assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001952875.1_ASM195287v1	NZ_CP015382	Klebsiella pneumoniae strain CN1 chromosome, complete genome	1	597905-598198	1	PILER-CR	no		cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	Orphan	GAATAGCGGAGAAAGGATGAATGACTGTCCACGACGCTATACCAAAAGAACGCGGCTTATCG	62	1	2	597967-598025|597967-598025	NZ_CP015382.1_598199-598257|NZ_CP015382.1_597851-597909	NA	2	2	Orphan	cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	NA,NA|56aa|down_2|NZ_CP015382.1_599581_599749_-	NA|192aa|up_9|NZ_CP015382.1_586447_587023_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|up_8|NZ_CP015382.1_587032_587623_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|129aa|up_7|NZ_CP015382.1_587648_588035_-	PRK12497, PRK12497, YraN family protein	NA|703aa|up_6|NZ_CP015382.1_587992_590101_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|288aa|up_5|NZ_CP015382.1_590164_591028_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|524aa|up_4|NZ_CP015382.1_591228_592800_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|444aa|up_3|NZ_CP015382.1_593192_594524_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|NZ_CP015382.1_594550_595321_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|NZ_CP015382.1_595347_596238_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|NZ_CP015382.1_596302_597448_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|155aa|down_0|NZ_CP015382.1_598325_598790_-	pfam12869, tRNA_anti-like, tRNA_anti-like	NA|137aa|down_1|NZ_CP015382.1_599097_599508_+	COG3678, CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]	NA|56aa|down_2|NZ_CP015382.1_599581_599749_-	NA	NA|234aa|down_3|NZ_CP015382.1_599773_600475_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_4|NZ_CP015382.1_600579_601476_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|123aa|down_5|NZ_CP015382.1_601517_601886_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_6|NZ_CP015382.1_602012_602999_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|131aa|down_7|NZ_CP015382.1_603079_603472_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|99aa|down_8|NZ_CP015382.1_603817_604114_-	pfam13997, YqjK, YqjK-like protein	NA|133aa|down_9|NZ_CP015382.1_604110_604509_-	COG5393, COG5393, Predicted membrane protein [Function unknown]
GCF_001952875.1_ASM195287v1	NZ_CP015382	Klebsiella pneumoniae strain CN1 chromosome, complete genome	2	1069045-1071450	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	8	12	1069074-1069105|1069074-1069105|1069074-1069105|1069074-1069105|1069257-1069289|1069624-1069655|1070539-1070570|1070722-1070753|1070783-1070814|1071271-1071302|1071332-1071363|1071332-1071363	NZ_CP015383.1_116659-116628|NZ_CP015383.1_119992-119961|NZ_CP015383.1_134875-134844|NZ_CP015383.1_137663-137632|NZ_CP015382.1_2155617-2155585|NZ_CP015382.1_2112228-2112197|NZ_CP015382.1_2150153-2150122|NZ_CP015383.1_118572-118541|NZ_CP015383.1_116831-116862|NZ_CP015382.1_2147014-2146983|NZ_CP015383.1_119648-119617|NZ_CP015383.1_137319-137288	I-E:I-E:I-E	38,39,39	39	TypeI-E	cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	NA,NA|674aa|down_0|NZ_CP015382.1_1071530_1073552_-	NA|571aa|up_9|NZ_CP015382.1_1057752_1059465_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP015382.1_1059563_1060298_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|888aa|up_7|NZ_CP015382.1_1060504_1063168_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_6|NZ_CP015382.1_1063179_1064736_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|181aa|up_5|NZ_CP015382.1_1064732_1065275_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP015382.1_1065293_1066349_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP015382.1_1066359_1067106_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP015382.1_1067087_1067738_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP015382.1_1067734_1068655_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP015382.1_1068654_1068948_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|674aa|down_0|NZ_CP015382.1_1071530_1073552_-	NA	NA|396aa|down_1|NZ_CP015382.1_1073538_1074726_-	pfam11340, DUF3142, Protein of unknown function (DUF3142)	NA|352aa|down_2|NZ_CP015382.1_1074761_1075817_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|469aa|down_3|NZ_CP015382.1_1076063_1077470_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_4|NZ_CP015382.1_1077479_1078388_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_5|NZ_CP015382.1_1078397_1079825_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_6|NZ_CP015382.1_1079824_1080430_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|109aa|down_7|NZ_CP015382.1_1080480_1080807_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|106aa|down_8|NZ_CP015382.1_1080947_1081265_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_9|NZ_CP015382.1_1081284_1081995_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase
GCF_001952875.1_ASM195287v1	NZ_CP015382	Klebsiella pneumoniae strain CN1 chromosome, complete genome	3	2119097-2119192	2	CRISPRCasFinder	no		cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	Orphan	TTGTGCCAACAGAATGCCAACAAAGTGCCA	30	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	NA|95aa|up_7|NZ_CP015382.1_2115771_2116056_-,NA|42aa|up_4|NZ_CP015382.1_2116767_2116893_-,NA|49aa|up_0|NZ_CP015382.1_2118563_2118710_+,NA|101aa|down_1|NZ_CP015382.1_2121021_2121324_+,NA|142aa|down_2|NZ_CP015382.1_2121320_2121746_+,NA|69aa|down_3|NZ_CP015382.1_2121742_2121949_+,NA|96aa|down_4|NZ_CP015382.1_2122615_2122903_+,NA|98aa|down_5|NZ_CP015382.1_2122902_2123196_+,NA|66aa|down_6|NZ_CP015382.1_2123965_2124163_+	NA|227aa|up_9|NZ_CP015382.1_2114233_2114914_-	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|282aa|up_8|NZ_CP015382.1_2114910_2115756_-	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|95aa|up_7|NZ_CP015382.1_2115771_2116056_-	NA	NA|145aa|up_6|NZ_CP015382.1_2116126_2116561_-	pfam11672, DUF3268, zinc-finger-containing domain	NA|75aa|up_5|NZ_CP015382.1_2116550_2116775_-	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|42aa|up_4|NZ_CP015382.1_2116767_2116893_-	NA	NA|199aa|up_3|NZ_CP015382.1_2117306_2117903_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|71aa|up_2|NZ_CP015382.1_2118011_2118224_+	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|95aa|up_1|NZ_CP015382.1_2118244_2118529_+	pfam05269, Phage_CII, Bacteriophage CII protein	NA|49aa|up_0|NZ_CP015382.1_2118563_2118710_+	NA	NA|472aa|down_0|NZ_CP015382.1_2119606_2121022_+	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|101aa|down_1|NZ_CP015382.1_2121021_2121324_+	NA	NA|142aa|down_2|NZ_CP015382.1_2121320_2121746_+	NA	NA|69aa|down_3|NZ_CP015382.1_2121742_2121949_+	NA	NA|96aa|down_4|NZ_CP015382.1_2122615_2122903_+	NA	NA|98aa|down_5|NZ_CP015382.1_2122902_2123196_+	NA	NA|66aa|down_6|NZ_CP015382.1_2123965_2124163_+	NA	NA|86aa|down_7|NZ_CP015382.1_2124740_2124998_+	pfam06440, DNA_pol3_theta, DNA polymerase III, theta subunit	NA|156aa|down_8|NZ_CP015382.1_2125199_2125667_+	pfam05772, NinB, NinB protein	NA|57aa|down_9|NZ_CP015382.1_2125647_2125818_+	PRK09689, PRK09689, prophage protein NinE; Provisional
GCF_001952875.1_ASM195287v1	NZ_CP015382	Klebsiella pneumoniae strain CN1 chromosome, complete genome	4	4130249-4130388	3	CRISPRCasFinder	no	DEDDh	cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	Unclear	TGCCGGGTGGCGGCTGGCGCCTTACCCGGCCTACAAAACCGAAGCAGCAG	50	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL	NA,NA	NA|428aa|up_9|NZ_CP015382.1_4119983_4121267_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|467aa|up_8|NZ_CP015382.1_4121416_4122817_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|NZ_CP015382.1_4122862_4123555_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|NZ_CP015382.1_4123640_4124039_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|NZ_CP015382.1_4124096_4125341_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|NZ_CP015382.1_4125446_4125905_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_3|NZ_CP015382.1_4126162_4127620_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|151aa|up_2|NZ_CP015382.1_4127662_4128115_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_1|NZ_CP015382.1_4128117_4129173_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|287aa|up_0|NZ_CP015382.1_4129332_4130193_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|NZ_CP015382.1_4130415_4130631_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|NZ_CP015382.1_4130633_4131857_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|199aa|down_2|NZ_CP015382.1_4131869_4132466_-	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|213aa|down_3|NZ_CP015382.1_4132472_4133111_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_4|NZ_CP015382.1_4133103_4133898_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_5|NZ_CP015382.1_4133890_4135129_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_6|NZ_CP015382.1_4135132_4136476_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|247aa|down_7|NZ_CP015382.1_4136887_4137628_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_8|NZ_CP015382.1_4137598_4138366_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|194aa|down_9|NZ_CP015382.1_4138440_4139022_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase
