The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	27282	70036	4110608	tRNA,transposase	Synechococcus_phage(50.0%)	41	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	77634	136108	4110608	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	164892	225403	4110608	tRNA,transposase,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184325_188000_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189529_190003_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193073_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|194404_195355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195457_196093_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197377_198478_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198559_198934_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198993_201858_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202812_204024_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205634_206585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206741_207065_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207169_208210_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208215_208995_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209040_209337_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209362_209638_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210338_211025_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211154_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212056_212782_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214274_215207_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|215664_218460_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219053_221996_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222825_223374_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224452_225403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	233335	286923	4110608	tRNA,transposase,protease	Bacillus_phage(25.0%)	48	NA	NA
WP_010929969.1|233335_234286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234372_235323_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235319_236270_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236368_237166_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238115_238526_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239547_240291_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240334_241378_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241548_243651_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245061_246018_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246036_246528_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246524_247880_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247880_248579_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248575_249277_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249529_250579_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250684_251626_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251622_253512_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253598_254237_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254379_255765_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255695_256232_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256383_257775_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257791_258772_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258907_259891_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259955_260855_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260961_262716_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262723_263848_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263861_264842_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265572_266523_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267082_267628_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267711_269331_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269346_270501_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270514_270640_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270636_272388_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272384_274064_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274126_274675_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275817_276096_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277139_278090_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278107_278254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278367_278529_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278536_278677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279195_279645_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279654_280266_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280424_281279_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281298_282681_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282745_283387_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283526_283985_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284009_284786_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284839_285976_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285972_286923_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	556357	615657	4110608	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|556357_557308_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|558631_559408_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|559442_561215_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|561216_562119_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|562243_562603_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|562634_563597_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|563695_564646_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|564658_565594_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|565653_566493_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|566489_567659_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|567655_568945_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|568987_569362_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|569467_570205_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|570212_570917_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|571180_572701_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|572756_573320_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|573338_574370_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|574366_575155_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|575175_575334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905441.1|575330_576320_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|578076_579027_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|580249_581152_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|581153_582008_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|582054_583164_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|583174_583693_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|583722_584355_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|584426_585086_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|585082_586303_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|586571_587444_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|587599_588337_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931369.1|588339_589971_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|590066_591056_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|591052_591763_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|591858_592875_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|593146_593773_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|593828_594956_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|594961_600679_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|601246_602191_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|602379_603315_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|603432_605004_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|605083_606292_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|606789_607707_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|610067_610289_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|610619_611636_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|611720_611972_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|611975_612791_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|612903_613782_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|613893_615657_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 7
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	621812	675553	4110608	transposase	Salmonella_phage(33.33%)	48	NA	NA
WP_010930179.1|621812_622763_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|622858_623830_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|623834_624515_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|624652_625045_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|625152_626169_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|626408_627194_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|627288_628698_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|628708_629509_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|629529_630300_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|630342_630810_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|630806_631757_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077069182.1|633705_634584_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|635510_638489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|638842_639793_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|639789_640878_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|640913_641777_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|642916_643306_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|643309_644092_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|644125_644911_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|645186_646326_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|646322_647114_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|647110_647860_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|647856_648729_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|648728_649730_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|649726_650890_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|650915_651599_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|651552_652887_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|652879_653974_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|654740_655691_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|657631_658891_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|658887_660426_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|660422_661619_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931342.1|661615_662992_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|663003_664020_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|664088_665324_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|665424_666219_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|666588_666996_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|667413_667686_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|667855_668080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|668267_669122_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|669222_669525_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814828.1|669569_670187_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|670203_670512_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|670508_672224_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|672226_672844_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|672944_673529_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|673553_674198_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|674602_675553_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	724491	764441	4110608	transposase,integrase,tRNA,protease	Pseudomonas_phage(33.33%)	30	721739:721757	741627:741645
721739:721757	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931308.1|724491_725088_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|725084_725867_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|725939_727031_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|727310_728438_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|728779_729826_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|729973_733093_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|733094_736046_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|736061_737273_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|737456_738407_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|738423_738918_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|738921_739179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|739722_740634_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|740715_741000_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|741783_742734_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
