The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	27282	70036	4109528	transposase,tRNA	Synechococcus_phage(50.0%)	42	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	77634	136108	4109528	transposase,tRNA	Planktothrix_phage(22.22%)	53	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|101866_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132700_132985_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	164892	225403	4109528	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_077086335.1|184325_188000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189529_189976_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193100_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194404_195355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195457_196093_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197377_198478_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198559_198934_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198993_201858_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202812_204024_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205634_206585_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206741_207065_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207169_208210_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208215_208995_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209040_209337_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209362_209638_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210338_211025_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211223_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212056_212782_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214274_215207_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215664_218460_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219053_221897_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222825_223374_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224452_225403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	233335	286923	4109528	transposase,tRNA,protease	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|233335_234286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234372_235323_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235319_236270_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236368_237166_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238115_238526_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239547_240291_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240334_241378_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241548_243651_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245061_246018_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246036_246528_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246524_247880_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247880_248579_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248575_249277_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249529_250579_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250684_251626_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251622_253512_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253598_254237_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254379_255765_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255695_256232_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256383_257775_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257791_258772_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258907_259891_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259955_260855_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260961_262716_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262723_263848_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263861_264842_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265572_266523_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267082_267628_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|267753_269331_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269346_270501_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270514_270640_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270636_272388_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272384_274064_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274126_274675_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275817_276096_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277139_278090_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|278076_278292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278367_278529_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|279195_279645_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279654_280266_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|280424_281273_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281298_282681_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282745_283387_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283526_283985_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284009_284786_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284839_285976_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285972_286923_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	390856	449413	4109528	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390856_391807_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391943_392861_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392857_393106_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393102_394308_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394380_395376_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395398_396619_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396615_397260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398990_399800_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400104_401058_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401156_402140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402066_402768_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402816_403587_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403583_404762_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404929_406636_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406632_407529_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407569_409159_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409208_410201_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410269_410869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411329_412310_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412385_413336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413424_414339_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414335_414995_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415084_416008_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416013_416469_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416465_417569_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417527_417797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|417756_419376_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419372_420431_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420560_421055_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421147_422125_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422320_423526_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423522_425034_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425049_426363_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426553_426733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427142_427877_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_019247421.1|431402_431801_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432211_432682_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432770_433115_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433214_434615_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436403_436922_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437032_437788_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437983_439216_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439208_439994_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440060_441032_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441042_442020_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442145_443318_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443344_444373_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444438_445632_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447413_448364_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|448462_449413_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	589369	650560	4109528	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|589369_590320_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|590795_591686_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|591682_592504_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|592703_593195_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|593213_594287_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|594333_595437_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|595512_596133_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|596153_596663_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|596717_596969_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|597032_598166_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|598173_598560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|598556_601076_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|601504_601843_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|601839_602346_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|602407_603208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|603318_604260_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|604353_605889_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|607568_609419_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|609422_610256_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|610255_611197_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|611448_612420_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|612561_614850_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|615156_616065_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|616119_617085_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_062810229.1|617159_618821_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|618892_619603_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|619569_619734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|619751_620702_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|621400_621784_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|621841_622444_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|622461_622863_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|622978_623890_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|623886_624468_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|625262_625997_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|626037_627087_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|627234_627813_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|628199_629177_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|629270_633665_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|633865_634714_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|634872_635685_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|635740_636691_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|636789_637590_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|637651_638035_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|638046_639399_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|639686_640016_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|640018_640768_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|640950_641871_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|641917_642130_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|642152_642575_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|642591_643692_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|643788_645306_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|645381_646221_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|646242_647115_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|647205_648300_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|648593_649544_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|649618_650560_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	655884	702075	4109528	transposase,tRNA,terminase,tail	