The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	0	59497	4122649	tRNA,transposase	Natrialba_phage(12.5%)	52	NA	NA
WP_010929569.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_019247667.1|5124_5910_+	asparaginase	NA	NA	NA	NA	NA
WP_019247666.1|5943_6126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003806883.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|20126_20531_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|20771_21947_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|24352_25459_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|26470_27286_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_005012808.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|35674_36625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|36621_37812_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|38061_38973_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|38974_41113_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|41109_41649_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|41652_42381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|42367_43261_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|43331_43727_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|43736_44267_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010930208.1|44712_45663_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|46249_46798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|46769_47006_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|47133_48027_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51190_52141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52183_53440_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56026_56716_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58546_59497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	70134	123122	4122649	tRNA,transposase	Planktothrix_phage(20.0%)	51	NA	NA
WP_005012808.1|70134_71085_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|71178_71493_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|72685_74593_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|75406_75988_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|76076_76328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|76329_77172_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|77277_78687_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|78683_79634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|80649_82524_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|83871_84576_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|84572_85745_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|85940_86534_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|86530_87763_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|87780_89040_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|89063_90152_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|90159_91260_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|91263_91839_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|91842_92895_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|95337_95493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|97258_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|98388_99228_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|100160_100763_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|102882_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|103857_104133_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|104140_104803_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|108476_109427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111601_112231_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929632.1|115993_117010_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122171_123122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	165941	304070	4122649	tRNA,transposase,protease	Klosneuvirus(10.53%)	117	NA	NA
WP_005015810.1|165941_166892_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168335_169238_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169215_169845_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170127_171558_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171591_172221_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172269_173877_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173901_174585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174666_175143_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|175349_176300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177415_177943_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178034_178850_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178910_179645_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179682_181761_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182010_182283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182384_183470_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183473_185378_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|185374_189049_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189109_189673_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189680_190103_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|190130_190550_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|190578_191052_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|191151_191649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191803_194074_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|194122_195355_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929673.1|196507_197143_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_010929674.1|197139_198033_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198427_199528_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199609_199984_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200043_202908_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203052_203793_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203862_205074_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205102_206071_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|206684_207635_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207791_208115_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208219_209260_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|209265_210045_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210090_210387_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210412_210688_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210744_211389_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211388_212075_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|212204_213056_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213106_213832_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213863_215213_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215324_216257_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|216714_219510_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|220103_223046_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223117_223837_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223875_224424_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224578_225478_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225502_226453_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|226671_227367_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|227383_228796_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|228908_230339_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|230380_232294_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|232612_233179_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|233269_234271_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_005012067.1|234385_235336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235422_236373_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|236369_237320_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|237418_238216_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|239165_239576_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|240597_241341_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|241384_242428_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|242598_244701_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|246111_247068_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|247086_247578_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|247574_248930_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|248930_249629_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|249625_250327_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|250579_251629_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|251734_252676_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252672_254562_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|254648_255287_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|255429_256815_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256745_257282_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257433_258825_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258841_259822_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259957_260941_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261005_261905_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262011_263766_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263773_264898_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264911_265892_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|266622_267573_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268132_268678_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|268761_270381_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270396_271551_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271564_271690_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271686_273438_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273434_275114_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275176_275725_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276867_277146_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|278189_279140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|279417_279579_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|279586_279727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|280245_280695_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|280704_281316_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|281474_282329_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|282348_283731_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|283795_284437_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|284576_285035_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|285059_285836_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|285889_287026_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|287022_287973_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807705.1|288071_288698_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_003807706.1|288720_289647_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003819100.1|289655_291242_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929723.1|291238_292243_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003807710.1|292442_293303_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|293334_294336_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003819104.1|294406_295216_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003819105.1|295293_297153_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_010929725.1|297281_298484_-	MFS transporter	NA	NA	NA	NA	NA
WP_004566082.1|298597_299479_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004566083.1|300981_301542_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_005013747.1|301601_302552_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|302743_303031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|303119_304070_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	391907	449416	4122649	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|391907_392858_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|392994_393912_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|393908_394157_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|394153_395359_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|395431_396427_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|396449_397670_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|397666_398311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929483.1|400041_400851_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|401155_402109_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|402207_403191_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|403117_403819_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|403867_404638_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|404634_405813_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|405980_407687_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|407683_408580_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|408620_410210_-	rhodanese homology domain-containing protein	NA	NA	NA	NA	NA