741627:741645	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|743152_745717_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|745761_747615_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|747947_749519_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162291319.1|750787_750943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|750960_751911_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|751996_752737_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|752963_753911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|755298_756249_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994811.1|756266_756479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814139.1|756442_757258_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931299.1|757390_758830_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814142.1|758843_759185_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931298.1|759239_760895_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814146.1|761046_762057_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814148.1|762189_762963_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|763490_764441_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	774368	821986	4110608	tRNA,holin,transposase,protease	Bovine_alphaherpesvirus(10.0%)	47	NA	NA
WP_005012808.1|774368_775319_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818450.1|775457_776210_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_010931273.1|776448_778173_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
WP_004566001.1|778192_779452_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931274.1|779466_780561_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_023995440.1|780557_782684_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
WP_010931276.1|782696_783377_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_003807204.1|783654_785028_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_003818444.1|785029_786049_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003818443.1|786112_787084_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|787148_788099_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807199.1|788197_789040_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_010931277.1|789039_789375_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010931278.1|789445_790864_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
WP_003807194.1|791143_792184_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_003818441.1|792263_792515_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_010925730.1|792625_793789_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.8	5.0e-126
WP_010931279.1|794072_794927_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010931280.1|794923_795814_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_003807183.1|795856_796768_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_010931281.1|796794_797487_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_010931282.1|797501_798482_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
WP_010931283.1|798494_800636_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003818434.1|800684_801653_-	putative membrane protein	NA	NA	NA	NA	NA
WP_019247300.1|801643_802312_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_010931286.1|802272_803208_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931287.1|803204_804101_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_010931288.1|804097_804820_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
WP_019248127.1|804810_804975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807166.1|805148_805652_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_010931290.1|805928_807044_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_003807164.1|807186_807651_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_010931291.1|807798_808338_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003807162.1|808359_809694_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_003807161.1|809707_810013_-	copper-binding protein	NA	NA	NA	NA	NA
WP_023853416.1|810437_811019_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|811100_812051_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|812149_813100_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814620.1|813540_814446_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023853019.1|814501_816106_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_010931270.1|816362_817868_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_003820744.1|817882_818347_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_005012067.1|818636_819587_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268687.1|819604_819793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820745.1|819749_820280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|820279_820591_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_005012808.1|821035_821986_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1006202	1100239	4110608	transposase	Bacillus_virus(30.0%)	88	NA	NA
WP_005012067.1|1006202_1007153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1007255_1007918_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1008012_1008183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1008535_1009537_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1009539_1010736_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1010756_1011560_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1011640_1011937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1011967_1012531_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1012571_1013429_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1013436_1014186_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1014207_1015080_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1015108_1015888_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1015921_1016719_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1019373_1019766_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1019759_1020620_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1020623_1021586_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1022362_1023052_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1023912_1024863_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1025212_1026082_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1026152_1026848_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1026837_1027347_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1027343_1028564_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1028511_1029414_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1030300_1031587_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1031625_1032999_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1033037_1033739_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1034037_1035027_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1035127_1035589_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1035604_1036153_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1036294_1037770_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1037875_1038967_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1038970_1039753_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1039762_1040551_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1041676_1042111_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1042107_1043118_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1043161_1044088_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1044374_1044743_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_154698394.1|1044795_1044942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853143.1|1044959_1045910_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1045954_1048381_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1048429_1049122_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1049194_1050394_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1050411_1051317_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1051432_1052362_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1052387_1053734_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1053761_1054511_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1054524_1055307_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1055499_1056450_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1056511_1057621_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1058133_1058970_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1059039_1060005_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1060001_1060952_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1060969_1061140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1061337_1061880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1062915_1063866_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1064107_1064476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1064521_1065646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1066780_1067533_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1067624_1068245_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1068348_1069299_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1069295_1071404_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1071548_1072208_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1072239_1072704_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1072979_1073165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1073216_1073969_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1073975_1075238_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1075279_1076518_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1077595_1078723_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1078733_1079561_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1079547_1080414_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1081780_1082185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1082276_1083227_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120814.1|1083244_1083409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1083596_1084508_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1084522_1085233_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1085229_1086474_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1086475_1086910_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1086938_1087244_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1087342_1088293_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1088349_1089504_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1089578_1090529_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1091060_1091858_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1091905_1092559_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1092515_1093604_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1093768_1095994_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1098271_1099168_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_162268686.1|1099121_1099271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1099288_1100239_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1130625	1201590	4110608	transposase,protease	uncultured_Mediterranean_phage(25.0%)	53	NA	NA
