The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	27282	70036	4104277	tRNA,transposase	Synechococcus_phage(50.0%)	42	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010930208.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	77634	136108	4104277	tRNA,transposase	Planktothrix_phage(22.22%)	53	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|101866_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132700_132985_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	164893	287973	4104277	tRNA,transposase,protease	Klosneuvirus(11.76%)	105	NA	NA
WP_005015810.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169079_170510_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170543_171173_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
WP_005012067.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176986_177802_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181336_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182425_184330_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184326_188001_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188632_189055_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189082_189502_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189530_189977_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190755_193026_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193101_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195458_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197378_198479_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198560_198935_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198994_201859_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205635_206586_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206742_207066_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207170_208211_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208216_208996_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211224_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219054_221898_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|225502_226453_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|226671_227367_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|227383_228796_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|228908_230339_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|230380_232294_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|232612_233179_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|233269_234271_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_005012067.1|234385_235336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235422_236373_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|236369_237320_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|237418_238216_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|239165_239576_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|240597_241341_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|241384_242428_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|242598_244701_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|246111_247068_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|247086_247578_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|247574_248930_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|248930_249629_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|249625_250327_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|250579_251629_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|251734_252676_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252672_254562_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|254648_255287_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|255429_256815_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256745_257282_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257433_258825_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258841_259822_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259957_260941_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261005_261905_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262011_263766_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263773_264898_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264911_265892_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|266622_267573_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268132_268678_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|268803_270381_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270396_271551_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271564_271690_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271686_273438_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273434_275114_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275176_275725_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276867_277146_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|278189_279140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|279126_279342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|279417_279579_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|280245_280695_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|280704_281316_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|281474_282323_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|282348_283731_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|283795_284437_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|284576_285035_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|285059_285836_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|285889_287026_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|287022_287973_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	556358	615658	4104277	tRNA,transposase	Acinetobacter_phage(27.27%)	47	NA	NA
WP_023852617.1|556358_557309_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|558632_559409_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|559443_561216_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|561217_562120_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|562244_562604_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|562635_563598_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|563696_564647_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|564659_565595_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|565654_566494_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|566490_567660_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|567656_568946_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|568988_569363_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_023852620.1|569477_570206_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|570213_570918_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|571181_572702_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|572757_573321_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|573339_574371_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|574367_575156_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_023997720.1|575331_576321_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|578077_579028_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|580250_581153_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|581154_582009_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|582055_583165_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|583175_583694_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|583723_584356_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|584427_585087_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_023852703.1|585083_586223_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|586572_587445_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|587600_588338_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931369.1|588340_589972_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|590067_591057_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|591053_591764_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|591859_592876_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|593147_593774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|593829_594957_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|594962_600680_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|601247_602192_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|602380_603316_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|603433_605005_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|605084_606293_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|606790_607708_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|610068_610290_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|610620_611637_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|611721_611973_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|611976_612792_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|612904_613783_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|613894_615658_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 6
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	621813	675550	4104277	transposase	Salmonella_phage(33.33%)	48	NA	NA
WP_010930179.1|621813_622764_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|622859_623831_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|623835_624516_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|624653_625046_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|625153_626170_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|626405_627191_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|627285_628695_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|628705_629506_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|629526_630297_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|630339_630807_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|630803_631754_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|633702_634581_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|635507_638486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|638839_639790_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|639786_640875_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|640910_641774_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|642913_643303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|643306_644089_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|644122_644908_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|645183_646323_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|646319_647111_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|647107_647857_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|647853_648726_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|648725_649727_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|649723_650887_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|650912_651596_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|651549_652884_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|652876_653971_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|654737_655688_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|657628_658888_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|658884_660423_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|660419_661616_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931342.1|661612_662989_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|663000_664017_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|664085_665321_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|665421_666216_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|666585_666993_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|667410_667683_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|667852_668077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|668264_669119_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|669219_669522_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814828.1|669566_670184_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|670200_670509_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|670505_672221_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|672223_672841_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|672941_673526_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|673550_674195_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|674599_675550_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	724488	765487	4104277	tRNA,transposase,integrase,protease	Pseudomonas_phage(33.33%)	30	721736:721754	741624:741642