WP_003807867.1|410259_411252_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|411320_411920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|412380_413361_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|413436_414387_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|414475_415390_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|415386_416046_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|416135_417059_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|417064_417520_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|417516_418620_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734664.1|418575_418848_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|418807_420427_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|420423_421482_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|421611_422106_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|422198_423176_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|423371_424577_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|424573_426085_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|426100_427414_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|427604_427784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|428193_428928_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|431372_432323_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|432454_432853_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|433263_433734_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|433822_434167_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|434266_435667_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|437455_437974_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|438084_438840_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|439035_440268_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|440260_441046_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|441112_442084_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|442094_443072_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|443197_444370_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|444396_445425_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|445490_446684_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|448465_449416_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	590421	651609	4122649	transposase,protease	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|590421_591372_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|591868_592738_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592734_593556_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593752_594244_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594262_595336_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595382_596486_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596561_597182_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597202_597712_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597766_598018_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598081_599215_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599222_599609_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|599605_602125_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602553_602892_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602888_603395_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603456_604257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604367_605309_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605402_606938_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608617_610468_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610471_611305_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611304_612246_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|612497_613469_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613610_615899_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616205_617114_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617168_618134_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618208_619870_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|619941_620652_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|620800_621751_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622449_622833_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622890_623493_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623510_623912_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|624045_624939_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624935_625517_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626311_627046_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627086_628136_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628283_628862_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629248_630226_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630319_634714_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634914_635763_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635921_636734_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636789_637740_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|637838_638639_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638700_639084_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|639095_640529_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|640735_641065_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|641067_641817_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|641999_642920_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642966_643179_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643201_643624_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|643640_644741_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644837_646355_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646430_647270_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|647291_648173_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648254_649349_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649642_650593_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650667_651609_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	656933	704173	4122649	tRNA,transposase,tail,terminase	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|656933_657959_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|657999_658239_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658308_659898_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659897_660446_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660526_661099_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661117_662029_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662102_663071_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663193_664267_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664271_666092_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|666168_667119_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|667207_667543_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667676_668327_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668348_669767_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669836_670592_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670560_671319_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671329_672211_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672227_672935_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672937_673696_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673905_675648_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675640_676165_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676204_676999_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677166_678240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678338_679289_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|679540_679747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679818_680430_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|680984_681236_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|681228_681918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682174_683125_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033469562.1|683764_684250_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|684236_685514_+|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685516_686935_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686963_688019_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688024_688267_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688389_688992_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010929584.1|690469_691420_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|692094_692346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|692408_692891_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|692892_693093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|693092_693488_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|693484_693883_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|693879_694302_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|694309_694810_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|695064_695583_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|695592_695922_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|695939_696230_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|696255_698868_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|698877_699237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|699304_699838_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|699834_700224_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|700216_704173_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 7
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	815860	887873	4122649	transposase,holin	Acinetobacter_phage(20.0%)	60	NA	NA
WP_014486111.1|815860_816811_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930050.1|816909_817566_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930049.1|817713_820422_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_003813068.1|820431_821451_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930048.1|821447_822398_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813893.1|822496_822985_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_003813895.1|822981_823665_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010926959.1|823694_827150_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_010930046.1|827185_828046_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_010930045.1|828174_829092_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930044.1|829229_830210_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813904.1|830269_832060_+	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	2.0e-25
WP_010930042.1|832056_832833_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930041.1|832842_833361_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003813909.1|833473_835744_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010930039.1|835955_838187_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003813915.1|838487_838817_-	DUF2818 family protein	NA	NA	NA	NA	NA
WP_003813916.1|838833_840318_-	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
WP_019247436.1|840328_841831_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_010930037.1|841827_843840_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
WP_003813920.1|843857_844166_-	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
WP_003813921.1|844162_844810_-	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
WP_003813924.1|844827_845316_-	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA	NA
WP_003813926.1|845337_846411_-	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA	NA
WP_010930036.1|846410_848738_-	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
WP_003813930.1|848753_850121_-	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA	NA
WP_003813932.1|850117_850612_-	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
WP_010930035.1|850657_851914_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
WP_010926963.1|851916_852540_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
WP_003813941.1|852614_853091_-	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
WP_003813943.1|853127_853487_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
WP_010930034.1|853675_854833_-	porin	NA	NA	NA	NA	NA
WP_005012067.1|855145_856096_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|856113_856668_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|856669_857104_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|857100_857535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|857518_858322_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|858338_859154_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_020699608.1|859150_859966_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|860112_860814_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|860841_862800_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|862882_863833_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|864053_864722_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|864845_865952_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|865964_869078_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|869074_870568_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|870582_871254_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|871297_871792_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|871932_872580_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|872683_874732_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|874728_876741_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|876766_878101_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|878209_879202_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|879268_881353_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|881377_882349_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|882477_883509_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|883512_884664_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|884834_885758_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|885835_886660_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|886856_887873_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	895507	958596	4122649	transposase,holin	Bacillus_phage(25.0%)	53	NA	NA