WP_005012808.1|1130625_1131576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1131632_1132745_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1135128_1136079_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1136669_1137446_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1137563_1137827_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1137927_1138932_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1139132_1140734_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1140759_1141518_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1141609_1142266_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1142356_1143121_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1143130_1143319_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1143374_1144418_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1144414_1144828_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1144824_1145445_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1145725_1146676_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1146843_1148235_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1148307_1148886_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1149002_1150400_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1150515_1151721_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1151820_1152339_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1152433_1152679_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1152906_1153221_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1153310_1158500_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1158496_1160665_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1160720_1163036_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1163040_1164360_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1164378_1166052_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1166056_1166725_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1166881_1170703_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_154698391.1|1170857_1171016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|1171033_1171984_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1172005_1173151_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1173299_1174229_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1174225_1175314_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1175310_1176114_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1176110_1176842_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1176899_1178189_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1178285_1178888_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1183435_1183774_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1184481_1184748_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1186454_1187405_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1187401_1188733_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1189993_1191994_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1191986_1192628_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1192624_1193032_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1193028_1193829_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1193903_1194608_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1194639_1195434_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1195430_1196381_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1196479_1197430_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1197528_1197963_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1198045_1200382_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1200573_1201590_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1242661	1324796	4110608	tRNA,transposase	Bacillus_virus(25.0%)	60	NA	NA
WP_010929591.1|1242661_1243612_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931074.1|1243699_1245352_+	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010931073.1|1245362_1246151_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_003813284.1|1246150_1246621_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931072.1|1246695_1248009_+	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_010931071.1|1248062_1248668_-	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010927663.1|1248984_1249935_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1249931_1250882_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1251142_1252171_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1252250_1253549_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1253545_1254127_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1254439_1258486_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1258726_1266388_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1266384_1267335_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1268474_1268948_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1269087_1269708_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1269843_1270644_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1270698_1271790_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1271811_1272255_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1272283_1272916_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1273026_1273443_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1273435_1274128_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1274234_1274609_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1274685_1275495_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1275590_1276535_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1276573_1277545_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1277635_1278073_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1278131_1279013_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1280016_1280877_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1280909_1282292_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1282288_1283308_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1283680_1284175_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1284182_1284923_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1285003_1286608_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1286647_1287436_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1288638_1289727_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1290607_1291420_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1291432_1291741_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1291858_1293589_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1293590_1294736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810957.1|1295654_1296122_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1296257_1297640_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1297636_1298761_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1298757_1301394_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1301809_1302760_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1306506_1307118_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1307340_1308801_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1308897_1310490_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1310843_1311101_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1311102_1312443_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1312538_1313228_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1313240_1314671_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1316395_1317217_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1317227_1318799_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1318827_1319805_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1319831_1320635_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1320631_1321426_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1321433_1322669_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1322661_1323096_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1323845_1324796_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1328907	1370625	4110608	tRNA,transposase	Salmonella_phage(33.33%)	43	NA	NA
WP_005013747.1|1328907_1329858_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1329956_1330907_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1330947_1332018_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1332040_1332919_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1333090_1334062_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1334224_1335067_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1335228_1335909_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1335902_1337072_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1337068_1338100_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1338143_1339385_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1339419_1340952_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1341032_1341656_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1341686_1342298_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1342333_1342804_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1343235_1344240_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1344276_1345791_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1345794_1346754_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1346782_1347586_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1347587_1349222_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1349305_1350367_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1350565_1350835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1350838_1351363_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1351778_1352729_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1352725_1353760_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1353868_1354507_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1354801_1355029_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1355151_1355865_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1356109_1357060_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1357163_1357445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1357559_1359008_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1359118_1360069_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|1360065_1360515_-	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_010929584.1|1360709_1361660_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812834.1|1361995_1362193_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_003812832.1|1362208_1362568_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_010926359.1|1362642_1363665_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_010931007.1|1363677_1366095_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010931006.1|1366100_1366442_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_003812822.1|1366500_1366911_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931005.1|1367410_1368502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|1368685_1369282_+	lipoprotein	NA	NA	NA	NA	NA
WP_004567479.1|1369381_1369564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1369674_1370625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1450302	1502455	4110608	tRNA,transposase	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1450302_1451253_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1451270_1451423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1451419_1451773_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1451785_1452148_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1452189_1452615_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1452817_1454074_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1454272_1455253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1455402_1456644_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1456742_1457693_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1457701_1458397_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1461218_1461818_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1461828_1463994_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1464017_1465802_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1465801_1465891_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1466585_1466858_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1466857_1468924_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1468920_1469871_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1469969_1470920_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1471035_1471368_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1471364_1472051_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1472037_1472997_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1473038_1475399_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1475398_1476031_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1476132_1477473_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1477519_1478875_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1479000_1479645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1479589_1479907_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1480179_1480695_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1480788_1480950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1480965_1481721_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1482059_1482266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1482273_1482933_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1483227_1485432_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1485542_1486766_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1486888_1487863_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1487930_1489124_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1489138_1489939_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1489935_1491792_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1491788_1492394_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1492412_1493798_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1494523_1495750_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1495838_1496621_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1496719_1497670_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1497696_1498470_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1498481_1499723_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1501504_1502455_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1546380	