assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	1	204878-205002	1	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	AAACGTGTGCCAAAACGCAATTTTCTCCTGTATAA	35	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|59aa|up_0|NZ_CP019323.1_204611_204788_-,NA|319aa|down_9|NZ_CP019323.1_213908_214865_-	NA|215aa|up_9|NZ_CP019323.1_195441_196086_-	TIGR04567, DNA-directed_RNA_polymerase_subunit_delta, DNA-directed RNA polymerase delta subunit	NA|147aa|up_8|NZ_CP019323.1_196132_196573_-	pfam09148, DUF1934, Domain of unknown function (DUF1934)	NA|273aa|up_7|NZ_CP019323.1_196638_197457_+	cd16443, LplA, lipoate-protein ligase	NA|447aa|up_6|NZ_CP019323.1_197456_198797_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|567aa|up_5|NZ_CP019323.1_198914_200615_+	NF033461, glycerol3P_ox_1, type 1 glycerol-3-phosphate oxidase	NA|200aa|up_4|NZ_CP019323.1_200751_201351_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|140aa|up_3|NZ_CP019323.1_201428_201848_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|344aa|up_2|NZ_CP019323.1_201977_203009_-	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|472aa|up_1|NZ_CP019323.1_203092_204508_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|59aa|up_0|NZ_CP019323.1_204611_204788_-	NA	NA|327aa|down_0|NZ_CP019323.1_205083_206064_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|463aa|down_1|NZ_CP019323.1_206076_207465_-	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|281aa|down_2|NZ_CP019323.1_207539_208382_-	PRK09213, PRK09213, pur operon repressor; Provisional	NA|96aa|down_3|NZ_CP019323.1_208543_208831_-	pfam06257, VEG, Biofilm formation stimulator VEG	NA|297aa|down_4|NZ_CP019323.1_208911_209802_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|190aa|down_5|NZ_CP019323.1_209788_210358_-	TIGR00334, Ribonuclease_M5, ribonuclease M5	NA|255aa|down_6|NZ_CP019323.1_210357_211122_-	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|673aa|down_7|NZ_CP019323.1_211121_213140_-	PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	NA|238aa|down_8|NZ_CP019323.1_213185_213899_-	cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|319aa|down_9|NZ_CP019323.1_213908_214865_-	NA
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	2	231543-231640	2	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	TTTTCAGGGTCTACATCGTTGTC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|784aa|up_9|NZ_CP019323.1_219330_221682_+,NA|68aa|up_8|NZ_CP019323.1_222012_222216_-,NA|81aa|up_2|NZ_CP019323.1_228841_229084_+,NA|222aa|up_1|NZ_CP019323.1_229252_229918_-,NA|232aa|down_1|NZ_CP019323.1_235902_236598_+	NA|784aa|up_9|NZ_CP019323.1_219330_221682_+	NA	NA|68aa|up_8|NZ_CP019323.1_222012_222216_-	NA	NA|241aa|up_7|NZ_CP019323.1_222350_223073_-	pfam16069, DUF4811, Domain of unknown function (DUF4811)	NA|498aa|up_6|NZ_CP019323.1_223072_224566_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|148aa|up_5|NZ_CP019323.1_224597_225041_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|342aa|up_4|NZ_CP019323.1_225154_226180_-	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed	NA|755aa|up_3|NZ_CP019323.1_226477_228742_+	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|81aa|up_2|NZ_CP019323.1_228841_229084_+	NA	NA|222aa|up_1|NZ_CP019323.1_229252_229918_-	NA	NA|356aa|up_0|NZ_CP019323.1_230027_231095_+	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only]	NA|651aa|down_0|NZ_CP019323.1_233443_235396_-	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis]	NA|232aa|down_1|NZ_CP019323.1_235902_236598_+	NA	NA|174aa|down_2|NZ_CP019323.1_236964_237486_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|223aa|down_3|NZ_CP019323.1_237624_238293_+	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|528aa|down_4|NZ_CP019323.1_238487_240071_-	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein	NA|143aa|down_5|NZ_CP019323.1_240063_240492_-	TIGR03112, 6_pyr_pter_rel, 6-pyruvoyl tetrahydropterin synthase-related domain	NA|452aa|down_6|NZ_CP019323.1_240495_241851_-	TIGR03111, glyc2_xrt_Gpos1, putative glycosyltransferase, exosortase G-associated	NA|200aa|down_7|NZ_CP019323.1_241850_242450_-	TIGR03110, exosort_Gpos, exosortase family protein XrtG	NA|396aa|down_8|NZ_CP019323.1_242488_243676_-	TIGR04145, hypothetical_protein, Firmicu-CTERM domain	NA|288aa|down_9|NZ_CP019323.1_243881_244745_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	3	340849-340974	3	CRISPRCasFinder	no	csa3	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Type I-A	CTTTGAGCTTGTAACCTTTCTACTCAAACTTGCT	34	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA|147aa|down_3|NZ_CP019323.1_345417_345858_+	NA|265aa|up_9|NZ_CP019323.1_330555_331350_-	pfam03609, EII-Sor, PTS system sorbose-specific iic component	NA|156aa|up_8|NZ_CP019323.1_331361_331829_-	pfam03830, PTSIIB_sorb, PTS system sorbose subfamily IIB component	NA|335aa|up_7|NZ_CP019323.1_331897_332902_-	cd06286, PBP1_CcpB-like, ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species	NA|151aa|up_6|NZ_CP019323.1_333125_333578_+	pfam11687, DUF3284, Domain of unknown function (DUF3284)	NA|594aa|up_5|NZ_CP019323.1_333633_335415_-	TIGR00394, lac_pts_IIC, phosphotransferase system, lactose specific, IIC component	NA|477aa|up_4|NZ_CP019323.1_335668_337099_-	PRK13511, PRK13511, 6-phospho-beta-galactosidase; Provisional	