721736:721754	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931308.1|724488_725085_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|725081_725864_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|725936_727028_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|727307_728435_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|728776_729823_+	Fic family protein	NA	NA	NA	NA	NA
WP_019247951.1|730333_733090_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|733091_736043_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|736058_737270_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|737266_737467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|737453_738404_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|738420_738915_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|738918_739176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|739719_740631_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|740712_740997_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|741780_742731_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
741624:741642	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|743149_745714_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|745758_747612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|747944_749516_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|750957_751908_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|751993_752734_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|752960_753908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|755295_756246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814139.1|756439_757255_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931299.1|757387_758827_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814142.1|758840_759182_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931298.1|759236_760892_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814146.1|761043_762054_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814148.1|762186_762960_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|763487_764438_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|764536_765487_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	775414	823032	4104277	tRNA,transposase,holin,protease	Bovine_alphaherpesvirus(10.0%)	46	NA	NA
WP_005012808.1|775414_776365_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818450.1|776503_777256_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_023853440.1|777530_779219_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	1.6e-48
WP_004566001.1|779238_780498_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931274.1|780512_781607_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_010931275.1|781603_783667_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.3e-14
WP_010931276.1|783742_784423_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_003807204.1|784700_786074_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_003818444.1|786075_787095_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003818443.1|787158_788130_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|788194_789145_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807199.1|789243_790086_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_010931277.1|790085_790421_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010931278.1|790491_791910_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
WP_003807194.1|792189_793230_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_003818441.1|793309_793561_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_010925730.1|793671_794835_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.8	5.0e-126
WP_010931279.1|795118_795973_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010931280.1|795969_796860_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_003807183.1|796902_797814_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_010931281.1|797840_798533_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_010931282.1|798547_799528_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
WP_010931283.1|799540_801682_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003818434.1|801730_802699_-	putative membrane protein	NA	NA	NA	NA	NA
WP_019247300.1|802689_803358_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_010931286.1|803318_804254_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931287.1|804250_805147_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_010931288.1|805143_805866_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
WP_019248127.1|805856_806021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807166.1|806194_806698_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_010931290.1|806974_808090_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_003807164.1|808232_808697_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_010931291.1|808844_809384_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003807162.1|809405_810740_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_003807161.1|810753_811059_-	copper-binding protein	NA	NA	NA	NA	NA
WP_023853416.1|811483_812065_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|812146_813097_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|813195_814146_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814620.1|814586_815492_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931271.1|815547_817155_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_010931270.1|817408_818914_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_003820744.1|818928_819393_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_005012067.1|819682_820633_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820745.1|820795_821326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|821325_821637_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_005012808.1|822081_823032_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	998889	1101282	4104277	tRNA,transposase	Bacillus_virus(27.27%)	93	NA	NA
WP_003813026.1|998889_1000005_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_003813022.1|1000105_1000924_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010931185.1|1001021_1001633_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010931184.1|1001792_1003169_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	2.2e-109
WP_003813017.1|1003231_1003690_+	cytochrome c	NA	NA	NA	NA	NA
WP_003813013.1|1003774_1004470_-	cytochrome b561	NA	NA	NA	NA	NA
WP_003813010.1|1004531_1004813_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931182.1|1005375_1006128_+	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_003813006.1|1006172_1007249_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005012067.1|1007245_1008196_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1008298_1008961_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1009055_1009226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1009578_1010580_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1010582_1011779_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1011799_1012603_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|1012683_1012980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1013010_1013574_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1013614_1014472_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1014479_1015229_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1015250_1016123_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1016151_1016931_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1016964_1017762_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1020416_1020809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1020802_1021663_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1021666_1022629_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1023405_1024095_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1024955_1025906_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1026255_1027125_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1027195_1027891_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1027880_1028390_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1028386_1029607_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1029554_1030457_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1031343_1032630_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1032668_1034042_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1034080_1034782_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1035080_1036070_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1036170_1036632_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1036647_1037196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|1037337_1038813_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1038918_1040010_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1040013_1040796_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1040805_1041594_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1042719_1043154_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1043150_1044161_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1044204_1045131_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1045417_1045786_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|1046002_1046953_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1046997_1049424_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1049472_1050165_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1050237_1051437_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1051454_1052360_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1052475_1053405_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1053430_1054777_+	MFS transporter	NA	NA	NA	NA	NA
WP_019247888.1|1054789_1055554_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.5	3.1e-12