1614466	4110608	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1546380_1546869_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1546986_1547565_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1547670_1548039_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1548137_1549088_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1549094_1550207_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1550893_1552096_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1552131_1552278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1552299_1554960_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1554972_1558377_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1559044_1561270_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1561316_1561643_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1561693_1562302_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1562400_1563351_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1563420_1564185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1564181_1564781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1564884_1565736_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1565795_1566422_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1566418_1567369_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1567467_1568580_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1568569_1569571_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1569676_1571188_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1571184_1572489_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1572600_1573161_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1573428_1573983_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1574438_1574654_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1574908_1577506_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1577502_1578690_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_019248658.1|1579348_1579963_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1580051_1581179_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1581190_1582096_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1582988_1583939_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1584120_1584873_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1584941_1585601_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1585597_1586326_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1586338_1588618_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1588642_1588846_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1588887_1589520_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1589655_1590573_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1590569_1591283_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1591520_1592291_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1592295_1592895_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1593139_1594630_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1594688_1594973_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1595110_1595266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1595538_1596465_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1596601_1597342_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1597508_1598885_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1599066_1599972_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1601623_1603426_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1603552_1604194_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1604292_1605243_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1605264_1606485_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1606670_1608083_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1608146_1609214_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1609213_1610701_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1610710_1611655_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1611814_1612513_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1612590_1613496_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1613515_1614466_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1650433	1706024	4110608	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1650433_1651384_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1651442_1652216_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1652208_1653765_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1653761_1654712_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1656038_1656641_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1656880_1657582_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1657575_1658358_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1658542_1659493_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1659591_1660329_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1660518_1661277_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1661323_1662313_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1662490_1663459_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1664998_1665967_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1665975_1666917_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1667390_1668401_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1668391_1669906_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1669902_1671249_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1671251_1672286_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1672335_1673961_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1674513_1675464_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1675568_1676516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1676569_1678384_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1678376_1679051_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1679180_1682255_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1682268_1682568_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1682882_1683506_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1683749_1684619_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1684596_1685541_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1685626_1686553_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1686665_1687445_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1687435_1688632_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1688662_1689613_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1689834_1690524_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1690588_1691344_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1691395_1692388_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1692397_1693351_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1693466_1694429_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1695830_1696259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1696255_1697206_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1697499_1698237_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1698660_1699848_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1699851_1700232_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1701951_1702923_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1702936_1703650_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1703654_1704572_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1704678_1704975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1705073_1706024_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	1909407	1980924	4110608	transposase,protease	Faecalibacterium_phage(12.5%)	58	NA	NA
WP_005012067.1|1909407_1910358_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1910456_1911407_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930697.1|1911488_1912037_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930698.1|1912039_1912378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930699.1|1912772_1915364_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
WP_029443737.1|1915430_1916174_+	3'-5' exonuclease	NA	A0A2K9V2V7	Faecalibacterium_phage	31.8	4.3e-06
WP_003810206.1|1916186_1916573_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_003810207.1|1916579_1916870_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_010930701.1|1917005_1917305_+	YciI family protein	NA	NA	NA	NA	NA
WP_010930702.1|1917373_1918276_+	EamA family transporter	NA	NA	NA	NA	NA
WP_010930703.1|1918279_1919050_+	anion permease	NA	NA	NA	NA	NA
WP_019248436.1|1919435_1919885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1919952_1920903_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010926318.1|1921264_1922176_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853568.1|1922401_1923919_+	succinate CoA transferase	NA	NA	NA	NA	NA
WP_010930705.1|1925150_1926113_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019248843.1|1926201_1926450_+	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_010930866.1|1933028_1935776_+	autotransporter Vag8	NA	NA	NA	NA	NA
WP_010930865.1|1935796_1936420_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_003813199.1|1936431_1936902_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_003813196.1|1936913_1937300_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_010930864.1|1937361_1937955_-	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_010930863.1|1937945_1938857_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930862.1|1938872_1940213_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930861.1|1940280_1941012_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853666.1|1941166_1942687_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_023853659.1|1942759_1944103_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_076879554.1|1944137_1945463_-	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930857.1|1945644_1946577_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_010930856.1|1946587_1948081_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930855.1|1948077_1949001_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930854.1|1949003_1950266_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_047122810.1|1950285_1951299_-	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930852.1|1951371_1951662_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930851.1|1951691_1952966_-	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_162268683.1|1952947_1953091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1953108_1954059_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930850.1|1954055_1955693_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_003813165.1|1955697_1956537_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930849.1|1956533_1957550_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930848.1|1957657_1959232_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930847.1|1959651_1961196_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930846.1|1961300_1962368_+	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930845.1|1962386_1963973_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930844.1|1963969_1965160_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003813149.1|1966732_1967221_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813147.1|1967280_1968138_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930843.1|1968200_1969151_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930842.1|1969213_1970203_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813142.1|1970277_1971159_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930841.1|1972216_1973068_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010930840.1|1973084_1973654_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930839.1|1973684_1974548_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930838.1|1974707_1975784_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_029443740.1|1975848_1977546_+	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003820286.1|1977562_1978393_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_010930836.1|1978421_1979444_+	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1979973_1980924_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2027241	2075256	4110608	tRNA,transposase	Moraxella_phage(18.18%)	42	NA	NA