NA|113aa|up_3|NZ_CP019323.1_337131_337470_-	COG1447, CelC, Phosphotransferase system cellobiose-specific component IIA [Carbohydrate transport and metabolism]	NA|290aa|up_2|NZ_CP019323.1_337487_338357_-	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|351aa|up_1|NZ_CP019323.1_338591_339644_-	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|317aa|up_0|NZ_CP019323.1_339820_340771_+	pfam06207, DUF1002, Protein of unknown function (DUF1002)	NA|281aa|down_0|NZ_CP019323.1_341098_341941_-	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|250aa|down_1|NZ_CP019323.1_341842_342592_+	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|892aa|down_2|NZ_CP019323.1_342742_345418_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|147aa|down_3|NZ_CP019323.1_345417_345858_+	NA	NA|234aa|down_4|NZ_CP019323.1_345864_346566_+	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase	NA|499aa|down_5|NZ_CP019323.1_346804_348301_+	TIGR04265, bac_cardiolipin, cardiolipin synthase	NA|489aa|down_6|NZ_CP019323.1_348487_349954_-	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase	NA|318aa|down_7|NZ_CP019323.1_350248_351202_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|703aa|down_8|NZ_CP019323.1_351314_353423_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|127aa|down_9|NZ_CP019323.1_353557_353938_-	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	4	497844-497963	4	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	CGAAAACGTGTGACAAAACACAATTTTCTCAATATAAGCCCAAAAG	46	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|63aa|up_2|NZ_CP019323.1_495205_495394_-,NA|335aa|down_0|NZ_CP019323.1_498116_499121_-	NA|405aa|up_9|NZ_CP019323.1_487612_488827_+	cd02152, OAT, Ornithine acetyltransferase (OAT) family; also referred to as ArgJ	NA|244aa|up_8|NZ_CP019323.1_488857_489589_+	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|377aa|up_7|NZ_CP019323.1_489620_490751_+	PRK02936, argD, acetylornithine transaminase	NA|380aa|up_6|NZ_CP019323.1_490913_492053_-	PRK07671, PRK07671, bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA|303aa|up_5|NZ_CP019323.1_492074_492983_-	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|142aa|up_4|NZ_CP019323.1_493246_493672_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|462aa|up_3|NZ_CP019323.1_493793_495179_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|63aa|up_2|NZ_CP019323.1_495205_495394_-	NA	NA|108aa|up_1|NZ_CP019323.1_495632_495956_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|491aa|up_0|NZ_CP019323.1_496152_497625_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|335aa|down_0|NZ_CP019323.1_498116_499121_-	NA	NA|312aa|down_1|NZ_CP019323.1_499220_500156_-	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|475aa|down_2|NZ_CP019323.1_500354_501779_+	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|464aa|down_3|NZ_CP019323.1_501958_503350_+	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|313aa|down_4|NZ_CP019323.1_503414_504353_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|187aa|down_5|NZ_CP019323.1_504492_505053_-	COG3548, COG3548, Predicted integral membrane protein [Function unknown]	NA|270aa|down_6|NZ_CP019323.1_505064_505874_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|236aa|down_7|NZ_CP019323.1_505934_506642_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|389aa|down_8|NZ_CP019323.1_506753_507920_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|472aa|down_9|NZ_CP019323.1_508058_509474_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	5	577658-577753	5	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	GCGTGACAAAACACAATTTTCTCC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA	NA|256aa|up_9|NZ_CP019323.1_564630_565398_-	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]	NA|241aa|up_8|NZ_CP019323.1_565577_566300_+	pfam06161, DUF975, Protein of unknown function (DUF975)	NA|181aa|up_7|NZ_CP019323.1_568273_568816_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|252aa|up_6|NZ_CP019323.1_568833_569589_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|271aa|up_5|NZ_CP019323.1_569724_570537_+	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1	NA|337aa|up_4|NZ_CP019323.1_570573_571584_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|481aa|up_3|NZ_CP019323.1_571725_573168_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|338aa|up_2|NZ_CP019323.1_573164_574178_+	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|582aa|up_1|NZ_CP019323.1_574178_575924_+	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|581aa|up_0|NZ_CP019323.1_575910_577653_+	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|324aa|down_0|NZ_CP019323.1_577847_578819_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|305aa|down_1|NZ_CP019323.1_578901_579816_+	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|399aa|down_2|NZ_CP019323.1_579812_581009_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|639aa|down_3|NZ_CP019323.1_581146_583063_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|311aa|down_4|NZ_CP019323.1_583134_584067_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|274aa|down_5|NZ_CP019323.1_584112_584934_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|425aa|down_6|NZ_CP019323.1_584938_586213_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|255aa|down_7|NZ_CP019323.1_586476_587241_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|196aa|down_8|NZ_CP019323.1_587370_587958_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|383aa|down_9|NZ_CP019323.1_587966_589115_+	