The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018319	Pseudomonas frederiksbergensis strain AS1, complete genome	6126864	197899	204181	6126864	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
WP_076031479.1|197899_198292_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	80.6	2.9e-54
WP_076027900.1|198293_198656_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	68.3	9.9e-41
WP_076027901.1|198655_198949_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	71.7	1.4e-32
WP_074878158.1|198945_199281_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	80.2	6.1e-45
WP_076027902.1|199277_200279_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	85.3	1.1e-166
WP_076027903.1|200369_201377_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_076027904.1|201505_202900_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_074878166.1|202900_204181_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.3	1.7e-98
>prophage 2
NZ_CP018319	Pseudomonas frederiksbergensis strain AS1, complete genome	6126864	2910381	2959305	6126864	holin,protease	Klosneuvirus(20.0%)	40	NA	NA
WP_074871538.1|2910381_2912085_-|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	29.7	1.0e-50
WP_074871536.1|2912229_2913702_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_033060362.1|2913809_2914403_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_076029476.1|2914725_2916732_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.8	5.4e-19
WP_074871534.1|2916919_2918098_-|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.1	2.9e-25
WP_074871533.1|2918094_2918940_-|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_076029477.1|2919017_2919968_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_076029478.1|2920406_2921783_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_074871528.1|2922356_2923460_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_074871527.1|2923617_2923881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076029479.1|2924270_2925434_-	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
WP_076029480.1|2925448_2925925_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_076029481.1|2926069_2927035_-	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_008151915.1|2927177_2928065_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_076029482.1|2928140_2929085_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_076029483.1|2929307_2930267_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_076029484.1|2930395_2930812_-	DUF3010 family protein	NA	NA	NA	NA	NA
WP_074871517.1|2930873_2931275_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_007907542.1|2931511_2932489_+	membrane dipeptidase	NA	NA	NA	NA	NA
WP_008033249.1|2932567_2933098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076029485.1|2933113_2935174_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_076029486.1|2935395_2937345_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_076029487.1|2937344_2938565_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_030128552.1|2938580_2939351_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_076029488.1|2939473_2940040_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_038981128.1|2940881_2942177_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_074871501.1|2942459_2943560_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
WP_076029489.1|2943665_2944490_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046045314.1|2945490_2946531_-	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_076029490.1|2946662_2947379_+	conjugal transfer protein TraX	NA	NA	NA	NA	NA
WP_074871495.1|2947664_2948918_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	2.0e-101
WP_007947735.1|2948941_2950192_+	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
WP_033053963.1|2950206_2950536_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_076029491.1|2950532_2953550_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_076029492.1|2953725_2954358_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_074871490.1|2954491_2955349_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_074871488.1|2955554_2956754_+	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.4	6.0e-10
WP_076029493.1|2957078_2957639_+	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_076029494.1|2957640_2958528_-	acyltransferase	NA	NA	NA	NA	NA
WP_076029495.1|2958798_2959305_+|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
>prophage 3
NZ_CP018319	Pseudomonas frederiksbergensis strain AS1, complete genome	6126864	3781295	3791549	6126864	holin	Pseudomonas_phage(50.0%)	9	NA	NA
WP_076029938.1|3781295_3782153_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	8.4e-06