WP_010930522.1|2027241_2028192_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|2028290_2030891_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|2030997_2032002_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|2032110_2033451_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|2033491_2034520_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|2034715_2035261_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|2035257_2035818_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|2035916_2036867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|2036904_2037492_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|2037509_2037893_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|2039252_2040545_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|2040679_2041720_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|2041817_2042834_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003811015.1|2043101_2043749_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|2043874_2044633_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|2044617_2045397_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|2045414_2046299_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|2046295_2047075_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_010930528.1|2047179_2047779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|2048067_2048820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|2048938_2050339_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|2050362_2050761_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|2050936_2051137_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|2051275_2052004_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|2052137_2053553_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|2053556_2054420_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|2054432_2055182_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_019247881.1|2055364_2057380_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247882.1|2057361_2058030_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|2058804_2059755_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2059853_2060804_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|2060952_2061291_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|2061348_2061510_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|2061541_2061742_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|2062007_2064581_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|2064651_2067201_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|2069751_2070240_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2070331_2071483_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|2071536_2072358_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2072396_2073626_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|2073754_2074195_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|2074305_2075256_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2136818	2196088	4110608	tRNA,transposase,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|2136818_2137769_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2137893_2138703_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2138903_2139854_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|2141127_2142345_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|2143401_2144304_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|2144380_2145253_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|2145383_2145752_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|2145809_2146856_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|2147051_2148308_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|2148312_2149650_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|2149799_2150756_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|2150858_2151791_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|2151906_2152227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|2152219_2152579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|2152626_2154201_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|2154253_2155198_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|2155215_2156046_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|2156038_2157673_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|2157669_2159025_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|2159931_2161509_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|2161512_2162787_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|2162884_2163259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|2164974_2166108_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|2166145_2166751_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|2166747_2167566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|2167637_2170262_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|2170248_2170503_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|2170569_2171151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|2171454_2171715_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|2171880_2172504_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|2172503_2173277_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|2173273_2174482_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|2174507_2174981_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|2175054_2176005_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2176103_2177054_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|2177152_2178502_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|2179267_2180023_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|2180115_2182998_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|2183320_2183746_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|2183773_2184922_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|2184918_2185425_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|2185431_2186727_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_023995843.1|2186785_2188072_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|2188073_2188712_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|2188714_2189875_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|2189901_2191257_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|2191260_2192331_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|2192469_2192706_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|2192793_2193900_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|2193865_2195170_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|2195188_2196088_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 20
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2206328	2249602	4110608	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|2206328_2207279_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2207377_2208328_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|2208527_2209613_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|2209628_2210390_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170954295.1|2210386_2211346_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_010930780.1|2211408_2211909_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|2211941_2212685_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|2212780_2213020_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|2213033_2213186_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|2213271_2214762_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|2214853_2215792_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|2215788_2215965_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|2215967_2216630_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|2218251_2218395_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|2218391_2219366_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|2219260_2219515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2219532_2220483_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|2220479_2221754_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|2221857_2223051_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|2223047_2223701_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|2223697_2225134_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|2225121_2225481_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|2226295_2226436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2226453_2227404_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|2227400_2229266_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2229523_2231044_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2231131_2231782_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930766.1|2232730_2234026_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2234047_2234932_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2235030_2235906_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2235895_2236252_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|2236382_2237357_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2237486_2237666_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2237763_2238288_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2238298_2239135_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2239247_2239619_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2239615_2240167_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2240182_2241874_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2241922_2242603_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2242850_2243315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2243484_2244414_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2244426_2245074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2245147_2246965_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2247048_2247999_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2248651_2249602_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2266928	2337070	4110608	transposase	Vibrio_phage(25.0%)	60	NA	NA
WP_005013747.1|2266928_2267879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247855.1|2268364_2268541_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812044.1|2269225_2270197_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930746.1|2270200_2271055_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_010930745.1|2271073_2271895_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_019247853.1|2271926_2272721_+	amidase	NA	NA	NA	NA	NA
WP_076879628.1|2272769_2273375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247851.1|2273332_2274166_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930744.1|2274451_2275957_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_003812032.1|2275998_2276781_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_003812030.1|2276850_2277297_-	membrane protein	NA	NA	NA	NA	NA
WP_010930743.1|2277293_2278520_-	NnrS family protein	NA	NA	NA	NA	NA
WP_003812026.1|2278512_2278917_-	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_003812024.1|2279076_2279379_+	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_005013747.1|2279375_2280326_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|2280547_2281498_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|2281596_2282562_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|2282699_2283599_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2286193_2287681_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2287691_2288888_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2288960_2290280_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2290276_2291152_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|2291182_2292331_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2292348_2292663_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2292684_2293407_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2293406_2294225_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2294229_2294757_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|2294762_2296019_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2296377_2297517_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2297594_2298467_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|2299337_2300288_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|2300247_2300883_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|2301242_2302565_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|2302883_2303705_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2305129_2305702_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2305741_2307571_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2307533_2308592_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2308629_2309091_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2309175_2309922_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2311412_2314643_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2314709_2316041_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2316293_2316668_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2316770_2317949_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2317959_2318550_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2318660_2319467_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2319492_2320287_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2321287_2322262_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2322420_2322933_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2323089_2324061_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2325805_2326612_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930716.1|2326608_2327910_-	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930715.1|2327860_2328625_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2328738_2329509_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2329593_2330781_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2330853_2331228_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_003810308.1|2331328_2332591_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2332587_2333445_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2333617_2334619_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2335070_2336021_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2336119_2337070_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2509254	2564734	4110608	tRNA,transposase	Planktothrix_phage(40.0%)	51	NA	NA