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|655884_656910_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|656950_657190_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|657259_658849_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|658848_659397_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|659477_660050_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|660068_660980_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|661053_662022_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|662144_663218_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|663222_665043_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|665119_666070_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|666158_666494_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|666627_667278_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|667299_668718_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|668787_669543_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|669511_670270_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|670280_671162_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|671178_671886_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|671888_672647_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|672856_674599_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|674591_675116_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|675155_675950_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|676117_677191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|677289_678240_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|678491_678698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|678769_679381_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|679935_680187_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|680179_680869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|680886_681108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|681125_682076_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|682715_683201_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|683187_684465_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|684467_685886_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|685914_686970_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|686975_687218_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|687340_687943_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|688371_689322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|689996_690248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|690310_690793_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|690806_690995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|690994_691390_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|691386_691785_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|691781_692204_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|692211_692712_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|692966_693485_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|693494_693824_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|693841_694132_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|694157_696770_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|696779_697139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|697206_697740_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|697736_698126_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|698118_702075_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	708241	762171	4109528	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|708241_709972_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|710024_710453_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|710455_711136_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|711135_711594_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|711630_712605_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|712621_713938_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|713969_714467_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|714553_715243_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|715242_716292_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|716288_717083_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|717251_717602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|717577_718135_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|719264_720215_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|722352_723582_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|723584_725027_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|725131_726277_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|726308_727106_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|727130_728690_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|728686_731059_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|731168_732272_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|732271_732964_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|733107_733809_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|733793_734171_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|734902_735853_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|736012_736885_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|737225_737444_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|737483_738863_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|738904_740302_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|740341_741994_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|741997_742882_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|742881_743823_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|743901_745521_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|745687_746503_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|746570_747140_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|747140_748091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|748745_749843_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|749876_751142_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|751299_752250_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|752493_753084_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|753099_755544_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|755663_756635_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|756766_757291_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|757250_758201_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|758422_760618_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|760690_761098_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|761220_762171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	884760	952736	4109528	transposase	Bacillus_phage(33.33%)	56	NA	NA
WP_023994644.1|884760_885777_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|885973_886957_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|888555_889944_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|889974_890964_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|891074_892307_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|892588_893389_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|893411_895643_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|896430_896877_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|896898_897645_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|897788_898766_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|899399_900011_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|900004_901222_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|901362_902313_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|902309_903029_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|903149_905309_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|905399_905669_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|905757_905964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|905962_906490_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|906508_907288_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|907455_908472_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|908544_909036_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|909046_910762_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|911925_912876_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|912872_914705_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|915103_915763_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|916290_916971_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|917252_917969_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|917983_919285_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|921429_924318_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|924541_925894_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|925922_926444_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|926440_927895_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|927929_928178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|928283_929159_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|929184_930240_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|930252_931044_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|931076_932447_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|933623_934574_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|934626_934848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|935007_935220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|935339_936458_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|936554_936770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|936963_937215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|937327_938278_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|938274_938658_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|938712_940527_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|940676_941504_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|941549_942530_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|942526_942739_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|942735_943917_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|944080_944815_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|944816_947429_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|947564_949478_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|950093_950504_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|950601_951687_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|951785_952736_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	996265	1068782	4109528	transposase,tRNA	Enterococcus_phage(14.29%)	60	NA	NA
WP_005012067.1|996265_997216_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|997320_998370_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|998507_999524_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1001032_1001605_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1001664_1002396_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1002447_1003365_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1004172_1007352_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1007348_1008731_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1008800_1009052_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1009197_1009812_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1009998_1012059_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1012188_1013040_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1013036_1013663_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1013659_1015414_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1015706_1018412_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1018424_1020086_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1020098_1021889_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1022110_1023286_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1023328_1024279_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1024377_1025118_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1025312_1027349_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1027366_1028377_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1028494_1029688_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1029717_1030491_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1030487_1031678_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1031703_1032642_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1032638_1034987_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1035141_1035783_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1037112_1037265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1037296_1037845_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1037863_1038349_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