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	6	600507-601400	1,6,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2,cas14j	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Type II-B,Type II-C,Type II-A	GTTTTAGTAGTATGTCATTCTTAGTAGTTTAGAACC,GTTTTAGTAGTATGTCATTCTTAGTAGTTTAGAACC,GTTTTAGTAGTATGTCATTCTTAGTAGTTTAGAACC	36,36,36	0	0	NA	NA	NA:NA:NA	12,13,13	13	TypeII-B,TypeII-C,TypeV,TypeII-A	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA	NA|383aa|up_9|NZ_CP019323.1_587966_589115_+	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|396aa|up_8|NZ_CP019323.1_589202_590390_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|256aa|up_7|NZ_CP019323.1_590629_591397_+	COG4420, COG4420, Predicted membrane protein [Function unknown]	NA|677aa|up_6|NZ_CP019323.1_591462_593493_+	pfam02705, K_trans, K+ potassium transporter	NA|186aa|up_5|NZ_CP019323.1_593619_594177_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	cas9|1366aa|up_4|NZ_CP019323.1_594335_598433_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|293aa|up_3|NZ_CP019323.1_598588_599467_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_2|NZ_CP019323.1_599471_599777_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|133aa|up_1|NZ_CP019323.1_599773_600172_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	csn2|127aa|up_0|NZ_CP019323.1_600099_600480_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas14j|418aa|down_0|NZ_CP019323.1_601818_603072_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|289aa|down_1|NZ_CP019323.1_603203_604070_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|234aa|down_2|NZ_CP019323.1_604266_604968_+	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|458aa|down_3|NZ_CP019323.1_605088_606462_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|303aa|down_4|NZ_CP019323.1_606645_607554_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|118aa|down_5|NZ_CP019323.1_607696_608050_-	COG5646, COG5646, Uncharacterized conserved protein [Function unknown]	NA|634aa|down_6|NZ_CP019323.1_608134_610036_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|463aa|down_7|NZ_CP019323.1_610044_611433_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|281aa|down_8|NZ_CP019323.1_611580_612423_-	PRK02944, PRK02944, YidC family membrane integrase SpoIIIJ	NA|114aa|down_9|NZ_CP019323.1_612452_612794_-	PRK00499, rnpA, ribonuclease P; Reviewed
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	7	840014-840112	7	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	TGATGCAACAACAGGTGCTTCAAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA	NA|358aa|up_9|NZ_CP019323.1_828389_829463_+	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|312aa|up_8|NZ_CP019323.1_829483_830419_+	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|319aa|up_7|NZ_CP019323.1_830422_831379_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|208aa|up_6|NZ_CP019323.1_831571_832195_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|808aa|up_5|NZ_CP019323.1_832194_834618_+	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c	NA|409aa|up_4|NZ_CP019323.1_834839_836066_+	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|244aa|up_3|NZ_CP019323.1_836228_836960_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|100aa|up_2|NZ_CP019323.1_837033_837333_+	pfam10078, DUF2316, Uncharacterized protein conserved in bacteria (DUF2316)	NA|281aa|up_1|NZ_CP019323.1_837390_838233_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|188aa|up_0|NZ_CP019323.1_838430_838994_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|314aa|down_0|NZ_CP019323.1_840148_841090_+	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|328aa|down_1|NZ_CP019323.1_841261_842245_-	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	NA|103aa|down_2|NZ_CP019323.1_842410_842719_+	pfam08951, EntA_Immun, Enterocin A Immunity	NA|194aa|down_3|NZ_CP019323.1_842798_843380_+	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	NA|476aa|down_4|NZ_CP019323.1_843840_845268_+	pfam03577, Peptidase_C69, Peptidase family C69	NA|216aa|down_5|NZ_CP019323.1_845376_846024_+	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN	NA|411aa|down_6|NZ_CP019323.1_846097_847330_-	pfam04087, DUF389, Domain of unknown function (DUF389)	NA|393aa|down_7|NZ_CP019323.1_847350_848529_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|410aa|down_8|NZ_CP019323.1_848854_850084_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|293aa|down_9|NZ_CP019323.1_850070_850949_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	8	923742-923874	8	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	GAAGAAATTGTGAATTGTATCGCGTTTCAGCAAGTTTGAGGATAA	45	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA|90aa|down_5|NZ_CP019323.1_927732_928002_+,NA|58aa|down_9|NZ_CP019323.1_931728_931902_+	NA|243aa|up_9|NZ_CP019323.1_915337_916066_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|274aa|up_8|NZ_CP019323.1_916066_916888_-	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC	NA|503aa|up_7|NZ_CP019323.1_916891_918400_-	cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis	NA|120aa|up_6|NZ_CP019323.1_918637_918997_+	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|97aa|up_5|NZ_CP019323.1_918983_919274_+	pfam01381, HTH_3, Helix-turn-helix	NA|462aa|up_4|NZ_CP019323.1_919363_920749_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|233aa|up_3|NZ_CP019323.1_920738_921437_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|153aa|up_2|NZ_CP019323.1_921561_922020_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|230aa|up_1|NZ_CP019323.1_922238_922928_+	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|234aa|up_0|NZ_CP019323.1_922944_923646_+	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|278aa|down_0|NZ_CP019323.1_924036_924870_+	PRK11088, rrmA, 23S rRNA methyltransferase A; Provisional	NA|91aa|down_1|NZ_CP019323.1_925014_925287_-	cd10155, BsYrkD-like_DUF156, Uncharacterized protein YrkD from Bacillus subtilis and related domains; this domain superfamily was previously known as part of DUF156	NA|108aa|down_2|NZ_CP019323.1_925457_925781_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|343aa|down_3|NZ_CP019323.1_926027_927056_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|141aa|down_4|NZ_CP019323.1_927195_927618_+	TIGR02691, Protein_ArsC, arsenate reductase (thioredoxin)	NA|90aa|down_5|NZ_CP019323.1_927732_928002_+	NA	NA|242aa|down_6|NZ_CP019323.1_928049_928775_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|460aa|down_7|NZ_CP019323.1_928944_930324_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|452aa|down_8|NZ_CP019323.1_930349_931705_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|58aa|down_9|NZ_CP019323.1_931728_931902_+	NA
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	9	963589-963686	9	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	AAGAAATTGTGTTCTGTTACGCG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|163aa|up_5|NZ_CP019323.1_957715_958204_+,NA|222aa|up_3|NZ_CP019323.1_959017_959683_+,NA|82aa|down_6|NZ_CP019323.1_972344_972590_+,NA|682aa|down_9|NZ_CP019323.1_973921_975967_-	NA|267aa|up_9|NZ_CP019323.1_954479_955280_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|375aa|up_8|NZ_CP019323.1_955342_956467_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|157aa|up_7|NZ_CP019323.1_956597_957068_+	pfam00582, Usp, Universal stress protein family	NA|182aa|up_6|NZ_CP019323.1_957130_957676_+	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|163aa|up_5|NZ_CP019323.1_957715_958204_+	NA	NA|278aa|up_4|NZ_CP019323.1_958194_959028_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|222aa|up_3|NZ_CP019323.1_959017_959683_+	NA	NA|174aa|up_2|NZ_CP019323.1_959721_960243_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|401aa|up_1|NZ_CP019323.1_960405_961608_+	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	NA|626aa|up_0|NZ_CP019323.1_961620_963498_+	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing)	NA|410aa|down_0|NZ_CP019323.1_963991_965221_+	COG3919, COG3919, Predicted ATP-grasp enzyme [General function prediction only]	NA|155aa|down_1|NZ_CP019323.1_965237_965702_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|636aa|down_2|NZ_CP019323.1_966156_968064_+	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I	NA|234aa|down_3|NZ_CP019323.1_968322_969024_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|861aa|down_4|NZ_CP019323.1_969033_971616_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|146aa|down_5|NZ_CP019323.1_971664_972102_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|82aa|down_6|NZ_CP019323.1_972344_972590_+	NA	NA|138aa|down_7|NZ_CP019323.1_972733_973147_+	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain	NA|248aa|down_8|NZ_CP019323.1_973173_973917_+	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|682aa|down_9|NZ_CP019323.1_973921_975967_-	NA
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	10	1102760-1102977	10	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	GTAGCGAATTTGCGAAGCAAAGAGAAAGA	29	0	0	NA	NA	NA	3	3	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|640aa|up_8|NZ_CP019323.1_1092011_1093931_+,NA|647aa|up_7|NZ_CP019323.1_1094289_1096230_+,NA|80aa|up_2|NZ_CP019323.1_1100950_1101190_-,NA	NA|249aa|up_9|NZ_CP019323.1_1091144_1091891_+	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins	NA|640aa|up_8|NZ_CP019323.1_1092011_1093931_+	NA	NA|647aa|up_7|NZ_CP019323.1_1094289_1096230_+	NA	NA|95aa|up_6|NZ_CP019323.1_1096971_1097256_-	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair]	NA|448aa|up_5|NZ_CP019323.1_1097610_1098954_-	pfam13240, zinc_ribbon_2, zinc-ribbon domain	NA|251aa|up_4|NZ_CP019323.1_1099102_1099855_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|258aa|up_3|NZ_CP019323.1_1099923_1100697_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|80aa|up_2|NZ_CP019323.1_1100950_1101190_-	NA	NA|127aa|up_1|NZ_CP019323.1_1101273_1101654_+	pfam07997, DUF1694, Protein of unknown function (DUF1694)	