WP_010931159.1|1055567_1056350_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1056542_1057493_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1057554_1058664_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1059176_1060013_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931157.1|1060139_1061048_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1061044_1061995_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|1062380_1062923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1063958_1064909_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1065150_1065519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1065564_1066689_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|1067823_1068564_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1068667_1069288_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1069391_1070342_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1070338_1072447_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1072591_1073251_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1073282_1073747_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1074022_1074208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1074259_1075012_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1075018_1076281_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1076322_1077561_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1078638_1079766_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1079776_1080604_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1080590_1081457_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1082823_1083228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1083319_1084270_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446288.1|1084639_1085551_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1085565_1086276_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1086272_1087517_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1087518_1087953_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1087981_1088287_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1088385_1089336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|1089392_1090541_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1090621_1091572_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1092103_1092901_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1092948_1093602_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1093558_1094647_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1094811_1097037_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1099314_1100211_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1100331_1101282_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1131668	1202639	4104277	transposase,protease	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
WP_005012808.1|1131668_1132619_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1132675_1133788_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1136171_1137122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1137712_1138489_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1138606_1138870_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1138970_1139975_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1140175_1141777_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1141802_1142561_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1142652_1143309_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1143399_1144164_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1144173_1144362_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1144417_1145461_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1145457_1145871_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1145867_1146488_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1146768_1147719_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1147886_1149278_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1149350_1149929_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1150045_1151443_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1151558_1152764_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1152863_1153382_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1153476_1153722_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1153949_1154264_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_023853340.1|1154362_1159543_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1159539_1161708_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1161763_1164079_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1164083_1165403_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1165421_1167095_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1167099_1167768_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1167924_1171746_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|1172076_1173027_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1173048_1174194_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1174342_1175272_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1175268_1176357_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1176353_1177157_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1177153_1177885_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1177942_1179232_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1179328_1179931_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1184484_1184823_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1185530_1185797_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1187503_1188454_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1188450_1189782_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1191042_1193043_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1193035_1193677_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1193673_1194081_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1194077_1194878_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1194952_1195657_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1195688_1196483_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1196479_1197430_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1197528_1198479_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1198577_1199012_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1199094_1201431_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010929632.1|1201622_1202639_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1250033	1330908	4104277	tRNA,transposase	Bacillus_virus(25.0%)	58	NA	NA
WP_010927663.1|1250033_1250984_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1250980_1251931_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1252191_1253220_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1253299_1254598_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1254594_1255176_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1255488_1259535_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1259775_1267437_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1267433_1268384_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1269523_1269997_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1270136_1270757_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931063.1|1270892_1271693_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1271747_1272839_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931062.1|1272860_1273304_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1273332_1273965_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1274075_1274492_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1274484_1275177_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1275283_1275658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931058.1|1275734_1276544_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1276639_1277584_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1277622_1278594_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1278684_1279122_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1279180_1280062_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1281065_1281926_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1281958_1283341_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1283337_1284357_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1284729_1285224_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1285231_1285972_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1286052_1287657_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1287696_1288485_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_023995127.1|1288610_1290776_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.9e-14
WP_010931047.1|1291656_1292469_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1292481_1292790_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1292907_1294638_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931045.1|1294639_1295842_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931044.1|1295914_1296583_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1296704_1297172_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1297307_1298690_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1298686_1299811_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1299807_1302444_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1302859_1303810_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1307556_1308168_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1308390_1309851_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1309947_1311540_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1311893_1312151_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1312152_1313493_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1313588_1314278_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1314290_1315721_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1317445_1318267_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1318277_1319849_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1319877_1320855_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1320881_1321685_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1321681_1322476_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1322483_1323719_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_019247978.1|1323732_1324146_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1324895_1325846_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1326467_1328195_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1328306_1329665_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005013747.1|1329957_1330908_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1450303	1514519	4104277	tRNA,transposase,protease	Salmonella_phage(16.67%)	59	NA	NA
WP_005013747.1|1450303_1451254_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814065.1|1451420_1451774_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1451786_1452149_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1452190_1452616_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1452818_1454075_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1454273_1455254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1455403_1456645_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1456743_1457694_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1457702_1458398_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1461219_1461819_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1461829_1463995_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1464018_1465803_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1465802_1465892_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1466586_1466859_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1466858_1468925_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1468921_1469872_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1469970_1470921_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1471036_1471369_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1471365_1472052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1472038_1472998_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010930947.1|1473030_1475400_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1475399_1476032_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1476133_1477474_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1477520_1478876_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_005014990.1|1479166_1479403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1479590_1479908_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1480180_1480696_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814021.1|1480966_1481722_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1482060_1482267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1482274_1482934_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1483228_1485433_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1485543_1486767_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1486889_1487864_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1487931_1489125_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1489139_1489940_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1489936_1491793_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1491789_1492395_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1492413_1493799_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1494524_1495751_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1495839_1496622_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1496720_1497671_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1497697_1498471_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1498482_1499724_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930938.1|1501540_1502368_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_010930937.1|1502369_1503080_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003821345.1|1503076_1503676_-	septum formation protein Maf	NA	NA	NA	NA	NA
