease	uncultured_Caudovirales_phage(11.11%)	48	NA	NA
WP_010931070.1|2348311_2349262_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2349563_2350040_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2350663_2352301_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2352331_2353645_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2353778_2354096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2354196_2355519_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2355515_2356466_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2356564_2357515_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2358044_2359067_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2359095_2359926_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2359942_2361640_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2361704_2362781_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2362940_2363804_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2363834_2364404_+	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930841.1|2364420_2365272_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2366329_2367211_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2367285_2368275_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2368337_2369288_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2369350_2370208_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2370267_2370756_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2372328_2373519_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2373515_2375102_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2375120_2376188_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2376292_2377837_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2378256_2379831_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023997180.1|2379947_2380955_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2380951_2381791_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2381795_2383433_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2383429_2384380_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930851.1|2384522_2385797_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2385826_2386117_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2386189_2387203_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2387222_2388485_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2388487_2389411_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2389407_2390901_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2390911_2391844_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2392025_2393351_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930859.1|2393385_2394741_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_023853666.1|2394801_2396322_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930861.1|2396476_2397208_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853662.1|2397305_2398616_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2398631_2399543_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2399533_2400127_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2400188_2400575_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2400586_2401057_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2401068_2401692_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2401712_2404460_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2410938_2411889_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2683875	2724544	4104135	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2683875_2684826_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2684936_2685119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2685218_2685815_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2685998_2687090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2687589_2688000_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2688058_2688388_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2688405_2690823_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2690835_2691858_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2691932_2692292_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2692307_2692505_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2692840_2693791_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2693985_2694435_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2694431_2695382_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2695492_2696941_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2697055_2697301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2697440_2698391_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2698635_2699349_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2699471_2699699_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2699993_2700632_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2700740_2701775_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2701771_2702722_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2703137_2703662_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2703665_2703935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2704133_2705195_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2705278_2706913_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2706914_2707718_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2707746_2708706_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2708709_2710224_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2710260_2711265_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2711696_2712167_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2712202_2712814_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2712844_2713468_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2713548_2715081_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2715115_2716333_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2716400_2717432_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2717428_2718598_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2718591_2719272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2719433_2720276_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2720438_2721410_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2721581_2722460_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2722482_2723553_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2723593_2724544_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2780009	2852879	4104135	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2780009_2780426_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2780536_2781169_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2781197_2781641_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2781662_2782754_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2782808_2783609_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2783744_2784365_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2784504_2784978_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2786117_2787068_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2787064_2794726_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2794966_2799013_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2799325_2799907_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2799903_2801202_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2801281_2802310_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2802570_2803521_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2803517_2804468_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2804784_2805390_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2805443_2806757_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2806831_2807302_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2807301_2808090_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2808100_2809753_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2809840_2810791_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2811952_2812459_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2812455_2813220_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2813235_2813520_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2813584_2814574_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2814745_2815675_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2815646_2816333_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2816366_2816912_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2816956_2818222_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2818218_2819121_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2820302_2821247_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2821341_2822859_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2822900_2824529_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2824636_2825518_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2828630_2829005_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2829029_2829368_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2829411_2831046_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2831084_2832431_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2832538_2833960_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2834029_2834614_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2834716_2835667_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2835801_2836908_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2836918_2838016_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2838160_2839366_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2839372_2839894_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2839890_2840373_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2840378_2840630_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2840610_2841096_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2841231_2844693_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2844710_2845595_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2845604_2846036_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2846282_2846786_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2846863_2848264_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2848338_2849214_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2849210_2850218_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2850685_2850991_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2851081_2851672_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2851862_2852879_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2856022	2922832	4104135	transposase,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
WP_023995489.1|2856022_2856973_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2857071_2858022_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2858018_2858813_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2858844_2859549_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2859623_2860424_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2860420_2860828_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2860824_2861466_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2861458_2863459_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2864719_2866051_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2866047_2866998_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2868704_2868971_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2869678_2870017_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2874569_2875172_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2875268_2876558_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2876615_2877347_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2877343_2878147_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2878143_2879232_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2879228_2880158_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2880306_2881452_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2881473_2882424_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2882754_2886576_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2886732_2887401_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2887405_2889079_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2889097_2890417_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2890421_2892737_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2892792_2894961_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2894957_2900138_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2900236_2900551_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2900778_2901024_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2901118_2901637_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2901736_2902942_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2903057_2904455_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2904571_2905150_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2905222_2906614_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2906781_2907732_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2908012_2908633_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2908629_2909043_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2909039_2910083_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2910138_2910327_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2910336_2911101_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2911191_2911848_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2911939_2912698_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2912723_2914325_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2914525_2915530_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2915630_2915894_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2916011_2916788_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2917378_2918329_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2920712_2921825_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|2921881_2922832_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	