WP_005012067.1|2509254_2510205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2510684_2511341_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2511355_2513023_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2513025_2513655_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2513866_2514961_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2515105_2515918_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2515921_2517625_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2517675_2518806_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2518992_2520069_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2520150_2520801_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2520815_2522219_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2522502_2523321_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2523317_2524022_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2524921_2526037_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2526070_2526445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2526467_2527625_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2527637_2527871_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2528505_2531475_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2531489_2531699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2531850_2532480_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2532476_2534567_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2534590_2535271_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2535267_2535828_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2535834_2536932_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2537084_2537678_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2537674_2538967_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2538980_2539523_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2539532_2540369_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2540402_2541464_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2541505_2542558_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2542573_2542876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2543017_2543968_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2543985_2544150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2544146_2545841_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2545837_2546923_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2546970_2547870_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2547880_2548525_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2549546_2552789_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2552799_2553954_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2554180_2555143_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2555241_2556192_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2556290_2557241_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2557250_2557940_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2557999_2558437_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2558482_2559376_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930742.1|2559525_2560476_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811746.1|2560472_2561645_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2561641_2562796_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2562992_2563343_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2563332_2563767_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_005015810.1|2563783_2564734_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2610827	2677327	4110608	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2610827_2611778_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2612147_2612720_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2612722_2613733_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2613725_2614226_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2614236_2614578_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2614589_2615381_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2615397_2615667_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2615689_2616478_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2616524_2617541_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2617757_2619200_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2619378_2620998_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2621118_2622939_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2623017_2624550_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2624583_2626230_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2626299_2627322_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2627339_2628473_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2628475_2629165_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2629164_2629950_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2629993_2630758_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2630796_2632218_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2632283_2632988_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2633035_2633455_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2633467_2633875_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2634058_2634769_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2634895_2635186_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2635203_2635686_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2640191_2641346_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2641651_2642668_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2642914_2643703_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2643769_2644450_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2644446_2645217_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2645315_2646266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2646321_2647239_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2647249_2648428_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2648447_2649443_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2651031_2651640_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2651627_2652668_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2652685_2653648_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2653644_2654838_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2654834_2655632_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2655657_2656644_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2656662_2658702_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2658903_2659584_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2659597_2660509_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2660505_2661084_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2661222_2662128_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2662135_2665555_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2665542_2668143_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2669098_2669731_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2670124_2670883_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2670879_2672082_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2672269_2673220_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2674127_2675273_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2675259_2676015_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2676131_2676311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2676376_2677327_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2876715	2950040	4110608	transposase,tRNA,protease	Catovirus(22.22%)	53	NA	NA
WP_010930211.1|2876715_2878071_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2879549_2880272_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2880326_2881310_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2881439_2882390_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2882386_2883289_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2883376_2884135_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2884147_2885239_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2885336_2886764_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2886993_2888208_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2888253_2891124_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2893534_2894023_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2894148_2896845_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2896999_2899282_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|2899455_2900079_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|2900177_2901128_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2901174_2901729_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2901796_2902642_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2902711_2903680_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023995083.1|2903679_2904543_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|2907375_2911302_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2912037_2915268_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2915549_2916377_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2916410_2917106_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2917098_2918379_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2918388_2919366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2919347_2921048_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2921150_2922254_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2922284_2923040_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2923046_2924567_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2924609_2924912_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2924908_2925541_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2925619_2927485_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2927481_2928276_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2928304_2929420_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2930324_2931203_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2931202_2932027_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2932194_2933145_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2933357_2936207_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2936188_2936917_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2937057_2938521_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2938517_2938889_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2938906_2940220_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2940256_2940715_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_155120815.1|2940669_2940810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2940827_2941778_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2941774_2942788_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2942927_2943914_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2944272_2944980_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2945560_2946511_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2946662_2947265_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2947283_2947916_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2947960_2948212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2948153_2950040_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
>prophage 25
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	2961765	3012427	4110608	tRNA,holin,transposase	uncultured_Mediterranean_phage(50.0%)	43	NA	NA