WP_010930018.1|895507_897739_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|898526_898973_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|898994_899741_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|899884_900862_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|901495_902107_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|902100_903318_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|903458_904409_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|904405_905125_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|905245_907405_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|907495_907765_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003814003.1|908058_908586_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|908604_909384_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|909551_910568_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|910640_911132_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|911142_912858_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|914021_914972_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|914968_916801_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|917199_917859_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|917952_918099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|918207_918375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|918386_919067_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|919348_920065_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|920079_921381_-	phospholipase A	NA	NA	NA	NA	NA
WP_010930057.1|926645_927998_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|928026_928548_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|928544_929999_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|930033_930282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|930387_931263_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|931288_932344_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|932356_933148_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|933180_934551_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|935727_936678_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|936730_936952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|937111_937324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|937443_938562_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|939067_939319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|939431_940382_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|940378_940762_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|940816_942631_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|942780_943608_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|943653_944634_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|944630_944843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|944839_946021_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_010930070.1|946184_946919_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.6	3.8e-63
WP_077069141.1|946920_949533_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|949668_951582_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|952197_952608_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|952705_953791_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|953889_954840_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|954836_955811_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|955935_956847_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|957123_957516_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|957645_958596_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	999562	1069839	4122649	tRNA,transposase	Enterococcus_phage(14.29%)	59	NA	NA
WP_010929632.1|999562_1000579_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1002087_1002660_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1002719_1003451_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1003502_1004420_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1005227_1008407_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010930123.1|1009857_1010109_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1010254_1010869_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1011055_1013170_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1013245_1014097_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1014093_1014720_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1014716_1016471_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1016763_1019469_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1019481_1021143_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1021155_1022946_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1023167_1024343_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1024385_1025336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1025434_1026175_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1026369_1028406_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1028423_1029434_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1029551_1030745_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1030774_1031548_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1031544_1032735_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1032760_1033699_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1033695_1036044_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1036198_1036840_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1036943_1038077_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1038169_1038322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1038353_1038902_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1038920_1039406_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1039583_1040522_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1040524_1040842_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1040887_1041832_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930140.1|1041852_1043328_-	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_010930141.1|1043512_1044163_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1044216_1044552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1044548_1045409_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1045425_1045707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1045780_1046044_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1046287_1047238_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1047536_1048274_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1048709_1049033_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1049067_1049628_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1049748_1050624_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1050636_1051584_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1051685_1051979_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1052005_1054063_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1054077_1054578_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1054651_1056358_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1057221_1058274_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1058326_1058716_+	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1058724_1059357_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010929632.1|1059456_1060473_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930148.1|1061261_1062311_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1062307_1063951_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1063947_1064835_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1064975_1065449_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1065438_1066461_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1066457_1067885_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_062826590.1|1068822_1069839_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	1073592	1135639	4122649	tRNA,transposase,holin,protease	Catovirus(20.0%)	51	NA	NA
WP_010930155.1|1073592_1074729_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1074725_1075799_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1075956_1077393_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1077483_1078125_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930320.1|1078460_1079477_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930159.1|1079809_1082542_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1082608_1084030_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084293_1085010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085094_1085412_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085452_1085866_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085867_1086227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086269_1087814_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087897_1088728_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088762_1089917_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089959_1090832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090948_1093237_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094443_1094908_+	barstar family protein	NA	NA	NA	NA	NA
WP_010931070.1|1094934_1095885_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1095983_1096934_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1097301_1098078_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098122_1098980_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099001_1100018_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100152_1101193_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101387_1103469_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103704_1105198_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105428_1106223_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106443_1107802_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1107798_1108641_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108659_1110546_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1110487_1110739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1110783_1111416_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111434_1112037_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_076879620.1|1112188_1113139_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1113719_1114427_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1114785_1115772_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1115911_1116925_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1116921_1117872_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1117984_1118443_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1118479_1119793_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1119810_1120182_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_010930181.1|1120178_1121642_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1121782_1122511_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1122492_1125342_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1125554_1126505_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1126672_1127497_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1127496_1128375_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1129279_1130395_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1130423_1131218_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1131214_1133080_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1133158_1133791_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930190.1|1134118_1135639_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 11
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	1157557	1219846	4122649	tRNA,transposase	Erysipelothrix_phage(33.33%)	49	NA	NA
WP_010930198.1|1157557_1158508_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248935.1|1158606_1159230_-	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930200.1|1159407_1161690_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1161844_1164541_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1164666_1165155_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1167565_1170436_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1170481_1171696_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1171925_1173353_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1173450_1174542_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1174554_1175313_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1175400_1176303_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1176299_1177250_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1177348_1178299_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1178428_1179412_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1179466_1180189_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1181667_1183023_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1183103_1185479_-	RNA-binding transcriptional accessory protein Tex	NA	NA	NA	NA	NA
WP_010930213.1|1185643_1187719_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_003813594.1|1187780_1188581_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1188682_1189645_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1189632_1190388_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1190495_1192133_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1192200_1192938_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1193040_1193616_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1193788_1194325_+	iron transporter	NA	NA	NA	NA	NA
WP_003813580.1|1194327_1194672_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1194687_1195533_+	FTR1 family protein	NA	NA	NA	NA	NA