WP_008154012.1|3782258_3783266_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	6.6e-34
WP_008154011.1|3783748_3784072_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_076029939.1|3784214_3786794_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	21.6	2.0e-26
WP_076031545.1|3787005_3787740_+	helix-turn-helix transcriptional regulator	NA	B5TK58	Pseudomonas_phage	95.1	4.2e-131
WP_074879641.1|3788484_3788832_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	88.7	1.4e-52
WP_076029940.1|3789053_3789617_+	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	80.1	7.3e-83
WP_076031546.1|3789912_3790413_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	83.7	6.7e-72
WP_076029942.1|3790496_3791549_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	59.7	1.0e-109
>prophage 4
NZ_CP018319	Pseudomonas frederiksbergensis strain AS1, complete genome	6126864	4284469	4293218	6126864		Enterobacteria_phage(37.5%)	9	NA	NA
WP_076030262.1|4284469_4285414_+	glycosyltransferase family 2 protein	NA	E7C9N8	Salmonella_phage	54.4	6.7e-89
WP_076030263.1|4285419_4285806_+	GtrA family protein	NA	NA	NA	NA	NA
WP_083671749.1|4285852_4286980_-	hypothetical protein	NA	A0A076GD34	Sinorhizobium_phage	41.8	6.8e-64
WP_076030265.1|4287310_4287859_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.1	5.1e-49
WP_076030266.1|4287858_4288740_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	60.6	1.8e-99
WP_076030267.1|4288747_4289653_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	1.9e-24
WP_076030268.1|4289649_4290750_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	45.8	4.0e-85
WP_156886733.1|4291120_4291981_+	hypothetical protein	NA	C7U0V2	Enterobacteria_phage	36.7	1.4e-05
WP_076030270.1|4292051_4293218_-	nucleotide sugar dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.3	5.5e-109
>prophage 5
NZ_CP018319	Pseudomonas frederiksbergensis strain AS1, complete genome	6126864	4942496	4955152	6126864	integrase	uncultured_Caudovirales_phage(58.33%)	21	4932094:4932110	4952383:4952399
4932094:4932110	attL	CGCGCTCTTTCGGCATG	NA	NA	NA	NA
WP_076030664.1|4942496_4943546_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	58.0	3.1e-103
WP_076030665.1|4943547_4943790_-	DUF4224 domain-containing protein	NA	A0A2H4JF29	uncultured_Caudovirales_phage	40.5	1.3e-09
WP_076030666.1|4943834_4944191_-	hypothetical protein	NA	H2BD40	Pseudomonas_phage	67.9	7.4e-41
WP_076030667.1|4944243_4944678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076031580.1|4944836_4945049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030669.1|4945453_4945672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083671757.1|4946047_4946422_-	DUF4406 domain-containing protein	NA	L7TKQ2	Pseudomonas_virus	52.6	9.0e-21
WP_076030671.1|4946418_4947057_-	hypothetical protein	NA	A0A2I7R6M5	Vibrio_phage	30.7	5.7e-15
WP_076030672.1|4947157_4947400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030673.1|4947396_4947609_-	hypothetical protein	NA	A0A2H4J2C6	uncultured_Caudovirales_phage	55.1	9.3e-15
WP_076030674.1|4947583_4947784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076030675.1|4947935_4948217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030676.1|4949344_4949728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076030677.1|4949803_4950265_-	hypothetical protein	NA	A0A2H4J101	uncultured_Caudovirales_phage	86.9	1.6e-72
WP_076030678.1|4950261_4950504_-	hypothetical protein	NA	A0A2H4J1H1	uncultured_Caudovirales_phage	46.2	5.6e-08
WP_076030679.1|4950500_4952159_-	Heme peroxidase	NA	A0A2H4J6F0	uncultured_Caudovirales_phage	75.0	5.0e-196
WP_156886770.1|4952155_4952848_-	hypothetical protein	NA	A0A2H4J1F0	uncultured_Caudovirales_phage	93.1	1.7e-118
4952383:4952399	attR	CGCGCTCTTTCGGCATG	NA	NA	NA	NA
WP_076030681.1|4953065_4953260_-	hypothetical protein	NA	Q9MC67	Pseudomonas_phage	44.4	5.5e-06
WP_076030682.1|4953256_4953448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076030683.1|4953444_4953861_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076030684.1|4954393_4955152_-	hypothetical protein	NA	A0A1B0YZY3	Pseudomonas_phage	48.9	2.4e-65
>prophage 6
NZ_CP018319	Pseudomonas frederiksbergensis strain AS1, complete genome	6126864	4960057	4978451	6126864	terminase,head	Pseudomonas_phage(60.0%)	27	NA	NA
WP_076031581.1|4960057_4960858_-	XRE family transcriptional regulator	NA	A0A0A0YR73	Pseudomonas_phage	54.8	1.9e-76
WP_076030695.1|4960974_4961184_+	XRE family transcriptional regulator	NA	A0A2H4JF66	uncultured_Caudovirales_phage	75.8	1.1e-20
WP_076030696.1|4961217_4961571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076031582.1|4961593_4961845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033061777.1|4962015_4962447_+	Rha family transcriptional regulator	NA	A0A2D1GNM7	Pseudomonas_phage	55.2	1.6e-34
