assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001975515.1_ASM197551v1	NZ_CP019414	Salmonella enterica subsp. enterica serovar Manchester str. ST278 chromosome, complete genome	1	2830682-2831016	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,DinG,cas3,csa3,WYL,PD-DExK,RT	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACACT,CGGTTTATCCCCGCTGNCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	30,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Unclear	DEDDh,DinG,cas3,csa3,WYL,PD-DExK,RT	NA,NA	NA|254aa|up_9|NZ_CP019414.1_2822548_2823310_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP019414.1_2823290_2824340_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP019414.1_2824336_2824816_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP019414.1_2824815_2825526_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP019414.1_2825544_2825856_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP019414.1_2826046_2826370_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP019414.1_2826420_2827026_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NZ_CP019414.1_2827012_2828452_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP019414.1_2828461_2829370_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NZ_CP019414.1_2829620_2830667_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|318aa|down_0|NZ_CP019414.1_2832932_2833886_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_1|NZ_CP019414.1_2833973_2834708_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_2|NZ_CP019414.1_2834809_2836522_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_3|NZ_CP019414.1_2836521_2838321_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|down_4|NZ_CP019414.1_2838756_2839119_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|down_5|NZ_CP019414.1_2839208_2840006_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_6|NZ_CP019414.1_2840611_2841283_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_7|NZ_CP019414.1_2841418_2842717_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_8|NZ_CP019414.1_2842799_2844437_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_9|NZ_CP019414.1_2844664_2845465_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed
GCF_001975515.1_ASM197551v1	NZ_CP019414	Salmonella enterica subsp. enterica serovar Manchester str. ST278 chromosome, complete genome	2	2840104-2840316	2,2,2	CRT,CRISPRCasFinder,PILER-CR	no	cas3	DEDDh,DinG,cas3,csa3,WYL,PD-DExK,RT	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACAC,TATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACACC	29,24,30	0	0	NA	NA	I-E:I-E:I-E	3,3,2	3	Unclear	DEDDh,DinG,cas3,csa3,WYL,PD-DExK,RT	NA,NA	NA|480aa|up_9|NZ_CP019414.1_2827012_2828452_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_8|NZ_CP019414.1_2828461_2829370_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_7|NZ_CP019414.1_2829620_2830667_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas3|511aa|up_6|NZ_CP019414.1_2831016_2832549_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|up_5|NZ_CP019414.1_2832932_2833886_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_4|NZ_CP019414.1_2833973_2834708_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NZ_CP019414.1_2834809_2836522_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_CP019414.1_2836521_2838321_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NZ_CP019414.1_2838756_2839119_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|up_0|NZ_CP019414.1_2839208_2840006_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_0|NZ_CP019414.1_2840611_2841283_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|NZ_CP019414.1_2841418_2842717_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|NZ_CP019414.1_2842799_2844437_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_3|NZ_CP019414.1_2844664_2845465_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|119aa|down_4|NZ_CP019414.1_2846497_2846854_-	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|745aa|down_5|NZ_CP019414.1_2846938_2849173_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|432aa|down_6|NZ_CP019414.1_2849224_2850520_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_7|NZ_CP019414.1_2850577_2853334_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|381aa|down_8|NZ_CP019414.1_2853377_2854520_-	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]	NA|447aa|down_9|NZ_CP019414.1_2854597_2855938_-	TIGR03247, glucar-dehydr, glucarate dehydratase