WP_003821443.1|1195571_1196951_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1197028_1197910_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1198008_1198959_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1199057_1200008_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1200004_1200415_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1200522_1201377_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1201369_1202332_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1202377_1203502_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1203607_1204486_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1204610_1205390_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1205543_1206965_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1207399_1209097_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1209323_1210265_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1210591_1211338_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1211345_1212272_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1212393_1213311_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1213350_1214304_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1214328_1214907_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1216580_1217189_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1217266_1217620_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1217703_1218693_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_023853639.1|1218895_1219846_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	1382410	1448910	4122649	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_010930208.1|1382410_1383361_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1383426_1383606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1383722_1384478_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1384464_1385610_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1386517_1387468_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811370.1|1387655_1388858_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_077069143.1|1388854_1389613_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811375.1|1390006_1390639_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930311.1|1391594_1394195_+	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_010930312.1|1394182_1397602_-	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930313.1|1397609_1398515_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811381.1|1398653_1399232_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930314.1|1399228_1400140_+	CoA ester lyase	NA	NA	NA	NA	NA
WP_010930315.1|1400153_1400834_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930316.1|1401035_1403075_+	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_014486069.1|1403093_1404080_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930317.1|1404105_1404903_+	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_003811389.1|1404899_1406093_+	CoA transferase	NA	NA	NA	NA	NA
WP_003811391.1|1406089_1407052_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811393.1|1407069_1408110_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811396.1|1408097_1408706_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930318.1|1410294_1411290_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811400.1|1411309_1412488_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_003811401.1|1412498_1413416_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_010930208.1|1413471_1414422_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812022.1|1414520_1415291_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_003812020.1|1415287_1415968_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930319.1|1416034_1416823_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931363.1|1417069_1418086_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930321.1|1418391_1419546_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_003817170.1|1424051_1424534_-	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_003817172.1|1424551_1424842_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_010930322.1|1424968_1425679_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_010930323.1|1425862_1426270_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_003817176.1|1426282_1426702_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930324.1|1426749_1427454_+	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817180.1|1427519_1428941_+	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_003817181.1|1428979_1429744_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_010930325.1|1429787_1430573_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_010930326.1|1430572_1431262_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930327.1|1431264_1432398_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930328.1|1432415_1433438_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930329.1|1433507_1435154_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930330.1|1435187_1436720_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930331.1|1436798_1438619_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930332.1|1438739_1440359_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_014486070.1|1440537_1441980_+	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010929632.1|1442196_1443213_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930333.1|1443259_1444048_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_003811859.1|1444070_1444340_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_015041547.1|1444356_1445148_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811855.1|1445159_1445501_-	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930335.1|1445511_1446012_-	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811852.1|1446004_1447015_-	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_003811850.1|1447017_1447590_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_005012067.1|1447959_1448910_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	1477081	1515671	4122649	transposase,protease	Emiliania_huxleyi_virus(14.29%)	35	NA	NA
WP_010930352.1|1477081_1478416_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1478468_1480805_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1480930_1481494_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1481502_1482594_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1482665_1483121_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1483121_1483916_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1483912_1485094_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1485080_1485686_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1485682_1486456_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1486467_1487295_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1487456_1489820_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1489887_1490607_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1490730_1491156_+	NfeD family protein	NA	NA	NA	NA	NA
WP_005012067.1|1491190_1492141_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1492258_1493185_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1493250_1494408_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1494388_1494856_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_005015810.1|1495003_1495954_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1495970_1496405_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1496394_1496745_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1496941_1498096_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811746.1|1498092_1499265_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1499312_1500206_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1500251_1500689_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1500748_1501438_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1501447_1502398_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1502496_1503447_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930364.1|1503545_1504508_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_023852833.1|1504734_1505889_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930366.1|1505899_1509142_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_003809593.1|1510163_1510808_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930367.1|1510818_1511718_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809599.1|1511765_1512851_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930368.1|1512847_1514542_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_005012808.1|1514720_1515671_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2052416	2125614	4122649	transposase	Bacillus_virus(20.0%)	60	NA	NA
WP_010929591.1|2052416_2053367_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2053818_2054820_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2054992_2055850_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2055846_2057109_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2057209_2057584_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|2057656_2058844_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2058928_2059699_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2059812_2060577_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2060527_2061829_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|2061825_2062632_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|2064376_2065348_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2065504_2066017_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2066175_2067150_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2068150_2068945_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2068970_2069777_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2069887_2070478_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2070488_2071667_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2071769_2072144_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019247652.1|2072396_2073713_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2073779_2077010_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2078500_2079247_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2079331_2079793_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2079830_2080889_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2080851_2082681_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2082720_2083293_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2084717_2085539_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2085857_2087180_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2087539_2088175_+	membrane protein	NA	NA	NA	NA	NA
WP_076879629.1|2088134_2089085_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2089955_2090828_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2090905_2092045_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2092403_2093660_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2093665_2094193_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2094197_2095016_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2095015_2095738_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2095759_2096074_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2096091_2097240_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2097270_2098146_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2098142_2099462_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2099534_2100731_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2100741_2102229_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2104823_2105723_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2105860_2106826_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2106924_2107875_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|2108096_2109047_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812024.1|2109043_2109346_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_003812026.1|2109505_2109910_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_010930743.1|2109902_2111129_+	NnrS family protein	NA	NA	NA	NA	NA
WP_003812030.1|2111125_2111572_+	membrane protein	NA	NA	NA	NA	NA
WP_003812032.1|2111641_2112424_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_010930744.1|2112465_2113971_+	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247851.1|2114256_2115090_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930745.1|2116527_2117349_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930746.1|2117367_2118222_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_003812044.1|2118225_2119197_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_076879627.1|2119881_2120058_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|2120543_2121494_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2122631_2122928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2123102_2124455_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2124597_2125614_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2138820	2193507	4122649	transposase,protease	Bacillus_phage(12.5%)	53	NA	NA