NA|327aa|up_0|NZ_CP019323.1_1101674_1102655_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|484aa|down_0|NZ_CP019323.1_1103055_1104507_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|265aa|down_1|NZ_CP019323.1_1104900_1105695_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|428aa|down_2|NZ_CP019323.1_1105705_1106989_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|406aa|down_3|NZ_CP019323.1_1106975_1108193_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|146aa|down_4|NZ_CP019323.1_1108179_1108617_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|481aa|down_5|NZ_CP019323.1_1108630_1110073_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|85aa|down_6|NZ_CP019323.1_1110269_1110524_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|95aa|down_7|NZ_CP019323.1_1110516_1110801_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|779aa|down_8|NZ_CP019323.1_1111024_1113361_-	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7	NA|221aa|down_9|NZ_CP019323.1_1113440_1114103_+	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	11	1122821-1122948	11	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	GAAGAAATTGTGTTTAGTAGCGCGTTTCAGCAAGTTT	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|64aa|up_2|NZ_CP019323.1_1120568_1120760_+,NA|282aa|down_9|NZ_CP019323.1_1129621_1130467_+	NA|122aa|up_9|NZ_CP019323.1_1114943_1115309_+	pfam01521, Fe-S_biosyn, Iron-sulphur cluster biosynthesis	NA|461aa|up_8|NZ_CP019323.1_1115535_1116918_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|183aa|up_7|NZ_CP019323.1_1117113_1117662_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|300aa|up_6|NZ_CP019323.1_1118064_1118964_+	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase	NA|136aa|up_5|NZ_CP019323.1_1119355_1119763_+	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|113aa|up_4|NZ_CP019323.1_1119766_1120105_+	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|143aa|up_3|NZ_CP019323.1_1120138_1120567_+	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|64aa|up_2|NZ_CP019323.1_1120568_1120760_+	NA	NA|288aa|up_1|NZ_CP019323.1_1120876_1121740_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|284aa|up_0|NZ_CP019323.1_1121872_1122724_+	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|214aa|down_0|NZ_CP019323.1_1122956_1123598_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|254aa|down_1|NZ_CP019323.1_1123716_1124478_+	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|165aa|down_2|NZ_CP019323.1_1124711_1125206_-	cd03014, PRX_Atyp2cys, Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx)	NA|218aa|down_3|NZ_CP019323.1_1125302_1125956_+	pfam00881, Nitroreductase, Nitroreductase family	NA|268aa|down_4|NZ_CP019323.1_1125987_1126791_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|108aa|down_5|NZ_CP019323.1_1126815_1127139_-	pfam03869, Arc, Arc-like DNA binding domain	NA|172aa|down_6|NZ_CP019323.1_1127202_1127718_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|144aa|down_7|NZ_CP019323.1_1127833_1128265_+	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|342aa|down_8|NZ_CP019323.1_1128464_1129490_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|282aa|down_9|NZ_CP019323.1_1129621_1130467_+	NA
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	12	1187770-1187895	12	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	GAAGAAATTGTGTTTTGTATCGCGTTTCAGCAAGTTT	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|630aa|up_9|NZ_CP019323.1_1178870_1180760_+,NA|147aa|up_8|NZ_CP019323.1_1180759_1181200_+,NA|44aa|up_7|NZ_CP019323.1_1181212_1181344_+,NA|105aa|up_6|NZ_CP019323.1_1181761_1182076_+,NA|97aa|up_5|NZ_CP019323.1_1182075_1182366_+,NA|85aa|up_3|NZ_CP019323.1_1183600_1183855_+,NA	NA|630aa|up_9|NZ_CP019323.1_1178870_1180760_+	NA	NA|147aa|up_8|NZ_CP019323.1_1180759_1181200_+	NA	NA|44aa|up_7|NZ_CP019323.1_1181212_1181344_+	NA	NA|105aa|up_6|NZ_CP019323.1_1181761_1182076_+	NA	NA|97aa|up_5|NZ_CP019323.1_1182075_1182366_+	NA	NA|329aa|up_4|NZ_CP019323.1_1182366_1183353_+	smart00644, Ami_2, Ami_2 domain	NA|85aa|up_3|NZ_CP019323.1_1183600_1183855_+	NA	NA|176aa|up_2|NZ_CP019323.1_1183826_1184354_+	COG5346, COG5346, Predicted membrane protein [Function unknown]	NA|332aa|up_1|NZ_CP019323.1_1184586_1185582_-	cd19089, AKR_AKR14A1_2, AKR14A family of aldo-keto reductase (AKR)	NA|446aa|up_0|NZ_CP019323.1_1186341_1187679_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|851aa|down_0|NZ_CP019323.1_1188300_1190853_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|503aa|down_1|NZ_CP019323.1_1190950_1192459_+	PRK00047, glpK, glycerol kinase GlpK	NA|502aa|down_2|NZ_CP019323.1_1192493_1193999_+	PRK00047, glpK, glycerol kinase GlpK	NA|492aa|down_3|NZ_CP019323.1_1194269_1195745_+	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|234aa|down_4|NZ_CP019323.1_1196259_1196961_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|465aa|down_5|NZ_CP019323.1_1197039_1198434_+	pfam13425, O-antigen_lig, O-antigen ligase like membrane protein	NA|244aa|down_6|NZ_CP019323.1_1198452_1199184_-	COG1922, WecG, Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]	NA|355aa|down_7|NZ_CP019323.1_1199242_1200307_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|492aa|down_8|NZ_CP019323.1_1200361_1201837_+	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|273aa|down_9|NZ_CP019323.1_1201840_1202659_+	PRK00768, nadE, ammonia-dependent NAD(+) synthetase