1038526_1039465_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1039467_1039785_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1039830_1040775_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1042455_1043106_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1043159_1043495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1043491_1044352_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1044368_1044650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1044723_1044987_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1045230_1046181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1046479_1047217_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1047652_1047976_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1048010_1048571_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1048691_1049567_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1049579_1050527_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1050628_1050922_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1050948_1053006_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1053020_1053521_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1053594_1055301_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1056164_1057217_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1057269_1057659_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1057667_1058300_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1058399_1059416_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1060246_1061254_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1061250_1062894_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1062890_1063778_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1063918_1064392_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1064381_1065404_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1065400_1066828_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1067765_1068782_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1072535	1134611	4109528	holin,transposase,tRNA	Catovirus(20.0%)	53	NA	NA
WP_010930155.1|1072535_1073672_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1073668_1074742_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1074899_1076336_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1076426_1077068_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1077403_1078420_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1080462_1081413_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1082615_1084037_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084300_1085017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085101_1085419_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085459_1085873_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085874_1086234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086276_1087821_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087904_1088735_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088769_1089924_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089966_1090839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090955_1093244_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094450_1094915_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1094941_1095892_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1095909_1096047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1096259_1097036_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1097080_1097938_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1097959_1098976_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1099110_1100151_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1100345_1102427_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1102662_1104156_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1104386_1105181_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1105401_1106760_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1106756_1107599_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1107617_1109504_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1109445_1109697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1109741_1110374_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1110392_1110995_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1111146_1112097_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1112677_1113385_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1113743_1114730_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1114869_1115883_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1115879_1116830_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1116847_1116988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1116942_1117401_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1117437_1118751_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1118768_1119140_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1119136_1120600_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1120740_1121469_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1121450_1124300_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1124512_1125463_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1125630_1126455_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1126454_1127333_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1128237_1129353_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1129381_1130176_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1130172_1132038_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1132116_1132749_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1132745_1133048_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1133090_1134611_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 12
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1152181	1218700	4109528	transposase,tRNA	Erysipelothrix_phage(33.33%)	54	NA	NA
WP_023853221.1|1152181_1153978_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1153977_1154946_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1155015_1155861_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1155928_1156483_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1156529_1157480_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1157578_1158211_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1158375_1160658_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1160812_1163509_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1163634_1164123_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1166533_1169404_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1169449_1170664_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1170893_1172321_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1172418_1173510_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1173522_1174281_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1174368_1175271_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1175267_1176218_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1176347_1177331_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1177385_1178108_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1179586_1180942_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1181022_1183398_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930213.1|1183562_1185638_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_033446255.1|1185699_1186494_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1186601_1187564_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1187551_1188307_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1188414_1190052_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1190119_1190857_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1190959_1191535_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1191707_1192244_+	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|1192276_1192591_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1192606_1193452_+	membrane protein	NA	NA	NA	NA	NA
WP_003821443.1|1193490_1194870_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1194947_1195829_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1195927_1196878_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1196874_1197285_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1197392_1198247_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1198239_1199202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1199247_1200372_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1200477_1201356_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1201480_1202260_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1202413_1203835_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1204269_1205967_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1206193_1207135_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1207461_1208208_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1208215_1209142_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1209263_1210181_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1210220_1211174_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1211198_1211777_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1213450_1214059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1214136_1214490_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1214573_1215563_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_023852977.1|1215559_1215748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879566.1|1215765_1216716_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|1216802_1217753_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1217749_1218700_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1269628	1326839	4109528	transposase	Klosneuvirus(16.67%)	49	NA	NA
WP_010931070.1|1269628_1270579_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1274325_1274937_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1275159_1276620_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1276716_1278309_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1278662_1278920_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1278921_1280262_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1280357_1281047_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1281059_1282490_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1284214_1285036_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1285046_1286618_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1286646_1287624_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1287650_1288454_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1288450_1289245_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1289252_1290488_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_019247978.1|1290501_1290915_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1291664_1292615_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1293236_1294964_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1295075_1296434_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1296490_1296709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1296726_1297677_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1297717_1298788_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1298810_1299689_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1299860_1300832_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1300994_1301837_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1301998_1302679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931024.1|1302672_1303842_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931023.1|1303838_1304870_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_023853282.1|1304937_1306155_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1306189_1307722_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1307802_1308426_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1308456_1309068_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1309103_1309574_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1310005_1311010_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1311046_1312561_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1312564_1313524_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1313552_1314356_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1314357_1315992_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1316075_1317137_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1317335_1317605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1317608_1318133_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_077086338.1|1318548_1319499_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1319495_1320530_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1320638_1321277_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1321571_1321799_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1321921_1322635_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1322879_1323830_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853496.1|1323969_1324215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1324329_1325778_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1325888_1326839_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1417072	1469225	4109528	transposase,tRNA	Salmonella_phage(25.0%)	45	NA	NA