WP_010929577.1|2138820_2139771_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2140423_2141374_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2141457_2143275_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2143348_2143996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2144008_2144938_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2145107_2145572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2145819_2146500_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_077069146.1|2146548_2148240_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2148255_2148807_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2148803_2149175_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2149287_2150124_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2150134_2150659_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2150756_2150936_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2151065_2152040_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2152170_2152527_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2152516_2153392_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2153490_2154375_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2154396_2155692_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2156640_2157291_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2157378_2158899_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2159156_2161022_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_154585107.1|2162032_2162194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2162940_2163300_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2163287_2164724_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2164720_2165374_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2165370_2166564_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2166667_2167942_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2167938_2168889_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930774.1|2169055_2170030_+	membrane protein	NA	NA	NA	NA	NA
WP_003810379.1|2170026_2170170_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_003810383.1|2171791_2172454_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003818560.1|2172456_2172633_+	cytochrome oxidase	NA	NA	NA	NA	NA
WP_010930775.1|2172629_2173568_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_010930776.1|2173659_2175150_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930777.1|2175235_2175388_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930778.1|2175401_2175641_+	membrane protein	NA	NA	NA	NA	NA
WP_010930779.1|2175736_2176480_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930780.1|2176512_2177013_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_170954295.1|2177075_2178035_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_003810400.1|2178031_2178793_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930782.1|2178808_2179894_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005013747.1|2180093_2181044_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2181003_2181417_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2181701_2182001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2182410_2184693_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2185158_2185353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2185378_2187409_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2187428_2187641_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2187918_2188458_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2188571_2189867_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2189943_2191101_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2191284_2192184_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2192202_2193507_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
>prophage 16
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2246469	2312018	4122649	tRNA,transposase,protease	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010930363.1|2246469_2247420_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2247620_2248430_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2248554_2249505_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2249501_2250395_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2250519_2250714_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2250713_2251055_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2251064_2252927_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2253056_2253569_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2253571_2253895_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2253896_2254307_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2254344_2255556_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2255573_2256086_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2256301_2256793_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2257045_2259082_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2259159_2260362_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2260490_2261141_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2262698_2263649_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2264219_2264432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2264449_2265181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2265215_2265857_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2265849_2266518_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2268730_2269507_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2269528_2270686_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2270682_2271114_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2271110_2271914_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2271927_2272329_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2272395_2273367_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2273432_2274656_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2274883_2275834_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2275957_2278411_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2278599_2279904_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2280008_2280662_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2280664_2281975_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2282171_2282732_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2282843_2283044_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2283389_2283956_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2284039_2284243_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2284549_2284870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2284911_2285193_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2285267_2286524_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2286906_2287236_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2288806_2289628_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2289627_2290767_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2290773_2291670_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2291666_2293592_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2293951_2296564_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2296616_2298917_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2298913_2300122_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2300383_2300758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930179.1|2300754_2301705_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2301803_2303798_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2303857_2304823_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2304812_2307674_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2307676_2308183_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2308287_2309496_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2309497_2310436_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2310597_2311071_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2311067_2312018_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2325519	2380784	4122649	tRNA,transposase	uncultured_Mediterranean_phage(14.29%)	50	NA	NA
WP_005012067.1|2325519_2326470_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2327244_2327913_+	arylesterase	NA	NA	NA	NA	NA
WP_077069147.1|2327894_2329910_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_004568486.1|2330092_2330842_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2330854_2331718_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2331721_2333137_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2333270_2333999_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2334137_2334338_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2334513_2334912_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2334935_2336336_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2336454_2337207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930528.1|2337495_2338095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004568488.1|2338199_2338979_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2338975_2339860_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2339877_2340657_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2340641_2341400_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_003811015.1|2341525_2342173_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2342440_2343457_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2343554_2344595_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2344729_2346022_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2347381_2347765_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2347782_2348370_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_005012067.1|2348407_2349358_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2350342_2351116_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2351112_2352111_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2352195_2352972_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2353127_2354732_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2355112_2356237_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2356363_2356987_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2356983_2358885_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2358933_2359728_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2359740_2360742_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_004568494.1|2360738_2361245_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2361237_2362086_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2362183_2362726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2362769_2363720_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2363875_2364202_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2364198_2364483_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2364479_2364959_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2364955_2366584_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2366580_2366925_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2366924_2369858_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2371016_2371967_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2372065_2372362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2372468_2373386_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2373390_2374104_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2374117_2375089_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249653.1|2376808_2377189_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_170954298.1|2378802_2379540_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2379833_2380784_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2401575	2472729	4122649	transposase	Tetraselmis_virus(10.0%)	55	NA	NA
WP_005012067.1|2401575_2402526_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2403078_2404704_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2404753_2405788_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2405790_2407137_-	BatD family protein	NA	NA	NA	NA	NA
WP_010930477.1|2407133_2408648_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2408638_2409649_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2410122_2411064_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2411072_2412041_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2413580_2414549_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2414726_2415716_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2415762_2416521_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2416710_2417448_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_005012808.1|2417546_2418497_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2418681_2419464_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2419457_2420159_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2420398_2421001_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2422327_2423278_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2423274_2424831_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2424823_2425597_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2425655_2426606_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2426687_2427863_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2427876_2429934_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2429930_2430956_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2430967_2432257_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2432279_2433377_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2433373_2434264_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2434260_2436345_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2436376_2437546_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2437587_2438328_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2438327_2439098_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247171.1|2439422_2439590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930465.1|2439953_2440739_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2440765_2442850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2443017_2444973_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2445296_2445797_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2445895_2447422_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2447559_2448447_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2448461_2449415_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2449466_2451557_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2451572_2451959_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2454652_2455456_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2456749_2457652_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2457716_2458493_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2458814_2459864_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2459987_2461658_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2461662_2462457_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2462555_2463506_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2463525_2464431_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2464508_2465207_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2465366_2466311_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2466320_2467808_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2467807_2468875_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2468938_2470351_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2470536_2471757_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2471778_2472729_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2556928	2619229	4122649	tRNA,transposase	Salmonella_phage(18.18%)	55	NA	NA
WP_005012067.1|2556928_2557879_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2557977_2558748_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2558744_2559416_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2559412_2560054_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2560066_2560987_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2561147_2562308_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2562349_2563300_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_169507376.1|2563964_2564165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2564287_2565982_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2566103_2566373_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2566488_2566887_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2566897_2567854_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2567990_2568536_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2568556_2570506_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2570893_2571670_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2571675_2572068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2572489_2573440_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2573436_2574534_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2574565_2575516_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2577297_2578539_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2578550_2579324_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2579350_2580301_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2580399_2581182_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2581270_2582497_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814013.1|2583222_2584608_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2584626_2585232_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2585228_2587085_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2587081_2587882_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2587896_2589090_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2589157_2590132_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2590254_2591478_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2591588_2593793_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2594087_2594747_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2594754_2594961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2595299_2596055_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814022.1|2596070_2596232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814023.1|2596325_2596841_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2597113_2597431_+	virulence factor	NA	NA	NA	NA	NA
WP_170954289.1|2597375_2598020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2598145_2599501_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2599547_2600888_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2600989_2601622_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814032.1|2601621_2603982_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2604023_2604983_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2604969_2605656_+	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_005015014.1|2605652_2605985_+	multidrug transporter	NA	NA	NA	NA	NA
WP_010929577.1|2606100_2607051_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814040.1|2607047_2609114_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_003814042.1|2609113_2609386_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_017685545.1|2610080_2610170_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_010930949.1|2610169_2611954_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_010930950.1|2611977_2614143_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_003814050.1|2614153_2614753_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_003814052.1|2617574_2618270_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_005013747.1|2618278_2619229_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2705346	2772062	4122649	tRNA,transposase	Salmonella_phage(22.22%)	59	NA	NA
WP_010929591.1|2705346_2706297_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2706407_2706590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2706689_2707286_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2707469_2708561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2709060_2709471_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2709529_2709871_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2709876_2712294_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2712306_2713329_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2713403_2713763_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2713778_2713976_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_003816756.1|2715455_2715905_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_010929584.1|2715901_2716852_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2716962_2718411_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2718525_2718807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2718910_2719861_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2720105_2720819_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2720941_2721169_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2721463_2722102_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2722210_2723245_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2723241_2724192_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2724607_2725132_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2725135_2725405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2725603_2726665_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2726748_2728383_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2728384_2729188_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2729216_2730176_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2730179_2731694_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2731730_2732735_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_033456131.1|2732742_2732976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931018.1|2733165_2733636_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2733671_2734283_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2734313_2734937_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2735017_2736550_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2736584_2737826_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2737869_2738901_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2738897_2740067_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931025.1|2740060_2740741_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|2740902_2741745_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2741907_2742879_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2743050_2743929_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2743951_2745022_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2745062_2746013_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931030.1|2746305_2747664_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931031.1|2747775_2749503_+	sulfate permease	NA	NA	NA	NA	NA
WP_010931032.1|2750775_2751210_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003816890.1|2751202_2752438_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931033.1|2752445_2753240_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931034.1|2753236_2754040_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931035.1|2754066_2755044_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931036.1|2755072_2756644_-	amidohydrolase	NA	NA	NA	NA	NA
WP_014905903.1|2756654_2757476_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|2759200_2760631_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931038.1|2760643_2761333_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|2761428_2762769_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_019247974.1|2762770_2763028_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931040.1|2763381_2764974_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_003812368.1|2765070_2766531_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931041.1|2766753_2767365_+	DUF2239 family protein	NA	NA	NA	NA	NA
WP_005013747.1|2771111_2772062_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2800429	2873299	4122649	tRNA,transposase	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2800429_2800846_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2800956_2801589_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2801617_2802061_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2802082_2803174_-	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931063.1|2803228_2804029_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2804164_2804785_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931065.1|2804924_2805398_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2806537_2807488_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2807484_2815146_-	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2815386_2819433_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2819745_2820327_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2820323_2821622_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2821701_2822730_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_005013747.1|2822990_2823941_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2823937_2824888_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2825204_2825810_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2825863_2827177_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2827251_2827722_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2827721_2828510_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2828520_2830173_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2830260_2831211_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2832372_2832879_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2832875_2833640_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2833655_2833940_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2834004_2834994_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2835165_2836095_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2836066_2836753_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2836786_2837332_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2837376_2838642_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2838638_2839541_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2840722_2841667_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2841761_2843279_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2843320_2844949_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2845056_2845938_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2849050_2849425_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2849449_2849788_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2849831_2851466_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2851504_2852851_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2852958_2854380_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2854449_2855034_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2855136_2856087_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2856221_2857328_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2857338_2858436_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2858580_2859786_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2859792_2860314_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2860310_2860802_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2860798_2861050_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2861030_2861516_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2861651_2865113_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2865130_2866015_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2866024_2866456_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2866702_2867206_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2867283_2868684_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2868758_2869634_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2869630_2870638_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2871105_2871411_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2871501_2872092_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2872282_2873299_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2876442	2943253	4122649	transposase,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