WP_010930936.1|1503784_1504378_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003813827.1|1504429_1504612_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_003821347.1|1504668_1505727_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_010930935.1|1505726_1506713_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_010930934.1|1506794_1507730_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_003813819.1|1507731_1508484_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
WP_003813816.1|1508666_1508906_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
WP_003813802.1|1509095_1510325_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_010930933.1|1510326_1510827_+	membrane protein	NA	NA	NA	NA	NA
WP_003813797.1|1510823_1511423_+	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
WP_023853242.1|1511435_1511936_+	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_010930931.1|1511935_1512994_+	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_004566381.1|1513031_1514519_+|protease	DegQ family serine endoprotease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
>prophage 13
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1744254	1801533	4104277	tRNA,transposase	Klosneuvirus(14.29%)	49	NA	NA
WP_010930522.1|1744254_1745205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1745303_1747904_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1748010_1749015_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1749123_1750464_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1750504_1751533_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1751728_1752274_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1752270_1752831_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1752929_1753880_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1753917_1754505_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|1754522_1754906_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|1756265_1757558_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1757692_1758733_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1758830_1759847_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_023852762.1|1760114_1760750_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1760887_1761646_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|1761630_1762410_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|1762427_1763312_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1763308_1764088_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|1764114_1764792_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1765080_1765833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1765951_1767352_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1767375_1767774_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1767949_1768150_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1768288_1769017_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1769150_1770566_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1770569_1771433_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1771445_1772195_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_010930531.1|1772437_1774393_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_019247882.1|1774374_1775043_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|1775817_1776768_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1776916_1777255_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1777312_1777474_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1777505_1777706_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1777971_1780545_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|1780615_1783165_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|1785715_1786204_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1786295_1787447_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1787500_1788322_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1788360_1789590_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1789718_1790159_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|1790269_1791220_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930538.1|1791216_1791690_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446178.1|1791851_1792790_+	membrane protein	NA	NA	NA	NA	NA
WP_010930540.1|1792791_1794000_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_010930541.1|1794104_1794611_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930542.1|1794613_1797475_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930543.1|1797464_1798430_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_076879626.1|1798489_1800484_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_005012067.1|1800582_1801533_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1852782	1912052	4104277	tRNA,transposase,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1852782_1853733_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1853857_1854667_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|1854867_1855818_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1857091_1858309_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1859365_1860268_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1860344_1861217_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1861347_1861716_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1861773_1862820_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1863015_1864272_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1864276_1865614_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1865763_1866720_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1866822_1867755_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1867870_1868191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1868183_1868543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1868590_1870165_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1870217_1871162_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1871179_1872010_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1872002_1873637_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1873633_1874989_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1875895_1877473_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1877476_1878751_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1878848_1879223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1880938_1882072_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_023998862.1|1882109_1882715_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1882711_1883530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1883601_1886226_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1886212_1886467_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1886533_1887115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1887418_1887679_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1887844_1888468_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1888467_1889241_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1889237_1890446_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1890471_1890945_-	RidA family protein	NA	NA	NA	NA	NA
WP_077069090.1|1891018_1891969_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1892067_1893018_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1893116_1894466_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1895231_1895987_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1896079_1898962_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1899284_1899710_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1899737_1900886_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1900882_1901389_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|1901404_1902691_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|1902740_1904036_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1904037_1904676_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|1904681_1905839_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1905865_1907221_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1907224_1908295_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1908433_1908670_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1908757_1909864_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1909829_1911134_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1911152_1912052_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 15
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1922292	1979789	4104277	transposase	Staphylococcus_phage(16.67%)	56	NA	NA
WP_005013747.1|1922292_1923243_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1923341_1924292_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1924491_1925577_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1925592_1926354_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1926350_1927274_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1927372_1927897_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1927905_1928649_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1928744_1928984_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1928997_1929150_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1929235_1930726_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1930817_1931756_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1931752_1931929_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1931931_1932594_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1934215_1934359_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1934355_1935330_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1935496_1936447_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1936443_1937718_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1937821_1939015_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1939011_1939665_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1939661_1941098_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1941085_1941445_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162493101.1|1942259_1942400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930768.1|1943364_1945230_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1945487_1947008_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1947095_1947746_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|1948694_1949990_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1950011_1950896_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1950994_1951870_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1951859_1952216_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|1952346_1953321_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1953450_1953630_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1953727_1954252_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1954262_1955099_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1955211_1955583_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1955579_1956131_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1956146_1957838_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1957886_1958567_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1958814_1959279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1959448_1960378_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1960390_1961038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1961111_1962929_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1963012_1963963_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1964615_1965566_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812199.1|1965584_1965932_-	GFA family protein	NA	NA	NA	NA	NA