WP_005013747.1|1417072_1418023_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1418040_1418193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1418189_1418543_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1418555_1418918_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1418959_1419385_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1419587_1420844_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1421042_1422023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1422172_1423414_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1423512_1424463_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1424471_1425167_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1427988_1428588_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1428598_1430764_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1430787_1432572_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1432571_1432661_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1433355_1433628_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1433627_1435694_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1435690_1436641_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1436739_1437690_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1437805_1438138_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1438134_1438821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1438807_1439767_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010930947.1|1439799_1442169_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1442168_1442801_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1442902_1444243_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1444289_1445645_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_005014990.1|1445935_1446172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1446359_1446677_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1446949_1447465_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814021.1|1447735_1448491_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1448829_1449036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1449043_1449703_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1449997_1452202_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1452312_1453536_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1453658_1454633_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1454700_1455894_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1455908_1456709_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1456705_1458562_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1458558_1459164_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1459182_1460568_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1461293_1462520_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1462608_1463391_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1463489_1464440_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1464466_1465240_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1465251_1466493_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|1468274_1469225_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1513150	1644314	4109528	transposase,tRNA	Lactobacillus_phage(11.11%)	104	NA	NA
WP_010930416.1|1513150_1513639_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1513756_1514335_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1514440_1514809_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1514907_1515858_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1515864_1516977_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1517663_1518866_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1519069_1521730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1521742_1525147_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1525814_1528040_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1528086_1528413_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1528463_1529072_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1529170_1530121_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852714.1|1530219_1531170_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1531239_1532004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1532000_1532537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1532703_1533555_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1533614_1534241_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1534237_1535188_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1535286_1536399_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1536388_1537390_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1537495_1539007_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1539003_1540308_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1540419_1540980_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1541247_1541802_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1542257_1542473_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1542727_1545325_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1545321_1546509_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1547167_1547782_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1547870_1548992_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1549009_1549915_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1550807_1551758_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1551939_1552692_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1552760_1553420_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1553416_1554145_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1554157_1556437_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1556461_1556665_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1556706_1557339_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1557474_1558392_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1558388_1559102_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1559339_1560110_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1560114_1560714_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1560958_1562449_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1562507_1562792_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1563357_1564284_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1564420_1565161_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1565327_1566704_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1566885_1567791_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1569442_1571245_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1571362_1572013_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1572111_1573062_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1573160_1574111_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1574132_1575353_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1575538_1576951_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1577014_1578082_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1578081_1579569_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1579578_1580523_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1580682_1581381_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1581458_1582364_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1582383_1583334_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248220.1|1583432_1584227_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_010930454.1|1584231_1585902_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_010930455.1|1586025_1587075_-	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811187.1|1587396_1588173_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930456.1|1588237_1589140_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930457.1|1590433_1591237_+	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930458.1|1593930_1594317_+	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_033446218.1|1594332_1596423_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_003811203.1|1596474_1597428_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_010930460.1|1597442_1598330_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930461.1|1598467_1599994_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003811209.1|1600092_1600593_+	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_019247170.1|1600916_1602872_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930464.1|1603039_1605124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930465.1|1605150_1605936_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930466.1|1606791_1607562_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014486073.1|1607561_1608302_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930468.1|1608343_1609513_+	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_010930469.1|1609544_1611629_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_003811224.1|1611625_1612516_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930470.1|1612512_1613610_+	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_010930471.1|1613632_1614922_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|1614933_1615959_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930473.1|1615955_1618013_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_023852812.1|1618026_1619202_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_005013747.1|1619283_1620234_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1620292_1621066_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1621058_1622615_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1622611_1623562_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1624888_1625491_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1625730_1626432_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1626425_1627208_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1627392_1628343_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1628441_1629179_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1629368_1630127_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1630173_1631163_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1631340_1632309_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1633848_1634817_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1634825_1635767_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1636240_1637251_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1637241_1638756_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1638752_1640099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1640101_1641136_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1641185_1642811_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1643363_1644314_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1665105	1726453	4109528	transposase,tRNA	uncultured_Caudovirales_phage(12.5%)	52	NA	NA
WP_005013747.1|1665105_1666056_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1666349_1667072_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1667510_1668698_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1668701_1669052_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1670801_1671773_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1671786_1672500_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1672504_1673422_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1673528_1673825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1673923_1674874_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930509.1|1676032_1678966_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_003810969.1|1678965_1679310_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_004568496.1|1679306_1680935_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_010930510.1|1680931_1681411_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_033446177.1|1681410_1681692_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930511.1|1681688_1682015_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_005013747.1|1682170_1683121_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247780.1|1683164_1683707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930513.1|1683804_1684653_+	hydrolase	NA	NA	NA	NA	NA
WP_010930514.1|1684702_1685152_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.2	2.0e-06