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	13	1344989-1345061	13	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	AGAAGAGAAGAAATTGTGTTTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|155aa|up_2|NZ_CP019323.1_1341219_1341684_-,NA	NA|256aa|up_9|NZ_CP019323.1_1335413_1336181_+	PRK14135, recX, recombination regulator RecX; Provisional	NA|178aa|up_8|NZ_CP019323.1_1336265_1336799_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|254aa|up_7|NZ_CP019323.1_1336889_1337651_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|232aa|up_6|NZ_CP019323.1_1337650_1338346_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|262aa|up_5|NZ_CP019323.1_1338374_1339160_-	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|308aa|up_4|NZ_CP019323.1_1339237_1340161_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|266aa|up_3|NZ_CP019323.1_1340173_1340971_-	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional	NA|155aa|up_2|NZ_CP019323.1_1341219_1341684_-	NA	NA|451aa|up_1|NZ_CP019323.1_1341821_1343174_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|526aa|up_0|NZ_CP019323.1_1343233_1344811_+	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|334aa|down_0|NZ_CP019323.1_1345178_1346180_+	cd00542, Ntn_PVA, Penicillin V acylase (PVA), also known as conjugated bile salt acid hydrolase (CBAH), catalyzes the hydrolysis of penicillin V to yield 6-amino penicillanic acid (6-APA), an important key intermediate of semisynthetic penicillins	NA|441aa|down_1|NZ_CP019323.1_1346264_1347587_+	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|281aa|down_2|NZ_CP019323.1_1347572_1348415_-	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins	NA|352aa|down_3|NZ_CP019323.1_1348440_1349496_-	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]	NA|429aa|down_4|NZ_CP019323.1_1349771_1351058_+	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]	NA|383aa|down_5|NZ_CP019323.1_1351076_1352225_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|428aa|down_6|NZ_CP019323.1_1352783_1354067_+	TIGR02395, RNA_polymerase_sigma-54_factor, RNA polymerase sigma-54 factor	NA|195aa|down_7|NZ_CP019323.1_1354104_1354689_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|223aa|down_8|NZ_CP019323.1_1354706_1355375_+	pfam03992, ABM, Antibiotic biosynthesis monooxygenase	NA|268aa|down_9|NZ_CP019323.1_1355583_1356387_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	14	2139682-2139799	14	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	AAGTGATCTCGCCTAATTTAATAGTAACAACTCAC	35	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA	NA|123aa|up_9|NZ_CP019323.1_2129605_2129974_-	PRK14484, PRK14484, phosphotransferase mannnose-specific family component IIA; Provisional	NA|197aa|up_8|NZ_CP019323.1_2129977_2130568_-	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit	NA|331aa|up_7|NZ_CP019323.1_2130593_2131586_-	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional	NA|580aa|up_6|NZ_CP019323.1_2131828_2133568_-	TIGR00394, lac_pts_IIC, phosphotransferase system, lactose specific, IIC component	NA|116aa|up_5|NZ_CP019323.1_2133605_2133953_-	cd00215, PTS_IIA_lac, PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit	NA|285aa|up_4|NZ_CP019323.1_2133967_2134822_-	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|475aa|up_3|NZ_CP019323.1_2135119_2136544_-	PRK13511, PRK13511, 6-phospho-beta-galactosidase; Provisional	NA|585aa|up_2|NZ_CP019323.1_2136580_2138335_-	TIGR00394, lac_pts_IIC, phosphotransferase system, lactose specific, IIC component	NA|118aa|up_1|NZ_CP019323.1_2138350_2138704_-	TIGR00823, PTS_system_lactose-specific_IIA_component, phosphotransferase system enzyme II, lactose-specific, factor III	NA|285aa|up_0|NZ_CP019323.1_2138734_2139589_-	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|437aa|down_0|NZ_CP019323.1_2139886_2141197_-	cd03888, M20_PepV, M20 Peptidase Xaa-His dipeptidase (PepV) degrades hydrophobic dipeptides	NA|371aa|down_1|NZ_CP019323.1_2141220_2142333_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|355aa|down_2|NZ_CP019323.1_2142346_2143411_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|173aa|down_3|NZ_CP019323.1_2143427_2143946_-	pfam07355, GRDB, Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)	NA|450aa|down_4|NZ_CP019323.1_2143970_2145320_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|239aa|down_5|NZ_CP019323.1_2145346_2146063_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|318aa|down_6|NZ_CP019323.1_2146101_2147055_-	cd04513, Glycosylasparaginase, Glycosylasparaginase and similar proteins	NA|445aa|down_7|NZ_CP019323.1_2147308_2148643_+	cd01303, GDEase, Guanine deaminase (GDEase)	NA|448aa|down_8|NZ_CP019323.1_2148629_2149973_+	TIGR03173, pbuX, xanthine permease	NA|387aa|down_9|NZ_CP019323.1_2150150_2151311_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	15	2280955-2281066	15	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	GAAACGTGTGACAAAACACAATTTTCCCCAT	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA,NA|70aa|down_3|NZ_CP019323.1_2285527_2285737_+,NA|62aa|down_4|NZ_CP019323.1_2286452_2286638_+,NA|100aa|down_7|NZ_CP019323.1_2288544_2288844_-,NA|479aa|down_9|NZ_CP019323.1_2289145_2290582_-	NA|175aa|up_9|NZ_CP019323.1_2272392_2272917_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|71aa|up_8|NZ_CP019323.1_2272990_2273203_-	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated	NA|237aa|up_7|NZ_CP019323.1_2273227_2273938_-	