WP_010930755.1|1965960_1967400_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_010930754.1|1967418_1967814_-	VOC family protein	NA	NA	NA	NA	NA
WP_003812191.1|1967988_1968597_+	peptidase S16	NA	NA	NA	NA	NA
WP_010930753.1|1968609_1969428_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_010930752.1|1969379_1970354_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812183.1|1970382_1971444_-	XdhC family protein	NA	NA	NA	NA	NA
WP_010930751.1|1971440_1973657_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_010930750.1|1973670_1974129_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003812179.1|1974286_1974631_-	exported protein	NA	NA	NA	NA	NA
WP_010930749.1|1974787_1975693_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930748.1|1975779_1976793_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930153.1|1978772_1979789_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	1995339	2059708	4104277	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|1995339_1996290_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1996511_1997462_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|1997560_1998526_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|1998663_1999563_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2002157_2003645_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2003655_2004852_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2004924_2006244_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2006240_2007116_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|2007146_2008295_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2008312_2008627_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2008648_2009371_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2009370_2010189_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2010193_2010721_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|2010726_2011983_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2012341_2013481_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2013558_2014431_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|2015301_2016252_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|2016211_2016847_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|2017206_2018529_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|2018847_2019669_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2021093_2021666_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2021705_2023535_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2023497_2024556_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2024593_2025055_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2025139_2025886_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2027376_2030607_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2030673_2032005_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2032257_2032632_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2032734_2033913_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2033923_2034514_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2034624_2035431_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2035456_2036251_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2037251_2038226_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2038384_2038897_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2039053_2040025_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2041769_2042576_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010930716.1|2042572_2043874_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930715.1|2043824_2044589_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2044702_2045473_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2045557_2046745_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2046817_2047192_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003810308.1|2047292_2048555_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2048551_2049409_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2049581_2050583_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2051034_2051985_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446265.1|2053548_2054700_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2055068_2055305_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2055368_2055536_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_023853105.1|2055649_2057545_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_062826579.1|2057708_2058659_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2058757_2059708_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2246176	2307524	4104277	tRNA,transposase	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2246176_2247127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2247243_2247963_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2248135_2249122_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2249122_2249605_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2249608_2250892_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2250888_2251827_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2251823_2253533_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2253542_2254790_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2256400_2257690_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_003811719.1|2258827_2259601_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_010930601.1|2260262_2261006_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2261080_2261821_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2262016_2262853_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2262903_2263674_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2263723_2264776_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2264772_2265399_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930596.1|2265395_2266430_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2266608_2267625_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2267723_2268674_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2271414_2272704_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930798.1|2272822_2273260_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2273303_2274512_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2274658_2275123_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2275146_2276097_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2277081_2277855_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2277851_2278850_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2278934_2279711_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2279866_2281471_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2281851_2282976_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2283102_2283726_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2283722_2285624_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2285672_2286467_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2286479_2287481_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_010930514.1|2287477_2287927_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.2	2.0e-06
WP_010930513.1|2287976_2288825_-	hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2288922_2289465_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2289508_2290459_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2290614_2290941_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_033446177.1|2290937_2291219_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2291218_2291698_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2291694_2293323_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2293319_2293664_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2293663_2296597_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2297755_2298706_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2298804_2299101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2299207_2300125_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2300129_2300843_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2300856_2301828_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930505.1|2303577_2303928_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2303931_2305119_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2305557_2306280_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2306573_2307524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2328315	2399469	4104277	transposase	Tetraselmis_virus(10.0%)	54	NA	NA
WP_005012067.1|2328315_2329266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2329818_2331444_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2331493_2332528_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2332530_2333877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2333873_2335388_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2335378_2336389_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2336862_2337804_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2337812_2338781_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2340320_2341289_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2341466_2342456_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2342502_2343261_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2343450_2344188_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_005012808.1|2344286_2345237_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2345421_2346204_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2346197_2346899_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2347138_2347741_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2349067_2350018_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2350014_2351571_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2351563_2352337_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2352395_2353346_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2353427_2354603_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2354616_2356674_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2356670_2357696_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2357707_2358997_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2359019_2360117_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2360113_2361004_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2361000_2363085_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2363116_2364286_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2364327_2365068_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2365067_2365838_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930465.1|2366693_2367479_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2367505_2369590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2369757_2371713_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2372036_2372537_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2372635_2374162_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2374299_2375187_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2375201_2376155_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2376206_2378297_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2378312_2378699_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2381392_2382196_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2383489_2384392_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2384456_2385233_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2385554_2386604_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2386727_2388398_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2388402_2389197_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2389295_2390246_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2390265_2391171_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2391248_2391947_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2392106_2393051_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2393060_2394548_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2394547_2395615_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2395678_2397091_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2397276_2398497_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2398518_2399469_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2495297	2559473	4104277	tRNA,transposase	Planktothrix_phage(28.57%)	56	NA	NA