WP_010930515.1|1685148_1686150_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_010930516.1|1686162_1686957_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930517.1|1687005_1688907_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003810992.1|1688903_1689527_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_003816541.1|1689653_1690778_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930518.1|1691158_1692763_+	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_010930519.1|1692918_1693695_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930520.1|1693779_1694778_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930521.1|1694774_1695548_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014905945.1|1696532_1697483_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810867.1|1697506_1697971_-	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_010930799.1|1698117_1699326_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_010930798.1|1699369_1699807_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930797.1|1699925_1701215_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1703955_1704906_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930595.1|1705004_1706021_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_010930596.1|1706199_1707234_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_003811733.1|1707230_1707857_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930597.1|1707853_1708906_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_010930598.1|1708955_1709726_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930599.1|1709776_1710613_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930600.1|1710808_1711549_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930601.1|1711623_1712367_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811719.1|1713028_1713802_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_003811716.1|1714939_1716229_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_010930602.1|1717839_1719087_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930603.1|1719096_1720806_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_003811709.1|1720802_1721741_-	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_003811706.1|1721737_1723021_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010930604.1|1723024_1723507_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930605.1|1723507_1724494_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003811701.1|1724666_1725386_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|1725502_1726453_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1832641	1891911	4109528	transposase,tRNA,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1832641_1833592_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1833716_1834526_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|1834726_1835677_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1836950_1838168_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1839224_1840127_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1840203_1841076_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1841206_1841575_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1841632_1842679_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1842874_1844131_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1844135_1845473_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1845622_1846579_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1846681_1847614_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1847729_1848050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1848042_1848402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1848449_1850024_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1850076_1851021_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1851038_1851869_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1851861_1853496_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1853492_1854848_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1855754_1857332_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1857335_1858610_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1858707_1859082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1860797_1861931_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1861968_1862574_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1862570_1863389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1863460_1866085_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1866071_1866326_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1866392_1866974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1867277_1867538_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1867703_1868327_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_065521066.1|1868326_1869100_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1869096_1870305_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1870330_1870804_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1870877_1871828_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1871926_1872877_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1872975_1874325_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1875090_1875846_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1875938_1878821_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1879143_1879569_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1879596_1880745_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1880741_1881248_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|1881263_1882550_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|1882599_1883895_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1883896_1884535_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|1884540_1885698_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1885724_1887080_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1887083_1888154_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1888292_1888529_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1888616_1889723_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1889688_1890993_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1891011_1891911_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 18
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1902151	1946474	4109528	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|1902151_1903102_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1903200_1904151_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1904350_1905436_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1905451_1906213_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1906209_1907133_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1907231_1907756_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1907764_1908508_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1908603_1908843_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1908856_1909009_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1909094_1910585_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1910676_1911615_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1911611_1911788_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1911790_1912453_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1914074_1914218_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1914214_1915189_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|1915083_1915338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1915355_1916306_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1916302_1917577_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1917680_1918874_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1918870_1919524_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1919520_1920957_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1920944_1921304_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1922118_1922259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1922276_1923227_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1924272_1926138_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1926395_1927916_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1928003_1928654_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|1929602_1930898_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1930919_1931804_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1931902_1932778_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1932767_1933124_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|1933254_1934229_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1934358_1934538_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1934635_1935160_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1935170_1936007_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1936119_1936491_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1936487_1937039_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1937054_1938746_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1938794_1939475_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1939722_1940187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1940356_1941286_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1941298_1941946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1942019_1943837_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1943920_1944871_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1945523_1946474_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	1976247	2040616	4109528	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|1976247_1977198_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1977419_1978370_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|1978468_1979434_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|1979571_1980471_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|1983065_1984553_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|1984563_1985760_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|1985832_1987152_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|1987148_1988024_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|1988054_1989203_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|1989220_1989535_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_062810228.1|1989556_1990279_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|1990278_1991097_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|1991101_1991629_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|1991634_1992891_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|1993249_1994389_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|1994466_1995339_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|1996209_1997160_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|1997119_1997755_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|1998114_1999437_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|1999755_2000577_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2002001_2002574_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2002613_2004443_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2004405_2005464_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2005501_2005963_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2006047_2006794_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2008284_2011515_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2011581_2012913_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2013165_2013540_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2013642_2014821_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2014831_2015422_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2015532_2016339_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2016364_2017159_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2018159_2019134_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2019292_2019805_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2019961_2020933_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2022677_2023484_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010930716.1|2023480_2024782_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930715.1|2024732_2025497_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2025610_2026381_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2026465_2027653_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2027725_2028100_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003810308.1|2028200_2029463_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2029459_2030317_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2030489_2031491_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2031942_2032893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446265.1|2034456_2035608_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2035976_2036213_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2036276_2036444_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_023853105.1|2036557_2038453_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_062826579.1|2038616_2039567_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2039665_2040616_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2172145	2221798	4109528	transposase,tRNA	Synechococcus_phage(15.38%)	43	NA	NA
