The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019418	Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 chromosome, complete genome	4640929	977888	985201	4640929	protease	Dickeya_phage(16.67%)	7	NA	NA
WP_001201751.1|977888_979007_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125873.1|979003_980950_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
WP_000447499.1|981079_981301_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520787.1|981624_981945_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	3.5e-13
WP_000934064.1|981975_984252_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_001117984.1|984464_984662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001531374.1|984823_985201_-	hypothetical protein	NA	A0A077KET4	Ralstonia_phage	40.2	1.7e-19
>prophage 2
NZ_CP019418	Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 chromosome, complete genome	4640929	1988783	1996053	4640929		Morganella_phage(33.33%)	8	NA	NA
WP_001157315.1|1988783_1990214_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
WP_001748531.1|1990287_1990983_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
WP_000107434.1|1991062_1991374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017465542.1|1992025_1993237_+	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	56.2	4.4e-109
WP_024131109.1|1993496_1993685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208509.1|1993695_1993908_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
WP_000457663.1|1994362_1995631_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	91.9	9.3e-227
WP_000394197.1|1995633_1996053_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
>prophage 3
NZ_CP019418	Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 chromosome, complete genome	4640929	2087406	2097913	4640929		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126351.1|2087406_2088720_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	9.1e-52
WP_000565902.1|2088746_2089826_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.3e-16
WP_000648783.1|2089830_2090604_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_020437413.1|2090619_2091594_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973714.1|2091599_2092151_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.0e-52
WP_000857530.1|2092151_2093030_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.8	5.1e-107
WP_001023659.1|2093077_2093977_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000697840.1|2093976_2095062_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
WP_000981469.1|2095438_2096332_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_020437414.1|2096509_2097913_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	27.1	2.3e-21
>prophage 4
NZ_CP019418	Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 chromosome, complete genome	4640929	2176366	2185537	4640929	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195330.1|2176366_2178400_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703137.1|2178640_2179099_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_023259641.1|2179270_2179801_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|2179857_2180325_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|2180371_2181091_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272850.1|2181087_2182773_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_001240417.1|2182995_2183727_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2183786_2183894_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|2183874_2184606_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2184589_2185537_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
>prophage 5
NZ_CP019418	Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 chromosome, complete genome	4640929	2715691	2724625	4640929	integrase	Enterobacteria_phage(85.71%)	11	2713062:2713077	2719842:2719857
2713062:2713077	attL	GCAGCAGGTGAAAGCG	NA	NA	NA	NA
WP_023196286.1|2715691_2716885_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B5FPC6	Escherichia_phage	50.4	8.2e-108
WP_021000667.1|2716915_2717353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023196287.1|2717520_2718414_-	DUF4747 family protein	NA	NA	NA	NA	NA
WP_023259734.1|2718821_2719388_-	bacteriophage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	62.2	6.5e-55
WP_000984211.1|2719404_2719650_-	ogr/Delta-like zinc finger family protein	NA	Q7M294	Enterobacteria_phage	76.5	6.3e-31
WP_021000671.1|2719646_2720384_-	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	64.4	4.4e-80
2719842:2719857	attR	CGCTTTCACCTGCTGC	NA	NA	NA	NA
WP_001604627.1|2720921_2721188_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	70.5	1.7e-29
WP_023259733.1|2721184_2721736_+	ash family protein	NA	Q7M2A7	Enterobacteria_phage	71.3	8.6e-36
WP_001604623.1|2721732_2721960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023259732.1|2721956_2722277_+	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_021000674.1|2722291_2724625_+	toprim domain-containing protein	NA	Q7M2A8	Enterobacteria_phage	84.5	0.0e+00
>prophage 6
NZ_CP019418	Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 chromosome, complete genome	4640929	4216869	4261643	4640929	tail,tRNA,holin,plate	Burkholderia_phage(36.36%)	47	NA	NA
WP_001177097.1|4216869_4217385_-|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	41.2	3.4e-34
WP_000368203.1|4217394_4218876_-|tail	tail fiber protein	tail	A0A0M3ULF6	Salmonella_phage	51.7	1.3e-51
WP_000359500.1|4218878_4219511_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	6.6e-24
WP_020437568.1|4219503_4220619_-|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	51.7	3.4e-100
WP_001093501.1|4220609_4220969_-	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_000632048.1|4221132_4222680_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	2.5e-48
WP_020437570.1|4222679_4223609_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	83.8	3.9e-150
WP_000593184.1|4223605_4223968_-	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
WP_017465888.1|4224295_4225018_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_017465889.1|4225027_4226071_-	phage late control D family protein	NA	A4JWL3	Burkholderia_virus	45.9	6.5e-77
WP_001269716.1|4226058_4226268_-|tail	tail protein X	tail	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_020437572.1|4226267_4227221_-|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	51.5	1.0e-36
WP_020437573.1|4227220_4229572_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	31.3	3.6e-67
WP_001185655.1|4229668_4229797_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_020437574.1|4229756_4230074_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_020437575.1|4230125_4230650_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	3.6e-68
WP_000729853.1|4230649_4232077_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.4e-194
WP_000875314.1|4232066_4232264_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449439.1|4232260_4232716_-	Gp37 family protein	NA	NA	NA	NA	NA
WP_000777267.1|4232874_4233189_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	48.2	8.3e-20
WP_020437576.1|4233201_4233807_-	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	1.4e-60
WP_001226439.1|4233809_4234097_-|holin	putative holin	holin	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
WP_000615248.1|4234673_4235021_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
WP_000136394.1|4235151_4236501_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_000790028.1|4236845_4238495_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_001541297.1|4238938_4239181_+	outer membrane protein	NA	NA	NA	NA	NA
WP_165418218.1|4239214_4239883_+	YjbF family lipoprotein	NA	NA	NA	NA	NA
WP_000977979.1|4239879_4240617_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA	NA
WP_000750804.1|4240616_4242713_+	YjbH domain-containing protein	NA	NA	NA	NA	NA
WP_000982749.1|4242855_4243266_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_001252085.1|4243431_4244322_-	maltose ABC transporter permease MalG	NA	NA	NA	NA	NA
WP_000382573.1|4244336_4245881_-	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
WP_000695415.1|4246012_4247203_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
WP_000179176.1|4247564_4248674_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
WP_000973642.1|4248762_4250121_+	maltoporin	NA	NA	NA	NA	NA
WP_000782497.1|4250284_4251202_+	maltose operon protein MalM	NA	NA	NA	NA	NA
WP_000019230.1|4251382_4251880_+	chorismate lyase	NA	NA	NA	NA	NA
WP_000455249.1|4251893_4252766_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_000017360.1|4252864_4255285_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_000002900.1|4255455_4255824_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_000646079.1|4255932_4256541_+	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
WP_001128117.1|4256719_4258045_+	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_001575282.1|4258041_4258155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001030592.1|4258176_4258386_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000416271.1|4258484_4259000_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001039335.1|4259246_4260557_+	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_020437579.1|4260644_4261643_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