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|210aa|up_6|NZ_CP019323.1_2274027_2274657_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|337aa|up_5|NZ_CP019323.1_2274712_2275723_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|295aa|up_4|NZ_CP019323.1_2275725_2276610_-	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|366aa|up_3|NZ_CP019323.1_2276554_2277652_-	PRK00591, prfA, peptide chain release factor 1; Validated	NA|194aa|up_2|NZ_CP019323.1_2277666_2278248_-	PRK04296, PRK04296, thymidine kinase; Provisional	NA|447aa|up_1|NZ_CP019323.1_2278399_2279740_+	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|328aa|up_0|NZ_CP019323.1_2279847_2280831_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|624aa|down_0|NZ_CP019323.1_2281163_2283035_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|574aa|down_1|NZ_CP019323.1_2283034_2284756_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|226aa|down_2|NZ_CP019323.1_2284849_2285527_+	pfam02517, Abi, CAAX protease self-immunity	NA|70aa|down_3|NZ_CP019323.1_2285527_2285737_+	NA	NA|62aa|down_4|NZ_CP019323.1_2286452_2286638_+	NA	NA|348aa|down_5|NZ_CP019323.1_2287294_2288338_-	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls	NA|73aa|down_6|NZ_CP019323.1_2288339_2288558_-	pfam04531, Phage_holin_1, Bacteriophage holin	NA|100aa|down_7|NZ_CP019323.1_2288544_2288844_-	NA	NA|99aa|down_8|NZ_CP019323.1_2288859_2289156_-	pfam09693, Phage_XkdX, Phage uncharacterized protein (Phage_XkdX)	NA|479aa|down_9|NZ_CP019323.1_2289145_2290582_-	NA
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	16	2347913-2348002	16	CRISPRCasFinder	no	cas14j	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Unclear	AAAACATGTGCCAAAACACAATT	23	0	0	NA	NA	NA	1	1	TypeV	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|241aa|up_9|NZ_CP019323.1_2337605_2338328_+,NA|63aa|up_7|NZ_CP019323.1_2339291_2339480_-,NA|260aa|down_0|NZ_CP019323.1_2348096_2348876_-,NA|285aa|down_1|NZ_CP019323.1_2348907_2349762_-,NA|498aa|down_5|NZ_CP019323.1_2354630_2356124_-,NA|375aa|down_6|NZ_CP019323.1_2356135_2357260_-	NA|241aa|up_9|NZ_CP019323.1_2337605_2338328_+	NA	NA|239aa|up_8|NZ_CP019323.1_2338509_2339226_+	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein	NA|63aa|up_7|NZ_CP019323.1_2339291_2339480_-	NA	NA|82aa|up_6|NZ_CP019323.1_2339513_2339759_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|237aa|up_5|NZ_CP019323.1_2339966_2340677_+	pfam12695, Abhydrolase_5, Alpha/beta hydrolase family	cas14j|390aa|up_4|NZ_CP019323.1_2340759_2341929_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|312aa|up_3|NZ_CP019323.1_2342102_2343038_-	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|162aa|up_2|NZ_CP019323.1_2343290_2343776_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|664aa|up_1|NZ_CP019323.1_2343861_2345853_-	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|459aa|up_0|NZ_CP019323.1_2345842_2347219_-	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252)	NA|260aa|down_0|NZ_CP019323.1_2348096_2348876_-	NA	NA|285aa|down_1|NZ_CP019323.1_2348907_2349762_-	NA	NA|675aa|down_2|NZ_CP019323.1_2349751_2351776_-	pfam03170, BcsB, Bacterial cellulose synthase subunit	NA|418aa|down_3|NZ_CP019323.1_2351822_2353076_-	COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	NA|521aa|down_4|NZ_CP019323.1_2353081_2354644_-	COG5298, COG5298, Uncharacterized protein conserved in bacteria [Function unknown]	NA|498aa|down_5|NZ_CP019323.1_2354630_2356124_-	NA	NA|375aa|down_6|NZ_CP019323.1_2356135_2357260_-	NA	NA|277aa|down_7|NZ_CP019323.1_2357392_2358223_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|125aa|down_8|NZ_CP019323.1_2358544_2358919_-	COG5646, COG5646, Uncharacterized conserved protein [Function unknown]	NA|583aa|down_9|NZ_CP019323.1_2358974_2360723_-	COG5617, COG5617, Predicted integral membrane protein [Function unknown]
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	17	2382614-2382729	17	CRISPRCasFinder	no		cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Orphan	CGATACAAAACATAATTTCTTCCGCTTAAC	30	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|60aa|up_5|NZ_CP019323.1_2374889_2375069_-,NA|51aa|down_4|NZ_CP019323.1_2387500_2387653_-	NA|149aa|up_9|NZ_CP019323.1_2371368_2371815_+	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|286aa|up_8|NZ_CP019323.1_2371979_2372837_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|339aa|up_7|NZ_CP019323.1_2372983_2374000_-	pfam11797, DUF3324, Protein of unknown function C-terminal (DUF3324)	NA|204aa|up_6|NZ_CP019323.1_2374098_2374710_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|60aa|up_5|NZ_CP019323.1_2374889_2375069_-	NA	NA|230aa|up_4|NZ_CP019323.1_2375090_2375780_-	pfam02525, Flavodoxin_2, Flavodoxin-like fold	NA|259aa|up_3|NZ_CP019323.1_2375846_2376623_-	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|326aa|up_2|NZ_CP019323.1_2376546_2377524_-	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|322aa|up_1|NZ_CP019323.1_2377549_2378515_-	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|600aa|up_0|NZ_CP019323.1_2378914_2380714_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|729aa|down_0|NZ_CP019323.1_2382814_2385001_-	cd01951, lectin_L-type, legume lectins	NA|395aa|down_1|NZ_CP019323.1_2385322_2386507_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|130aa|down_2|NZ_CP019323.1_2386569_2386959_+	pfam01638, HxlR, HxlR-like helix-turn-helix	NA|145aa|down_3|NZ_CP019323.1_2387065_2387500_+	PRK04435, PRK04435, ACT domain-containing protein	NA|51aa|down_4|NZ_CP019323.1_2387500_2387653_-	NA	NA|277aa|down_5|NZ_CP019323.1_2387880_2388711_-	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR)	NA|141aa|down_6|NZ_CP019323.1_2388818_2389241_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|443aa|down_7|NZ_CP019323.1_2389309_2390638_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|196aa|down_8|NZ_CP019323.1_2390812_2391400_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|191aa|down_9|NZ_CP019323.1_2391474_2392047_+	PRK07116, PRK07116, flavodoxin; Provisional