WP_005012067.1|2172145_2173096_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2173194_2175189_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2175248_2176214_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2176203_2179065_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2179067_2179574_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2179678_2180887_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2180888_2181827_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2181988_2182462_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2182458_2183409_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2183519_2183960_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2184088_2185318_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2185356_2186178_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2186231_2187383_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2187474_2187963_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2190513_2193063_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2193133_2195707_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2195972_2196173_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2196204_2196366_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2196423_2196762_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2196910_2197861_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2198635_2199304_+	arylesterase	NA	NA	NA	NA	NA
WP_010930531.1|2199285_2201241_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_004568486.1|2201483_2202233_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2202245_2203109_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2203112_2204528_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2204661_2205390_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2205528_2205729_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2205904_2206303_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2206326_2207727_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2207845_2208598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816527.1|2208886_2209564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2209590_2210370_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2210366_2211251_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2211268_2212048_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2212032_2212791_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_023852762.1|2212928_2213564_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2213831_2214848_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2214945_2215986_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2216120_2217413_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2218772_2219156_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2219173_2219761_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_005012067.1|2219798_2220749_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2220847_2221798_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2478105	2536349	4109528	transposase,tRNA	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2478105_2479056_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2479535_2480192_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2480206_2481874_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2481876_2482506_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2482717_2483812_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2483956_2484769_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_010930383.1|2484772_2486356_-	membrane protein	NA	NA	NA	NA	NA
WP_010930382.1|2486526_2487657_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2487843_2488920_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2489001_2489652_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2489666_2491070_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2491353_2492172_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2492168_2492873_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2493772_2494888_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2494921_2495296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2495318_2496476_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2496488_2496722_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2497356_2500326_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2500340_2500550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2500701_2501331_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023994978.1|2501327_2503385_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2503441_2504122_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2504118_2504679_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2504685_2505783_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2505935_2506529_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2506525_2507818_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2507831_2508374_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2508383_2509220_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2509253_2510315_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2510356_2511409_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2511424_2511727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2511868_2512819_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2512836_2513001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2512997_2514692_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2514688_2515774_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2515821_2516721_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2516731_2517376_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2518397_2521640_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2521650_2522805_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2523031_2523994_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2524092_2525043_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2525141_2526092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2526101_2526791_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2526850_2527288_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2527333_2528227_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2528274_2529447_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2529443_2530598_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2530794_2531145_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2531134_2531569_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2531585_2532536_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2532683_2533151_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2533131_2534289_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2534354_2535281_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2535398_2536349_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2578627	2645127	4109528	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2578627_2579578_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2579947_2580520_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2580522_2581533_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2581525_2582026_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2582036_2582378_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930334.1|2582446_2583181_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2583197_2583467_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2583489_2584278_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2584324_2585341_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2585557_2587000_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2587178_2588798_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2588918_2590739_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2590817_2592350_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2592383_2594030_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2594099_2595122_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2595139_2596273_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2596275_2596965_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2596964_2597750_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2597793_2598558_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2598596_2600018_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2600083_2600788_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2600835_2601255_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2601267_2601675_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2601858_2602569_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2602695_2602986_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2603003_2603486_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2607991_2609146_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2609451_2610468_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2610714_2611503_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2611569_2612250_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2612246_2613017_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2613115_2614066_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2614121_2615039_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2615049_2616228_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2616247_2617243_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2618831_2619440_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2619427_2620468_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2620485_2621448_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2621444_2622638_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2622634_2623432_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2623457_2624444_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2624462_2626502_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2626703_2627384_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2627397_2628309_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2628305_2628884_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2629022_2629928_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2629935_2633355_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2633342_2635943_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2636898_2637531_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2637924_2638683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2638679_2639882_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2640069_2641020_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2641927_2643073_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2643059_2643815_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2643931_2644111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2644176_2645127_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2673242	2711703	4109528	transposase	Planktothrix_phage(33.33%)	40	NA	NA
WP_005012067.1|2673242_2674193_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2674291_2675242_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2675340_2676291_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811316.1|2676383_2676923_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_023852799.1|2677029_2677374_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_010930298.1|2677431_2678880_-	CoA transferase	NA	NA	NA	NA	NA
WP_003811313.1|2679067_2679403_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930297.1|2681030_2682209_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|2682291_2682792_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930296.1|2682901_2683603_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_010930295.1|2683614_2684079_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_023852802.1|2684093_2684369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811306.1|2684365_2685142_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_010930294.1|2685170_2685998_+	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_010930293.1|2686123_2686594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811301.1|2686720_2687614_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930292.1|2687661_2688843_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811298.1|2688855_2689671_-	exported protein	NA	NA	NA	NA	NA