WP_003812608.1|2495297_2497247_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2497634_2498411_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2498416_2498809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2499230_2500181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2500177_2501275_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2501306_2502257_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2504038_2505280_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2505291_2506065_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2506091_2507042_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2507521_2508178_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2508192_2509860_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2509862_2510492_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2510703_2511798_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2511942_2512755_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_010930383.1|2512758_2514342_-	membrane protein	NA	NA	NA	NA	NA
WP_010930382.1|2514512_2515643_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2515829_2516906_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2516987_2517638_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2517652_2519056_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2519339_2520158_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2520154_2520859_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2521758_2522874_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2522907_2523282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2523304_2524462_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2524474_2524708_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2525342_2528312_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2528326_2528536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2528687_2529317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023994978.1|2529313_2531371_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2531427_2532108_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2532104_2532665_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2532671_2533769_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2533921_2534515_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2534511_2535804_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2535817_2536360_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2536369_2537206_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2537239_2538301_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2538342_2539395_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2539410_2539713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2539854_2540805_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930368.1|2540983_2542678_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2542674_2543760_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2543807_2544707_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2544717_2545362_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2546383_2549626_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2549636_2550791_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2551017_2551980_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_023998563.1|2552078_2553029_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2553038_2553728_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2553787_2554225_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2554270_2555164_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2555211_2556384_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2556380_2557535_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2557731_2558082_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2558071_2558506_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2558522_2559473_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2605566	2669008	4104277	transposase	uncultured_Caudovirales_phage(40.0%)	53	NA	NA
WP_005012067.1|2605566_2606517_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2606615_2607566_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2607935_2608508_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2608510_2609521_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2609513_2610014_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2610024_2610366_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930334.1|2610434_2611169_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2611185_2611455_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2611477_2612266_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2612312_2613329_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2613545_2614988_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2615166_2616786_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2616906_2618727_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2618805_2620338_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2620371_2622018_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2622087_2623110_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2623127_2624261_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2624263_2624953_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2624952_2625738_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2625781_2626546_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2626584_2628006_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2628071_2628776_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2628823_2629243_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2629255_2629663_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2629846_2630557_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2630683_2630974_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2630991_2631474_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2635979_2637134_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_023853536.1|2637439_2638456_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2638702_2639491_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2639557_2640238_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2640234_2641005_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2641103_2642054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2642109_2643027_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2643037_2644216_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2644235_2645231_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2646819_2647428_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2647415_2648456_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2648473_2649436_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2649432_2650626_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2650622_2651420_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2651445_2652432_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2652450_2654490_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2654691_2655372_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2655385_2656297_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2656293_2656872_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2657010_2657916_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2657923_2661343_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2661330_2663931_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2664886_2665519_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2665912_2666671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2666667_2667870_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2668057_2669008_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2835680	2901264	4104277	tRNA,transposase	Oenococcus_phage(33.33%)	52	NA	NA
WP_023853639.1|2835680_2836631_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2836729_2837680_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930231.1|2837882_2838872_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_010930230.1|2838955_2839309_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930229.1|2839386_2839995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811662.1|2841668_2842247_-	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_003811660.1|2842271_2843225_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930228.1|2843264_2844182_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033446252.1|2844303_2845230_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930226.1|2845237_2845984_-	aldolase	NA	NA	NA	NA	NA
WP_010930225.1|2846310_2847252_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930224.1|2847478_2849176_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930223.1|2849610_2851032_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930222.1|2851185_2851965_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247966.1|2852089_2852968_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930220.1|2853073_2854198_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_003811636.1|2854243_2855206_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930219.1|2855198_2856053_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811632.1|2856160_2856571_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929956.1|2856567_2857518_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|2857616_2858498_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|2858575_2859955_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|2859993_2860839_-	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|2860854_2861169_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|2861201_2861738_-	membrane protein	NA	NA	NA	NA	NA
WP_003813585.1|2861910_2862486_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|2862588_2863326_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|2863393_2865031_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|2865138_2865894_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|2865881_2866844_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_033446255.1|2866951_2867746_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|2867807_2869883_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|2870047_2872423_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|2872503_2873859_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2875337_2876060_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2876114_2877098_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2877227_2878178_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2878174_2879077_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2879164_2879923_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2879935_2881027_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2881124_2882552_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2882781_2883996_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2884041_2886912_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2889322_2889811_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2889936_2892633_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2892787_2895070_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|2895234_2895867_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|2895965_2896916_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2896962_2897517_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2897584_2898430_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2898499_2899468_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853221.1|2899467_2901264_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2918834	2979777	4104277	tRNA,transposase,holin	Catovirus(22.22%)	51	NA	NA