WP_076030697.1|4962618_4963482_+	replication protein	NA	A0A0S2SYI8	Pseudomonas_phage	52.7	9.6e-50
WP_076030698.1|4963471_4964278_+	AAA family ATPase	NA	A0A2H4J3E5	uncultured_Caudovirales_phage	60.3	4.9e-88
WP_076030699.1|4964369_4964837_+	hypothetical protein	NA	A0A0H5AUD0	Pseudomonas_phage	77.4	3.3e-65
WP_076030700.1|4964818_4965388_+	hypothetical protein	NA	A0A1P8VVT6	Streptococcus_phage	37.4	2.1e-21
WP_076030701.1|4965384_4965960_+	recombination protein NinG	NA	A0A059VA66	Pseudomonas_phage	72.0	1.3e-74
WP_076030702.1|4965956_4966502_+	hypothetical protein	NA	A0A0H5AWB8	Pseudomonas_phage	61.9	3.5e-58
WP_076030704.1|4967086_4967425_+	MFS transporter	NA	A0A088FVG2	Escherichia_phage	48.2	1.5e-19
WP_076030705.1|4967421_4967766_+	hypothetical protein	NA	A0A193GYR7	Enterobacter_phage	41.9	7.3e-09
WP_076030706.1|4967786_4968260_+	DUF2514 family protein	NA	NA	NA	NA	NA
WP_076030707.1|4968312_4968501_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030708.1|4968886_4969141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030709.1|4969149_4969767_+	hypothetical protein	NA	G8C7P2	Escherichia_phage	45.6	1.3e-27
WP_076030710.1|4969768_4971256_+|terminase	terminase	terminase	A0A2H4J2I1	uncultured_Caudovirales_phage	84.3	2.0e-257
WP_076030711.1|4971252_4972665_+	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	87.9	3.7e-240
WP_076030712.1|4972639_4973707_+|head	phage head morphogenesis protein	head	A0A2H4J831	uncultured_Caudovirales_phage	55.6	1.2e-105
WP_076031584.1|4973788_4974517_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	77.7	2.9e-100
WP_076030713.1|4974528_4975470_+	Ig domain-containing protein	NA	A0A1B0VMF8	Pseudomonas_phage	70.0	3.6e-127
WP_076030714.1|4975521_4975779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030715.1|4975782_4976283_+	hypothetical protein	NA	A0A1B0VND3	Pseudomonas_phage	72.7	5.3e-61
WP_076030716.1|4976285_4976675_+	hypothetical protein	NA	A0A1B0VRJ4	Pseudomonas_phage	45.7	3.6e-20
WP_076030718.1|4977060_4977480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076030719.1|4977545_4978451_+	hypothetical protein	NA	A0A2I6PI45	Pseudomonas_phage	34.1	1.2e-39
>prophage 1
NZ_CP018320	Pseudomonas frederiksbergensis strain AS1 plasmid, complete sequence	81841	0	2558	81841		Rhizobium_phage(100.0%)	2	NA	NA
WP_019694519.1|1483_1693_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080690697.1|1811_2558_-	hypothetical protein	NA	A0A068CDF3	Rhizobium_phage	42.9	2.5e-22
>prophage 2
NZ_CP018320	Pseudomonas frederiksbergensis strain AS1 plasmid, complete sequence	81841	21303	34592	81841	transposase	uncultured_Caudovirales_phage(25.0%)	13	NA	NA
WP_031319755.1|21303_22047_-	universal stress protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	61.1	5.0e-79
WP_011117418.1|23457_24372_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_011117419.1|24676_25450_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	28.5	4.0e-15
WP_110389057.1|25941_26259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011117421.1|26150_26858_-|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	85.1	4.8e-108
WP_011154423.1|26815_27202_-|transposase	transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	88.3	1.4e-56
WP_011117423.1|28028_29645_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	43.7	1.2e-58
WP_011117424.1|29881_30073_-	2-hydroxymuconate tautomerase	NA	NA	NA	NA	NA
WP_011117425.1|30127_30922_-	2-oxo-3-hexenedioate decarboxylase	NA	NA	NA	NA	NA
WP_011117426.1|30918_31959_-	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	35.8	2.3e-45
WP_011117427.1|31970_32894_-	acetaldehyde dehydrogenase (acetylating)	NA	E5EQ71	Micromonas_sp._RCC1109_virus	36.6	5.8e-37
WP_011117428.1|32913_33699_-	2-oxopent-4-enoate hydratase	NA	NA	NA	NA	NA
WP_011117429.1|33710_34592_-	alpha/beta fold hydrolase	NA	A0A023W6C9	Mycobacterium_phage	39.2	2.4e-11
>prophage 3
NZ_CP018320	Pseudomonas frederiksbergensis strain AS1 plasmid, complete sequence	81841	43679	46446	81841		Brucella_phage(66.67%)	4	NA	NA
WP_011117436.1|43679_43976_-	putative addiction module antidote protein	NA	A0A141GEX5	Brucella_phage	44.6	4.3e-10
WP_011117437.1|43972_44275_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	53.7	1.6e-20
WP_011117438.1|44484_44889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011117440.1|45618_46446_+	DUF945 domain-containing protein	NA	K4F5L3	Cronobacter_phage	43.7	3.0e-48
>prophage 4
NZ_CP018320	Pseudomonas frederiksbergensis strain AS1 plasmid, complete sequence	81841	70758	71526	81841		Brevibacillus_phage(100.0%)	1	NA	NA
WP_011117384.1|70758_71526_+	ParA family protein	NA	A0A0K2FLP4	Brevibacillus_phage	29.6	3.6e-16