WP_010929956.1|2876442_2877393_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2877491_2878442_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2878438_2879233_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2879264_2879969_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2880043_2880844_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2880840_2881248_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2881244_2881886_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2881878_2883879_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2885139_2886471_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2886467_2887418_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2889124_2889391_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2890098_2890437_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2894990_2895593_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2895689_2896979_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2897036_2897768_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2897764_2898568_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2898564_2899653_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2899649_2900579_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2900727_2901873_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2901894_2902845_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2903175_2906997_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2907153_2907822_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2907826_2909500_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2909518_2910838_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2910842_2913158_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2913213_2915382_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2915378_2920568_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2920657_2920972_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2921199_2921445_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2921539_2922058_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2922157_2923363_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2923478_2924876_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2924992_2925571_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2925643_2927035_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2927202_2928153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2928433_2929054_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2929050_2929464_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2929460_2930504_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2930559_2930748_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2930757_2931522_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2931612_2932269_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2932360_2933119_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2933144_2934746_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2934946_2935951_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2936051_2936315_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2936432_2937209_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2937799_2938750_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2941133_2942246_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|2942302_2943253_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	2965545	3017330	4122649	transposase	Staphylococcus_phage(25.0%)	46	NA	NA
WP_005012067.1|2965545_2966496_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814555.1|2966691_2968164_-	magnesium transporter	NA	NA	NA	NA	NA
WP_003814554.1|2968174_2968585_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_010929220.1|2968648_2969695_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
WP_003814552.1|2969801_2970680_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931140.1|2970693_2971890_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852727.1|2971966_2973643_+	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	28.1	9.3e-33
WP_010929591.1|2973639_2974590_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2974710_2975607_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2977884_2980110_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2980274_2981363_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2981319_2981973_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2982020_2982818_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2983349_2984300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|2984374_2985529_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2985585_2986536_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2986634_2986940_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2986968_2987403_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2987404_2988649_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2988645_2989356_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2989370_2990282_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2990644_2991049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2991045_2991504_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|2991510_2992419_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|2992415_2993282_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2993268_2994096_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2994106_2995234_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2996311_2997550_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2997591_2998854_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2998860_2999613_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2999664_2999850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|3000125_3000590_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|3000621_3001281_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|3001425_3003534_+	AsmA family protein	NA	NA	NA	NA	NA
WP_076879634.1|3003530_3004481_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|3004584_3005205_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|3005296_3006049_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|3007183_3008308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|3008353_3008722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3008963_3009914_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|3010949_3011492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930176.1|3011877_3012828_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|3012824_3013790_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|3013859_3014696_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|3015208_3016318_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|3016379_3017330_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	3139944	3203778	4122649	tRNA,transposase,protease	Pseudomonas_phage(30.0%)	56	NA	NA
WP_005015810.1|3139944_3140895_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122802.1|3141040_3142165_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	3.8e-38
WP_023853315.1|3142370_3142934_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_003814871.1|3143928_3144411_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_003814873.1|3144568_3145816_-	serine hydroxymethyltransferase	NA	A0A219YCZ0	Aeromonas_phage	52.7	1.1e-99
WP_003820605.1|3146035_3146692_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_003814877.1|3146727_3147957_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_005012067.1|3148224_3149175_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931221.1|3149266_3150682_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A8ATH6	Listeria_phage	46.9	1.9e-18
WP_010931222.1|3150687_3151824_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_003814883.1|3151893_3152265_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	56.9	4.7e-30
WP_010931223.1|3152352_3153099_-	membrane protein	NA	NA	NA	NA	NA
WP_003820599.1|3153135_3154200_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_010931224.1|3154388_3154781_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_010927106.1|3154790_3155219_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_004567739.1|3155514_3156612_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004567741.1|3156953_3158318_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_023853313.1|3158376_3158928_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_010931226.1|3158941_3159616_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931227.1|3160872_3161682_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.9	2.6e-33
WP_010931228.1|3161684_3162521_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003820594.1|3162535_3163228_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_003820593.1|3163239_3163629_-	VOC family protein	NA	NA	NA	NA	NA
WP_003820592.1|3163734_3165123_-	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	33.5	4.6e-54
WP_010931229.1|3165239_3166736_-	membrane protein	NA	NA	NA	NA	NA
WP_010931230.1|3167032_3167707_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3167805_3168756_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931231.1|3168752_3171212_-	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003814917.1|3171308_3172754_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010931233.1|3172757_3173945_-	MFS transporter	NA	NA	NA	NA	NA
WP_023998238.1|3174013_3174523_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814925.1|3174724_3175177_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_192855352.1|3175149_3175716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247415.1|3175738_3178801_+	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA	NA
WP_010931235.1|3179106_3182034_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	43.9	3.4e-171
WP_003814929.1|3182055_3183252_+	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2H4P762	Pseudomonas_phage	28.9	1.0e-33
WP_010931236.1|3183569_3184097_+	histone H1-like DNA-binding protein	NA	NA	NA	NA	NA
WP_010931237.1|3184235_3184811_+	YggT family protein	NA	NA	NA	NA	NA
WP_010931238.1|3184818_3186282_-	D-alanine--poly(phosphoribitol) ligase	NA	A0A2K9L3I8	Tupanvirus	25.1	7.3e-26
WP_010931239.1|3186292_3187420_-	membrane-bound O-acyltransferase	NA	A0A125RNP0	Pseudomonas_phage	30.8	3.7e-25
WP_003814941.1|3187549_3188677_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_003814943.1|3188702_3188942_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_010931240.1|3189222_3189726_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010931241.1|3189898_3190840_-	carbohydrate kinase family protein	NA	NA	NA	NA	NA
WP_010931242.1|3190851_3191949_-	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_003814951.1|3192914_3194261_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_003814952.1|3194270_3194720_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003814953.1|3194809_3195244_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_023853327.1|3195322_3195871_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_003814955.1|3195953_3197324_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_010931244.1|3197334_3197928_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_014486102.1|3197999_3199883_+	RNB domain-containing ribonuclease	NA	NA	NA	NA	NA
WP_010931246.1|3199920_3200820_+	TonB family protein	NA	NA	NA	NA	NA
WP_010931247.1|3200816_3201680_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|3201778_3202729_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3202827_3203778_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	3397303	3451044	4122649	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3397303_3398254_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3398658_3399303_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3399327_3399912_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3400012_3400630_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3400632_3402348_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3402344_3402653_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3402669_3403287_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3403331_3403634_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3403734_3404589_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3404776_3405001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3405170_3405443_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3405860_3406268_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3406637_3407432_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3407532_3408768_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3408836_3409853_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3409864_3411241_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3411237_3412434_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3412430_3413969_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3413965_3415225_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3417165_3418116_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3418882_3419977_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3419969_3421304_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3421257_3421941_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3421966_3423130_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3423126_3424128_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3424127_3425000_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3424996_3425746_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3425742_3426534_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3426530_3427670_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3427945_3428731_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3428764_3429547_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3429550_3429940_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3431079_3431943_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3431978_3433067_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_005013747.1|3433063_3434014_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3434367_3437346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3438272_3439151_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3441099_3442050_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3442046_3442514_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3442556_3443327_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010927090.1|3443347_3444148_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3444158_3445568_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3445662_3446448_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_023994644.1|3446687_3447704_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3447811_3448204_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3448341_3449022_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3449026_3449998_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3450093_3451044_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	