WP_010930190.1|2918834_2920355_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2920397_2920700_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2920696_2921329_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2921407_2923273_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2923269_2924064_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2924092_2925208_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2926112_2926991_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2926990_2927815_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2927982_2928933_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2929145_2931995_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2931976_2932705_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2932845_2934309_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2934305_2934677_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2934694_2936008_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2936044_2936503_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2936615_2937566_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2937562_2938576_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2938715_2939702_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2940060_2940768_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|2941348_2942299_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2942450_2943053_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2943071_2943704_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2943748_2944000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2943941_2945828_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2945846_2946689_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2946685_2948044_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2948264_2949059_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2949289_2950783_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2951018_2953100_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2953294_2954335_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2954469_2955486_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2955507_2956365_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2956409_2957186_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_005013747.1|2957553_2958504_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2958530_2958995_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2960201_2962490_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2962606_2963479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2963521_2964676_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2964710_2965541_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2965624_2967169_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2967211_2967571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2967572_2967986_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2968026_2968344_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2968428_2969145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2969408_2970830_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_077075906.1|2970896_2971862_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998885.1|2971954_2974693_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010931363.1|2975025_2976042_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2976377_2977019_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2977109_2978546_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2978703_2979777_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
>prophage 23
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	2984663	3057180	4104277	tRNA,transposase	Pseudomonas_phage(14.29%)	60	NA	NA
WP_010931363.1|2984663_2985680_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2986617_2988045_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2988041_2989064_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2989053_2989527_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|2989667_2990555_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2990551_2992195_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|2992191_2993199_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|2994029_2995046_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2995145_2995778_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2995786_2996176_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2996228_2997281_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|2998144_2999851_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|2999924_3000425_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3000439_3002497_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3002523_3002817_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3002918_3003866_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3003878_3004754_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3004874_3005435_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3005469_3005793_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3006228_3006966_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3007264_3008215_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3008458_3008722_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3008795_3009077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3009093_3009954_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3009950_3010286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3010339_3010990_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|3012670_3013615_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3013660_3013978_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3013980_3014919_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3015096_3015582_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3015600_3016149_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_023994624.1|3016180_3016333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930137.1|3017662_3018304_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3018458_3020807_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3020803_3021742_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3021767_3022958_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3022954_3023728_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3023757_3024951_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3025068_3026079_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3026096_3028133_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3028327_3029068_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929584.1|3029166_3030117_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3030159_3031335_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3031556_3033347_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3033359_3035021_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3035033_3037739_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3038031_3039786_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3039782_3040409_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3040405_3041257_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930125.1|3041386_3043447_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3043633_3044248_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3044393_3044645_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3044714_3046097_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3046093_3049273_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3050080_3050998_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3051049_3051781_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3051840_3052413_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3053921_3054938_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3055075_3056125_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3056229_3057180_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	3076580	3141520	4104277	transposase	Bacillus_phage(18.18%)	57	NA	NA
WP_005012067.1|3076580_3077531_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3077629_3078214_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3078248_3079238_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3079234_3080176_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3080172_3081393_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3081435_3081750_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3081941_3082301_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3082302_3084018_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3084205_3084877_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3084891_3086220_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3086216_3087116_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3087202_3088288_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_023852687.1|3088280_3089411_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930095.1|3089413_3092095_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3092465_3093047_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3093172_3093898_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3093894_3094572_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3094787_3095969_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3096741_3096924_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3096953_3097904_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3098033_3098426_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3098702_3099614_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3099738_3100713_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3100709_3101660_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3101758_3102844_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3102941_3103352_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3103967_3105881_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3106016_3108629_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3108630_3109365_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3109528_3110710_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3110706_3110919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3110915_3111896_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3111941_3112769_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3112918_3114733_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3114787_3115171_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3115167_3116118_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3116230_3116482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810837.1|3116675_3116891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3116987_3118106_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3118225_3118438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3118597_3118819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3118871_3119822_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3120998_3122369_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3122401_3123193_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3123205_3124261_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3124286_3125162_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3125267_3125516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3125550_3127005_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3127001_3127523_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3127551_3128904_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3129127_3132016_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3134160_3135462_+	phospholipase	NA	NA	NA	NA	NA