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	18	2471625-2471747	18	CRISPRCasFinder	no	csa3	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Type I-A	AAACGCGTGACAAAACGCAACTTTTTCCGTTTAGTTCAAAAA	42	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|66aa|up_8|NZ_CP019323.1_2461986_2462184_-,NA|137aa|up_6|NZ_CP019323.1_2463547_2463958_-,NA	NA|900aa|up_9|NZ_CP019323.1_2459221_2461921_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|66aa|up_8|NZ_CP019323.1_2461986_2462184_-	NA	NA|401aa|up_7|NZ_CP019323.1_2462263_2463466_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|137aa|up_6|NZ_CP019323.1_2463547_2463958_-	NA	NA|192aa|up_5|NZ_CP019323.1_2463957_2464533_-	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|492aa|up_4|NZ_CP019323.1_2464548_2466024_-	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA|293aa|up_3|NZ_CP019323.1_2466119_2466998_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|1013aa|up_2|NZ_CP019323.1_2467222_2470261_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|194aa|up_1|NZ_CP019323.1_2470602_2471184_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|65aa|up_0|NZ_CP019323.1_2471223_2471418_-	pfam04024, PspC, PspC domain	NA|277aa|down_0|NZ_CP019323.1_2471824_2472655_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|230aa|down_1|NZ_CP019323.1_2472774_2473464_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|354aa|down_2|NZ_CP019323.1_2473467_2474529_-	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|444aa|down_3|NZ_CP019323.1_2474538_2475870_-	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase	NA|274aa|down_4|NZ_CP019323.1_2475912_2476734_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|230aa|down_5|NZ_CP019323.1_2477418_2478108_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|183aa|down_6|NZ_CP019323.1_2478387_2478936_+	pfam02588, YitT_membrane, Uncharacterized 5xTM membrane BCR, YitT family COG1284	NA|208aa|down_7|NZ_CP019323.1_2479023_2479647_-	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862)	NA|643aa|down_8|NZ_CP019323.1_2479726_2481655_-	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|190aa|down_9|NZ_CP019323.1_2482364_2482934_+	pfam16729, DUF5067, Domain of unknown function (DUF5067)
GCF_001971585.1_ASM197158v1	NZ_CP019323	Lactobacillus allii strain WiKim39 chromosome, complete genome	19	2503094-2503195	19	CRISPRCasFinder	no	csa3	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	Type I-A	CAGATGCTCTACCAGCTGAGCTAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|492aa|up_1|NZ_CP019323.1_2498593_2500069_-,NA	NA|482aa|up_9|NZ_CP019323.1_2490466_2491912_+	pfam13520, AA_permease_2, Amino acid permease	NA|395aa|up_8|NZ_CP019323.1_2492055_2493240_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|141aa|up_7|NZ_CP019323.1_2493396_2493819_-	PRK10562, PRK10562, putative acetyltransferase; Provisional	NA|107aa|up_6|NZ_CP019323.1_2494000_2494321_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|273aa|up_5|NZ_CP019323.1_2494317_2495136_-	pfam02698, DUF218, DUF218 domain	NA|550aa|up_4|NZ_CP019323.1_2495443_2497093_+	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|214aa|up_3|NZ_CP019323.1_2497107_2497749_+	pfam17802, SpaA, Prealbumin-like fold domain	NA|177aa|up_2|NZ_CP019323.1_2497855_2498386_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|492aa|up_1|NZ_CP019323.1_2498593_2500069_-	NA	NA|106aa|up_0|NZ_CP019323.1_2500168_2500486_-	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
GCF_001971585.1_ASM197158v1	NZ_CP019324	Lactobacillus allii strain WiKim39 plasmid pWIKIM01, complete sequence	1	27820-27976	1	CRISPRCasFinder	no			Orphan	AAACCCTTGCTGCGCGCAGAACTGTAAATTCTACAGT	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas9,cas1,cas2,csn2,cas14j,DEDDh,DinG	NA|176aa|up_9|NZ_CP019324.1_14237_14765_+,NA|72aa|up_1|NZ_CP019324.1_25813_26029_-,NA	NA|176aa|up_9|NZ_CP019324.1_14237_14765_+	NA	NA|195aa|up_8|NZ_CP019324.1_14873_15458_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|342aa|up_7|NZ_CP019324.1_15720_16746_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|402aa|up_6|NZ_CP019324.1_17033_18239_+	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|158aa|up_5|NZ_CP019324.1_19307_19781_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|443aa|up_4|NZ_CP019324.1_20706_22035_+	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	NA|455aa|up_3|NZ_CP019324.1_22693_24058_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|413aa|up_2|NZ_CP019324.1_24288_25527_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|72aa|up_1|NZ_CP019324.1_25813_26029_-	NA	NA|262aa|up_0|NZ_CP019324.1_26035_26821_-	pfam13614, AAA_31, AAA domain	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