WP_010930291.1|2689804_2690332_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811295.1|2690328_2690826_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_003811293.1|2690973_2691351_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_010929584.1|2691572_2692523_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811244.1|2692621_2693233_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930290.1|2693467_2694595_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930289.1|2694705_2695794_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_003811259.1|2695846_2696698_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_003811262.1|2696717_2697599_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_010930288.1|2697775_2699089_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811267.1|2699299_2700133_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930287.1|2700129_2700711_+	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_005015810.1|2701064_2702015_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930286.1|2702030_2703146_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811272.1|2703248_2704175_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930285.1|2704174_2705413_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811277.1|2705409_2706177_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930284.1|2706177_2706879_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_019247793.1|2706960_2707407_-	glutamate racemase	NA	NA	NA	NA	NA
WP_010930283.1|2708296_2708935_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_005012808.1|2709703_2710654_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|2710752_2711703_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2810830	2865347	4109528	transposase	Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)	48	NA	NA
WP_023853639.1|2810830_2811781_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2812109_2812715_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2812768_2814082_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2814156_2814627_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2814626_2815415_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2815425_2817078_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2817165_2818116_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2819277_2819784_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2819780_2820545_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2820560_2820845_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2820909_2821899_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2822070_2823000_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2822971_2823658_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2823691_2824237_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2824281_2825547_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2825543_2826446_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2827627_2828572_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2828666_2830184_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2830225_2831854_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2831961_2832843_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2835955_2836330_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2836354_2836693_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2836736_2838371_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2838409_2839756_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2839863_2841285_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2841354_2841939_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2842041_2842992_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2843126_2844233_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2844243_2845341_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2845485_2846691_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2846697_2847219_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2847215_2847698_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2847703_2847955_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2847935_2848421_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2848556_2852018_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2852035_2852920_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2852929_2853361_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2853607_2854111_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2854188_2855589_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2855663_2856539_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2856535_2857543_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2858010_2858316_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2858406_2858997_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2859187_2860204_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2860395_2862732_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2862814_2863249_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_023995489.1|2863347_2864298_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2864396_2865347_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2873372	2930158	4109528	transposase,protease	uncultured_Mediterranean_phage(28.57%)	41	NA	NA
WP_005012067.1|2873372_2874323_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2876029_2876296_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2877003_2877342_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2881895_2882498_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2882594_2883884_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2883941_2884673_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2884669_2885473_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2885469_2886558_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2886554_2887484_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2887632_2888778_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2888799_2889750_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2889767_2889926_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2890080_2893902_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2894058_2894727_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2894731_2896405_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2896423_2897743_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2897747_2900063_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2900118_2902287_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2902283_2907464_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2907562_2907877_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2908104_2908350_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2908444_2908963_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2909062_2910268_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2910383_2911781_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2911897_2912476_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2912548_2913940_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2914107_2915058_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2915338_2915959_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2915955_2916369_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2916365_2917409_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2917464_2917653_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2917662_2918427_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2918517_2919174_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2919265_2920024_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2920049_2921651_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2921851_2922856_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2922956_2923220_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2923337_2924114_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2924704_2925655_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2928038_2929151_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2929207_2930158_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	2960544	3004235	4109528	transposase	Planktothrix_phage(33.33%)	41	NA	NA
WP_005012067.1|2960544_2961495_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2961512_2961662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2961615_2962512_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2964789_2967015_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2967179_2968268_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2968224_2968878_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2968925_2969723_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2970254_2971205_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2971285_2972434_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2972490_2973441_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2973539_2973845_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2973873_2974308_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2974309_2975554_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2975550_2976261_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2976275_2977187_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2977549_2977954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2977950_2978409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2978415_2979324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2979320_2980187_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2980173_2981001_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2981011_2982139_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2983216_2984455_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2984496_2985759_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2985765_2986518_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2986569_2986755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2987030_2987495_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2987526_2988186_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2988330_2990439_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2990435_2991386_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2991489_2992110_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2992213_2992954_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2994088_2995213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2995258_2995627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2995868_2996819_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2997854_2998397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2998594_2998765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2998782_2999733_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2999729_3000638_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|3000764_3001601_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|3002113_3003223_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|3003284_3004235_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	3384179	3437920	4109528	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3384179_3385130_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3385534_3386179_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3386203_3386788_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3386888_3387506_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3387508_3389224_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3389220_3389529_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3389545_3390163_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3390207_3390510_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3390610_3391465_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3391652_3391877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3392046_3392319_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3392736_3393144_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3393513_3394308_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3394408_3395644_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3395712_3396729_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3396740_3398117_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3398113_3399310_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3399306_3400845_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3400841_3402101_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3404041_3404992_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3405758_3406853_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3406845_3408180_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3408133_3408817_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024000003.1|3408842_3410006_-	acyl-CoA dehydrogenase C-terminal domain protein	NA	NA	NA	NA	NA