WP_010930055.1|3135476_3136193_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3136474_3137155_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930052.1|3137682_3138342_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3138740_3140573_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3140569_3141520_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	3233143	3302146	4104277	transposase	Klosneuvirus(16.67%)	55	NA	NA
WP_041337087.1|3233143_3234094_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3234090_3235110_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3235119_3237828_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3237975_3238632_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3238730_3239681_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3239828_3240722_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3240921_3242616_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3242650_3243577_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3243645_3244743_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3244761_3245625_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3245636_3246419_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3246415_3247534_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3247530_3249063_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3249103_3250111_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3250255_3250978_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3250993_3252016_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3252332_3253067_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3253151_3254897_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3254893_3255646_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3255690_3256647_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3256735_3257302_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3257309_3258170_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3258199_3258928_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_023998704.1|3258959_3259643_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3260480_3261395_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3261459_3262368_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3262458_3263883_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3263884_3265207_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3265203_3267342_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3267419_3272540_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3272640_3272949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3273018_3273576_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3273591_3275073_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_077075908.1|3275127_3276981_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3277243_3278581_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3278615_3280613_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3280630_3282679_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3282809_3283676_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3283944_3284910_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3285024_3286173_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3286597_3286909_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3286942_3287203_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3287352_3288486_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3288556_3289693_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3289858_3290653_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3290715_3291159_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3291274_3292225_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699729.1|3292347_3292755_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929984.1|3292827_3295023_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3295244_3296195_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3296154_3296679_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3296810_3297782_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3297901_3300346_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3300361_3300952_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3301195_3302146_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP011239	Bordetella pertussis strain H915 chromosome, complete genome	4104277	3317592	3417705	4104277	terminase,protease,tail,tRNA,transposase	uncultured_Caudovirales_phage(14.29%)	107	NA	NA
WP_005012067.1|3317592_3318543_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3319274_3319652_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3319636_3320338_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3320481_3321174_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3321173_3322277_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3322386_3324759_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3324755_3326315_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3326339_3327137_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3327168_3328314_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3328418_3329861_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3329863_3331093_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3333230_3334181_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3335310_3335868_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3335843_3336194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3336362_3337157_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3337153_3338203_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3338202_3338892_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3338978_3339476_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3339507_3340824_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3340840_3341815_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3341851_3342310_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3342309_3342990_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3342992_3343421_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3343473_3345204_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3345269_3345842_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3345822_3346509_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3346864_3347536_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3347864_3348086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3348085_3348367_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3348363_3348879_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3348878_3349430_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3349408_3349651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3349655_3350468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3350467_3350731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3350771_3350969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3350949_3351366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3351370_3355327_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3355319_3355709_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3355705_3356239_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3356306_3356666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3356675_3359288_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3359313_3359604_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3359621_3359951_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3359960_3360479_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3360733_3361234_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3361241_3361664_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3361660_3362059_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3362055_3362451_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_162096760.1|3362450_3362639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3362652_3363135_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3363197_3363449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3364123_3365074_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3365502_3366105_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3366227_3366470_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3366475_3367531_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3367559_3368978_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3368980_3370258_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3370244_3370730_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3371369_3372320_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633094.1|3372576_3373266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3373258_3373510_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_010931451.1|3374064_3374676_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3374747_3374954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3375205_3376156_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3376254_3377328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3377495_3378290_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3378329_3378854_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3378846_3380589_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3380798_3381557_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3381559_3382267_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3382283_3383165_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3383175_3383934_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3383902_3384658_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3384727_3386146_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3386167_3386818_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3386951_3387287_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3387375_3388326_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3388402_3390223_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3390227_3391301_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3391423_3392392_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3392465_3393377_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3393395_3393968_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3394048_3394597_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3394596_3396186_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3396255_3396495_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3396535_3397561_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3397626_3398808_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3398904_3399357_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3399366_3400707_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3401023_3402061_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3402442_3402802_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3402885_3403827_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3403901_3404852_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3405145_3406240_+	porin	NA	NA	NA	NA	NA
WP_033446149.1|3406330_3407203_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3407224_3408064_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3408139_3409657_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3409753_3410854_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3410870_3411293_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_003814195.1|3411315_3411528_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3411574_3412495_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3412677_3413427_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3413429_3413759_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_033446148.1|3414046_3415399_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814185.1|3415410_3415794_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3415855_3416656_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3416754_3417705_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
