assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001971605.1_ASM197160v1	NZ_CP013916	Sphingomonas sp. LK11 chromosome, complete genome	1	962471-962570	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,WYL	Orphan	ACCCCTCCCCTGAAGGGGAGGGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,WYL	NA|132aa|up_0|NZ_CP013916.1_962071_962467_+,NA	NA|276aa|up_9|NZ_CP013916.1_952537_953365_+	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional	NA|514aa|up_8|NZ_CP013916.1_953770_955312_-	cd13607, PBP2_AfProX_like, Substrate-binding protein ProX of ABC-type osmoregulatory transporter from Archaeoglobus fulgidus and its related proteins; the type 2 periplasmic-binding protein fold	NA|252aa|up_7|NZ_CP013916.1_955308_956064_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|325aa|up_6|NZ_CP013916.1_956223_957198_+	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed	NA|240aa|up_5|NZ_CP013916.1_957332_958052_+	pfam02517, Abi, CAAX protease self-immunity	NA|254aa|up_4|NZ_CP013916.1_958179_958941_-	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|311aa|up_3|NZ_CP013916.1_958937_959870_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|236aa|up_2|NZ_CP013916.1_959903_960611_-	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|449aa|up_1|NZ_CP013916.1_960610_961957_-	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	NA|132aa|up_0|NZ_CP013916.1_962071_962467_+	NA	NA|296aa|down_0|NZ_CP013916.1_962599_963487_-	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|221aa|down_1|NZ_CP013916.1_963520_964183_-	pfam06904, Extensin-like_C, Extensin-like protein C-terminus	NA|74aa|down_2|NZ_CP013916.1_964225_964447_-	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|169aa|down_3|NZ_CP013916.1_964446_964953_-	pfam11188, DUF2975, Protein of unknown function (DUF2975)	NA|385aa|down_4|NZ_CP013916.1_965266_966421_+	PRK03080, PRK03080, phosphoserine transaminase	NA|526aa|down_5|NZ_CP013916.1_966571_968149_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|114aa|down_6|NZ_CP013916.1_968632_968974_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|369aa|down_7|NZ_CP013916.1_968970_970077_+	pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase	NA|430aa|down_8|NZ_CP013916.1_970189_971479_+	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|139aa|down_9|NZ_CP013916.1_971602_972019_-	pfam15782, GREB1, Gene regulated by oestrogen in breast cancer
GCF_001971605.1_ASM197160v1	NZ_CP013916	Sphingomonas sp. LK11 chromosome, complete genome	2	3694358-3694479	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,WYL	Orphan	CCGGCCAAGCCCAAGCGTGTCCGCAAGAAGGC	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,WYL	NA|149aa|up_6|NZ_CP013916.1_3683563_3684010_-,NA|103aa|up_1|NZ_CP013916.1_3689873_3690182_+,NA	NA|156aa|up_9|NZ_CP013916.1_3680884_3681352_-	pfam00186, DHFR_1, Dihydrofolate reductase	NA|128aa|up_8|NZ_CP013916.1_3682247_3682631_+	cd08071, MPN_DUF2466, Mov34/MPN/PAD-1 family	NA|247aa|up_7|NZ_CP013916.1_3682826_3683567_-	pfam09694, Gcw_chp, Bacterial protein of unknown function (Gcw_chp)	NA|149aa|up_6|NZ_CP013916.1_3683563_3684010_-	NA	NA|257aa|up_5|NZ_CP013916.1_3684284_3685055_-	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]	NA|376aa|up_4|NZ_CP013916.1_3685056_3686184_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|807aa|up_3|NZ_CP013916.1_3686250_3688671_-	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|318aa|up_2|NZ_CP013916.1_3688809_3689763_-	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only]	NA|103aa|up_1|NZ_CP013916.1_3689873_3690182_+	NA	NA|412aa|up_0|NZ_CP013916.1_3690252_3691488_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|152aa|down_0|NZ_CP013916.1_3694836_3695292_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|405aa|down_1|NZ_CP013916.1_3695406_3696621_+	PRK07503, PRK07503, methionine gamma-lyase; Provisional	NA|614aa|down_2|NZ_CP013916.1_3697157_3698999_-	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|977aa|down_3|NZ_CP013916.1_3699258_3702189_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|240aa|down_4|NZ_CP013916.1_3702398_3703118_+	pfam05118, Asp_Arg_Hydrox, Aspartyl/Asparaginyl beta-hydroxylase	NA|599aa|down_5|NZ_CP013916.1_3703230_3705027_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|190aa|down_6|NZ_CP013916.1_3705131_3705701_+	smart00932, Nfu_N, Scaffold protein Nfu/NifU N terminal	NA|197aa|down_7|NZ_CP013916.1_3705700_3706291_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|243aa|down_8|NZ_CP013916.1_3706220_3706949_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|162aa|down_9|NZ_CP013916.1_3706948_3707434_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase
GCF_001971605.1_ASM197160v1	NZ_CP013916	Sphingomonas sp. LK11 chromosome, complete genome	3	3744737-3744836	3	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,WYL	Orphan	CCCCTCCCCTTCAGGGGAGGGGT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,WYL	NA|49aa|up_7|NZ_CP013916.1_3731089_3731236_-,NA|148aa|down_3|NZ_CP013916.1_3748804_3749248_-	NA|337aa|up_9|NZ_CP013916.1_3729032_3730043_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|337aa|up_8|NZ_CP013916.1_3730082_3731093_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|49aa|up_7|NZ_CP013916.1_3731089_3731236_-	NA	NA|303aa|up_6|NZ_CP013916.1_3731338_3732247_+	PRK12878, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|437aa|up_5|NZ_CP013916.1_3732352_3733663_+	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|811aa|up_4|NZ_CP013916.1_3733756_3736189_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|718aa|up_3|NZ_CP013916.1_3736185_3738339_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|421aa|up_2|NZ_CP013916.1_3738418_3739681_+	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|542aa|up_1|NZ_CP013916.1_3741139_3742765_+	cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes	NA|600aa|up_0|NZ_CP013916.1_3742914_3744714_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|128aa|down_0|NZ_CP013916.1_3744847_3745231_-	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV	NA|212aa|down_1|NZ_CP013916.1_3745227_3745863_-	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily	NA|296aa|down_2|NZ_CP013916.1_3747866_3748754_-	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|148aa|down_3|NZ_CP013916.1_3748804_3749248_-	NA	NA|281aa|down_4|NZ_CP013916.1_3749326_3750169_+	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism]	NA|341aa|down_5|NZ_CP013916.1_3752390_3753413_-	TIGR00433, biotin_synthase, biotin synthase	NA|753aa|down_6|NZ_CP013916.1_3753427_3755686_-	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed	NA|257aa|down_7|NZ_CP013916.1_3755758_3756529_-	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional	NA|140aa|down_8|NZ_CP013916.1_3756525_3756945_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|509aa|down_9|NZ_CP013916.1_3757101_3758628_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
GCF_001971605.1_ASM197160v1	NZ_CP013916	Sphingomonas sp. LK11 chromosome, complete genome	4	3756993-3757070	4	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,WYL	Orphan	TCCCCTCCCGCTTGCGGGAGGGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,WYL	NA|148aa|up_5|NZ_CP013916.1_3748804_3749248_-,NA	NA|600aa|up_9|NZ_CP013916.1_3742914_3744714_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|128aa|up_8|NZ_CP013916.1_3744847_3745231_-	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV	NA|212aa|up_7|NZ_CP013916.1_3745227_3745863_-	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily	NA|296aa|up_6|NZ_CP013916.1_3747866_3748754_-	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|148aa|up_5|NZ_CP013916.1_3748804_3749248_-	NA	NA|281aa|up_4|NZ_CP013916.1_3749326_3750169_+	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism]	NA|341aa|up_3|NZ_CP013916.1_3752390_3753413_-	TIGR00433, biotin_synthase, biotin synthase	NA|753aa|up_2|NZ_CP013916.1_3753427_3755686_-	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed	NA|257aa|up_1|NZ_CP013916.1_3755758_3756529_-	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional	NA|140aa|up_0|NZ_CP013916.1_3756525_3756945_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|509aa|down_0|NZ_CP013916.1_3757101_3758628_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|311aa|down_1|NZ_CP013916.1_3758906_3759839_-	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|236aa|down_2|NZ_CP013916.1_3759828_3760536_-	cd05233, SDR_c, classical (c) SDRs	NA|461aa|down_3|NZ_CP013916.1_3760612_3761995_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|143aa|down_4|NZ_CP013916.1_3762183_3762612_+	cd03499, SQR_TypeC_SdhC, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins	NA|128aa|down_5|NZ_CP013916.1_3762611_3762995_+	cd03495, SQR_TypeC_SdhD_like, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit-like; composed of predominantly uncharacterized bacterial proteins with similarity to the E	NA|603aa|down_6|NZ_CP013916.1_3762994_3764803_+	PRK09078, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|249aa|down_7|NZ_CP013916.1_3765241_3765988_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|593aa|down_8|NZ_CP013916.1_3765987_3767766_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|477aa|down_9|NZ_CP013916.1_3767747_3769178_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]