3457198	3516498	4122649	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3457198_3458962_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3459073_3459952_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3460064_3460880_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3460883_3461135_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010930525.1|3461219_3462236_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3462566_3462788_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3465148_3466066_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3466563_3467772_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3467851_3469423_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3469540_3470476_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3470664_3471609_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3472176_3477894_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3477899_3479027_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3479082_3479709_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3479980_3480997_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3481092_3481803_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3481799_3482789_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3482884_3484516_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3484518_3485256_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3485411_3486284_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3486552_3487773_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3487769_3488429_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3488500_3489133_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3489162_3489681_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3489691_3490801_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3490847_3491702_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3491703_3492606_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3493828_3494779_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905441.1|3496535_3497525_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3497521_3497680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3497700_3498489_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3498485_3499517_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3499535_3500099_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3500154_3501675_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3501938_3502643_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3502650_3503388_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3503493_3503868_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3503910_3505200_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3505196_3506366_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3506362_3507202_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3507261_3508197_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3508209_3509160_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3509258_3510221_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3510252_3510612_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3510736_3511639_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3511640_3513413_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3513447_3514224_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3515547_3516498_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	3531436	3602257	4122649	tRNA,transposase	Planktothrix_phage(10.0%)	56	NA	NA
WP_005012808.1|3531436_3532387_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3532515_3533649_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3533692_3534598_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3534600_3536301_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3536297_3537218_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3537225_3538203_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3538261_3539296_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3541270_3541507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3541633_3542497_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3542585_3543407_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3543486_3544224_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3544220_3545213_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3545326_3545989_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3546033_3547182_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3549505_3550456_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3551841_3552792_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3553088_3553586_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931404.1|3555416_3556283_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3556289_3557024_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3558193_3558988_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3559277_3559868_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3559901_3561230_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3561304_3562450_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3562561_3563560_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3563522_3563957_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3565473_3566358_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3566354_3567560_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3567556_3568417_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3568529_3570320_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3570360_3571026_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3571026_3571335_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3571500_3572787_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929969.1|3574220_3575171_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3577122_3578337_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3578442_3579432_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3579428_3580037_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3580049_3580679_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3580675_3581296_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3581327_3582119_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3582970_3583426_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3583444_3584371_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3584424_3585711_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3586641_3587514_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3587510_3588461_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_020699695.1|3589613_3589844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247263.1|3589970_3590360_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010929962.1|3590376_3592758_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_023853194.1|3592750_3594127_-	FAD binding domain-containing protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929960.1|3594142_3595138_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003819054.1|3595156_3596149_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807624.1|3596389_3596950_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|3596954_3597281_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_010929958.1|3597317_3598130_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003807618.1|3598140_3599223_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929957.1|3599309_3600584_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3601306_3602257_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	3720582	3750568	4122649	tRNA,transposase	Streptococcus_phage(12.5%)	31	NA	NA
WP_010929577.1|3720582_3721533_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3721632_3722583_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929878.1|3722579_3723215_-	LysE family transporter	NA	NA	NA	NA	NA
WP_003818466.1|3723344_3724244_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003807278.1|3724339_3724831_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_010929877.1|3724877_3725843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929876.1|3726976_3728218_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_003807287.1|3728331_3729348_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929875.1|3729382_3729859_-	membrane protein	NA	NA	NA	NA	NA
WP_003807291.1|3730001_3730910_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929874.1|3731023_3732136_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_023853429.1|3732236_3732722_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818477.1|3732858_3734109_+	kynureninase	NA	NA	NA	NA	NA
WP_003807300.1|3734210_3734723_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_005013747.1|3734821_3735772_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929873.1|3735837_3736776_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_010929872.1|3736798_3737425_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_003818481.1|3737421_3738078_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929871.1|3738074_3738677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929870.1|3738683_3739271_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.1e-07
WP_010929869.1|3739451_3740021_+	bacterioferritin	NA	NA	NA	NA	NA
WP_003807313.1|3740091_3741411_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_003807315.1|3741517_3741709_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010929868.1|3741960_3743250_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929867.1|3743404_3744400_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807322.1|3744484_3745159_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3745155_3746106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3746204_3747155_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816336.1|3747316_3748558_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_010929866.1|3748554_3749499_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_005012067.1|3749617_3750568_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP013075	Bordetella pertussis strain B201 chromosome, complete genome	4122649	3770737	3806461	4122649	transposase,integrase	Burkholderia_phage(11.11%)	33	3767324:3767341	3811965:3811982
3767324:3767341	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_005012067.1|3770737_3771688_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929852.1|3771698_3772340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926414.1|3772506_3772749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929851.1|3772847_3773798_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929850.1|3773833_3774301_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010926411.1|3774534_3774912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926410.1|3774908_3775091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929849.1|3775094_3776081_+	recombinase RecT	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010929848.1|3776077_3776725_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_019247983.1|3777347_3778532_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929845.1|3778542_3778884_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_010926403.1|3778996_3779197_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|3779193_3780183_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010929841.1|3781669_3783640_-	type III secretion system effector BopC	NA	NA	NA	NA	NA
WP_003814626.1|3783881_3784280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929840.1|3784288_3785212_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3785669_3786620_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927254.1|3786850_3788542_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_003816027.1|3788590_3788863_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_003816026.1|3788859_3789231_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|3789326_3789461_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_010929554.1|3789866_3791276_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_010929839.1|3791278_3792388_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929838.1|3792482_3794936_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_023853625.1|3795054_3795846_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929836.1|3795965_3797393_+	amidase	NA	NA	NA	NA	NA
WP_010929835.1|3797431_3798403_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929834.1|3798821_3799985_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929833.1|3800072_3800918_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3802474_3803425_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|3803979_3804354_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|3804428_3805487_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|3805510_3806461_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
3811965:3811982	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