WP_005013747.1|2961765_2962716_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2962742_2963207_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2964413_2966702_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2966818_2967691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2967733_2968888_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2968922_2969753_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2969836_2971381_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2971423_2971783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2971784_2972198_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2972238_2972556_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2972640_2973357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2973620_2975042_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2975108_2977856_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2978188_2979205_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2979540_2980182_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2980272_2981709_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2981866_2982940_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|2982936_2984073_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|2984217_2984562_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|2984628_2986509_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|2986558_2987494_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|2987826_2988843_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2989780_2991208_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2991204_2992227_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2992216_2992690_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|2992830_2993718_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2993714_2995358_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|2995354_2996404_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|2997192_2998209_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2998308_2998941_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2998949_2999339_-	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2999391_3000444_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|3001307_3003014_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|3003087_3003588_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3003602_3005660_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3005686_3005980_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3006081_3007029_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3007041_3007917_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3008037_3008598_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3008632_3008956_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3009391_3010129_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3010427_3011378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3011476_3012427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	3033378	3105878	4110608	transposase	Bacillus_virus(16.67%)	58	NA	NA
WP_010929584.1|3033378_3034329_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3034371_3035547_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3035768_3037559_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3037571_3039233_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3039245_3041951_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3042243_3043998_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3043994_3044621_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3044617_3045469_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3045544_3047659_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3047845_3048460_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3048605_3048857_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3048926_3050309_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3050305_3053485_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3054292_3055210_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3055261_3055993_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3056052_3056625_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3058133_3059150_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3059287_3060337_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3060441_3061392_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3061487_3062213_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3062423_3062804_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3063109_3063982_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3063989_3064370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3064523_3065798_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3067285_3068194_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3068991_3070056_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3071898_3072900_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3073122_3073764_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3073846_3075673_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3075916_3076846_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3076845_3077595_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3077666_3078581_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3078600_3079746_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3079806_3080718_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010929591.1|3080798_3081749_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3081847_3082432_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3082466_3083456_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3083452_3084394_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3084390_3085611_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3085653_3085968_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3086159_3086519_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3086520_3088236_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3088423_3089095_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3089109_3090438_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3090434_3091334_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3091420_3092506_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|3092498_3093632_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|3093631_3096313_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3096683_3097265_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3097390_3098116_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3098112_3098790_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3099005_3100187_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3100959_3101142_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3101171_3102122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3102251_3102644_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3102920_3103832_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3103956_3104931_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3104927_3105878_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	3119385	3172903	4110608	holin,transposase	Bacillus_phage(33.33%)	44	NA	NA
WP_010930066.1|3119385_3120336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3120448_3120700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3121205_3122324_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3122443_3122656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3122815_3123037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3123089_3124040_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3125216_3126587_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3126619_3127411_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3127423_3128479_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3128504_3129380_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3129485_3129734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3129768_3131223_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3131219_3131741_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3131769_3133122_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3133345_3136234_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3138378_3139680_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3139694_3140411_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3140692_3141373_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3141384_3141552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3141660_3141807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3141900_3142560_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3142958_3144791_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3144787_3145738_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3146901_3148617_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3148627_3149119_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3149191_3150208_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3150375_3151155_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3151173_3151701_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3151994_3152264_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3152354_3154514_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3154634_3155354_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3155350_3156301_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813999.1|3156441_3157659_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_010930016.1|3157652_3158264_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813997.1|3158897_3159875_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813996.1|3160018_3160765_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_010930017.1|3160786_3161233_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_010930018.1|3162020_3164252_+|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_003813993.1|3164274_3165075_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813992.1|3165356_3166589_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813991.1|3166699_3167689_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|3167719_3169108_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813988.1|3170706_3171690_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023994644.1|3171886_3172903_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	3237361	3310523	4110608	transposase	Klosneuvirus(16.67%)	57	NA	NA
WP_041337087.1|3237361_3238312_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3238308_3239328_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3239337_3242046_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3242193_3242850_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3242948_3243899_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3244046_3244940_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3245139_3246834_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3246868_3247795_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3247863_3248961_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3248979_3249843_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3249854_3250637_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3250633_3251752_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3251748_3253281_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3253321_3254329_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3254473_3255196_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3255211_3256234_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3256550_3257285_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3257369_3259115_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3259111_3259864_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3259908_3260865_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3260953_3261520_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3261527_3262388_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3262417_3263146_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3263177_3263861_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3264698_3265613_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3265677_3266586_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3266676_3268101_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3268102_3269425_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3269421_3271560_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3271637_3276758_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3276858_3277167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3277236_3277794_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3277809_3279291_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929992.1|3281461_3282799_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3282833_3284831_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3284848_3286897_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3287027_3287894_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3288162_3289128_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3289242_3290391_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_003807462.1|3290815_3291127_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3291160_3291421_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3291570_3292704_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3292774_3293911_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3294076_3294871_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3294933_3295377_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3295492_3296443_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3296544_3296973_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3297045_3299241_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3299462_3300413_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3300372_3300897_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3301028_3302000_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3302119_3304564_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3304579_3305170_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3305413_3306364_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3306521_3307787_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3307820_3308918_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3309572_3310523_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	3321810	3421923	4110608	terminase,tRNA,protease,tail,transposase	uncultured_Caudovirales_phage(14.29%)	108	NA	NA