WP_004566224.1|3410002_3411004_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3411003_3411876_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3411872_3412622_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3412618_3413410_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3413406_3414546_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3414821_3415607_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3415640_3416423_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3416426_3416816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3417955_3418819_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3418854_3419943_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3419939_3420890_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3421243_3424222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3425148_3426027_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3427975_3428926_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3428922_3429390_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3429432_3430203_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3430223_3431024_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3431034_3432444_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3432538_3433324_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3433563_3434580_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3434687_3435080_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3435217_3435898_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3435902_3436874_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3436969_3437920_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	3444075	3503373	4109528	transposase,tRNA	Acinetobacter_phage(27.27%)	47	NA	NA
WP_003820957.1|3444075_3445839_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3445950_3446829_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3446941_3447757_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3447760_3448012_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3448096_3449113_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3449443_3449665_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3452025_3452943_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3453440_3454649_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3454728_3456300_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3456417_3457353_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3457541_3458486_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3459053_3464771_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3464776_3465904_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3465959_3466586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3466857_3467874_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3467969_3468680_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3468676_3469666_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3469761_3471393_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3471395_3472133_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3472288_3473161_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3473510_3474650_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3474646_3475306_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3475377_3476010_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3476039_3476558_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3476568_3477678_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3477724_3478579_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3478580_3479483_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3480705_3481656_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3483410_3484400_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3484575_3485364_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3485360_3486392_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3486410_3486974_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3487029_3488550_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3488813_3489518_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3489525_3490254_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3490368_3490743_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3490785_3492075_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3492071_3493241_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3493237_3494077_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3494136_3495072_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3495084_3496035_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3496133_3497096_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3497127_3497487_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3497611_3498514_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3498515_3500288_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3500322_3501099_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3502422_3503373_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	3518311	3576384	4109528	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3518311_3519262_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3519390_3520524_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3520567_3521473_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3521475_3523176_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3523172_3524093_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3524100_3525078_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3525136_3526171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3528145_3528382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023995266.1|3528508_3529372_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3529460_3530282_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3530361_3531099_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3531095_3532088_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3532240_3532864_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3532908_3534057_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3536380_3537331_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3537671_3538622_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3538720_3539671_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3539967_3540465_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3540507_3542283_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3542290_3543157_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3543163_3543898_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3545067_3545862_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3546151_3546742_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3546775_3548104_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3548178_3549324_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3549435_3550434_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3550396_3550831_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3552347_3553232_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3553228_3554434_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3554430_3555291_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3555403_3557194_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3557234_3557879_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3557900_3558209_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3558374_3559661_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3561094_3562045_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3563996_3565211_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3565316_3566306_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3566302_3566911_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3566923_3567553_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3567549_3568170_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3568201_3568993_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3569844_3570300_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3570318_3571245_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3571298_3572585_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3573515_3574388_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3574384_3575335_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3575433_3576384_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 32
NZ_CP011186	Bordetella pertussis strain H665 chromosome, complete genome	4109528	4008596	4073508	4109528	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|4008596_4009082_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4009170_4009308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4009300_4010281_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4010547_4011357_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4011396_4012077_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4012070_4012529_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4012540_4012903_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4012985_4013669_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4013724_4014033_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4014051_4014366_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4014362_4016837_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4016844_4018236_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4018232_4018418_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4018396_4019098_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4019094_4019916_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4019896_4021021_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4021013_4022033_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_010931656.1|4022238_4023129_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4023373_4024165_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4024247_4024622_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4024599_4026009_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4026001_4027384_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4027718_4029323_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931659.1|4029400_4030372_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4030382_4031309_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4031699_4032650_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4032819_4034046_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4034245_4035112_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4035104_4036067_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4036167_4037118_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4037216_4038167_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4038265_4039216_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4039212_4040706_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4040702_4043810_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4043806_4046875_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4046871_4048122_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4048302_4049055_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4049096_4049741_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_010931668.1|4049749_4050730_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4050829_4051573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4051655_4052003_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4052100_4052943_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4052987_4053875_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4053901_4054090_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4054187_4055645_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4055631_4057158_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4057176_4057644_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4057643_4058666_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4058786_4059527_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4059581_4060682_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4060683_4061874_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4061993_4063010_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4063328_4064000_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4063996_4064905_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4065116_4065764_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4069624_4070692_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4070702_4071512_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023999981.1|4071601_4072375_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4072375_4072540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4072557_4073508_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