2953218	2996909	4104135	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2953218_2954169_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2954289_2955186_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2957463_2959689_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2959853_2960942_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2960898_2961552_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2961599_2962397_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2962928_2963879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2963959_2965108_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2965164_2966115_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2966213_2966519_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2966547_2966982_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2966983_2968228_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2968224_2968935_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2968949_2969861_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2970223_2970628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2970624_2971083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2971089_2971998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2971994_2972861_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2972847_2973675_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2973685_2974813_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2975890_2977129_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2977170_2978433_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2978439_2979192_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2979243_2979429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2979704_2980169_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2980200_2980860_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2981004_2983113_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2983109_2984060_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2984163_2984784_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2984887_2985628_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2986762_2987887_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2987932_2988301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2988542_2989493_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2990528_2991071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|2991456_2992407_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2992403_2993312_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2993438_2994275_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2994787_2995897_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2995958_2996909_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	3378952	3432693	4104135	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_077069052.1|3378952_3379903_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3380307_3380952_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3380976_3381561_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3381661_3382279_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3382281_3383997_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3383993_3384302_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3384318_3384936_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3384980_3385283_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3385383_3386238_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3386425_3386650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3386819_3387092_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3387509_3387917_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3388286_3389081_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3389181_3390417_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3390485_3391502_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3391513_3392890_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3392886_3394083_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3394079_3395618_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3395614_3396874_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3398814_3399765_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3400531_3401626_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3401618_3402953_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3402906_3403590_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3403615_3404779_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3404775_3405777_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3405776_3406649_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3406645_3407395_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3407391_3408183_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3408179_3409319_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3409594_3410380_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3410413_3411196_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3411199_3411589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3412728_3413592_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3413627_3414716_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3414712_3415663_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3416016_3418995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3419921_3420800_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3422748_3423699_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3423695_3424163_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3424205_3424976_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3424996_3425797_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3425807_3427217_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3427311_3428097_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3428336_3429353_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3429460_3429853_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3429990_3430671_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3430675_3431647_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3431742_3432693_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	3438848	3498148	4104135	transposase,tRNA	Acinetobacter_phage(27.27%)	47	NA	NA
WP_003820957.1|3438848_3440612_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3440723_3441602_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3441714_3442530_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3442533_3442785_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3442869_3443886_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3444216_3444438_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3446798_3447716_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3448213_3449422_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3449501_3451073_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3451190_3452126_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3452314_3453259_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3453826_3459544_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3459549_3460677_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3460732_3461359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3461630_3462647_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3462742_3463453_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3463449_3464439_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3464534_3466166_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3466168_3466906_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3467061_3467934_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3468283_3469423_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3469419_3470079_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3470150_3470783_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3470812_3471331_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3471341_3472451_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3472497_3473352_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3473353_3474256_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929969.1|3475478_3476429_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3478185_3479175_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3479350_3480139_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3480135_3481167_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3481185_3481749_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3481804_3483325_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3483588_3484293_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3484300_3485029_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3485143_3485518_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3485560_3486850_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3486846_3488016_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3488012_3488852_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3488911_3489847_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3489859_3490810_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3490908_3491871_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3491902_3492262_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3492386_3493289_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3493290_3495063_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3495097_3495874_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3497197_3498148_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP013084	Bordetella pertussis strain H698 chromosome, complete genome	4104135	3513086	3571159	4104135	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3513086_3514037_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3514165_3515299_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3515342_3516248_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3516250_3517951_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3517947_3518868_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3518875_3519853_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3519911_3520946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3522920_3523157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3523283_3524147_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3524235_3525057_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3525136_3525874_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3525870_3526863_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3527015_3527639_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3527683_3528832_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3531155_3532106_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3532446_3533397_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|3533495_3534446_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3534742_3535240_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3535282_3537058_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3537065_3537932_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3537938_3538673_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3539842_3540637_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3540926_3541517_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3541550_3542879_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3542953_3544099_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3544210_3545209_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3545171_3545606_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3547122_3548007_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3548003_3549209_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3549205_3550066_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3550178_3551969_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3552009_3552654_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3552675_3552984_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3553149_3554436_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3555869_3556820_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3558771_3559986_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3560091_3561081_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3561077_3561686_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3561698_3562328_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3562324_3562945_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3562976_3563768_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3564619_3565075_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3565093_3566020_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3566073_3567360_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3568290_3569163_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3569159_3570110_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3570208_3571159_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