WP_005012067.1|3321810_3322761_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3323492_3323870_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3323854_3324556_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3324699_3325392_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3325391_3326495_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3326604_3328977_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3328973_3330533_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3330557_3331355_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3331386_3332532_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3332636_3334079_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3334081_3335311_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3337448_3338399_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3339528_3340086_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3340061_3340412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3340580_3341375_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3341371_3342421_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3342420_3343110_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3343196_3343694_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3343725_3345042_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3345058_3346033_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3346069_3346528_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3346527_3347208_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3347210_3347639_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3347691_3349422_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3349487_3350060_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3350040_3350727_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3351082_3351754_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3352082_3352304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3352303_3352585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3352581_3353097_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3353096_3353648_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3353626_3353869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3353873_3354686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3354685_3354949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3354989_3355187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3355167_3355584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3355588_3359545_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3359537_3359927_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3359923_3360457_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3360524_3360884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3360893_3363506_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3363531_3363822_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3363839_3364169_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3364178_3364697_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3364951_3365452_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3365459_3365882_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3365878_3366277_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3366273_3366669_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3366668_3366869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3366870_3367353_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3367415_3367667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3368341_3369292_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3369720_3370323_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3370445_3370688_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3370693_3371749_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3371777_3373196_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3373198_3374476_-|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3374462_3374948_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3375587_3376538_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3376555_3376777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161633094.1|3376794_3377484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3377476_3377728_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3378282_3378894_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3378965_3379172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3379423_3380374_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3380472_3381546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3381713_3382508_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3382547_3383072_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3383064_3384807_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3385016_3385775_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3385777_3386485_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3386501_3387383_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3387393_3388152_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3388120_3388876_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3388945_3390364_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3390385_3391036_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3391169_3391505_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3391593_3392544_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3392620_3394441_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3394445_3395519_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3395641_3396610_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3396683_3397595_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3397613_3398186_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3398266_3398815_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3398814_3400404_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3400473_3400713_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3400753_3401779_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3401844_3403026_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3403122_3403575_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3403584_3404925_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3405241_3406279_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3406660_3407020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3407103_3408045_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3408119_3409070_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3409363_3410458_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3410539_3411421_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3411442_3412282_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3412357_3413875_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3413971_3415072_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3415088_3415511_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3415533_3415746_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3415792_3416713_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3416895_3417645_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3417647_3417977_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3418183_3419617_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3419628_3420012_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3420073_3420874_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3420972_3421923_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
NZ_CP011694	Bordetella pertussis strain H346 chromosome, complete genome	4110608	4032779	4092969	4110608	transposase	Planktothrix_phage(28.57%)	52	NA	NA
WP_010931661.1|4032779_4033730_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4033899_4035126_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4035325_4036192_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4036184_4037147_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4037247_4038198_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4038296_4039247_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4039243_4040737_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4040733_4043841_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4043837_4046906_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4046902_4048153_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4048333_4049095_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4049127_4049778_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4049780_4050620_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4050860_4051604_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4051686_4052034_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4052131_4052974_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4053018_4053906_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4053932_4054121_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4054218_4055676_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4055662_4057189_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4057207_4057675_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4057674_4058697_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4058817_4059537_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4059612_4060713_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4060714_4061905_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4062024_4063041_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4063359_4064031_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4064027_4064936_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4065147_4065795_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4069646_4070723_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4070733_4071543_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4071632_4072406_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4072406_4072571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4072588_4073539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4073427_4074450_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4074439_4075594_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4075633_4077046_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4077170_4078037_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4078038_4078863_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4078859_4079621_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4079701_4080388_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4080561_4081569_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4081565_4082345_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4082402_4083665_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4084211_4085162_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816030.1|4085293_4086733_+	catalase	NA	A0A2K9L0T1	Tupanvirus	40.8	2.4e-106
WP_010927255.1|4086793_4087675_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931681.1|4087671_4088487_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.4	6.1e-30
WP_010931682.1|4088488_4089532_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003816037.1|4089575_4090499_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_019248557.1|4090628_4091828_-	amidohydrolase	NA	NA	NA	NA	NA
WP_005013747.1|4092018_4092969_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
