The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	123987	130512	3038647	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|123987_124440_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|124445_124781_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|124997_125426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732220.1|125437_125854_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
WP_012952083.1|126131_126521_+	DUF5072 family protein	NA	NA	NA	NA	NA
WP_003721744.1|126533_127046_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|127093_127396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012952082.1|127437_127842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012952081.1|127828_129697_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003734720.1|129693_130512_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	7.2e-39
>prophage 2
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	371491	379335	3038647		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722610.1|371491_372451_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
WP_012952019.1|372569_373553_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.2	5.8e-51
WP_012952018.1|373569_374631_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_012952017.1|374672_376403_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	54.0	3.0e-175
WP_003722606.1|376510_377386_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003722605.1|377387_378356_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_003722604.1|378363_379335_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
>prophage 3
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	521539	560770	3038647	tail,terminase,holin	Listeria_phage(98.18%)	59	NA	NA
WP_012951970.1|521539_522898_-	recombinase family protein	NA	Q8LTD8	Listeria_phage	99.8	1.1e-257
WP_012951969.1|522958_524473_-	putative DNA binding domain-containing protein	NA	NA	NA	NA	NA
WP_012951968.1|524677_525112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951967.1|525170_525878_-	hypothetical protein	NA	A0A0B5CTT6	Listeria_phage	99.1	5.3e-123
WP_012951966.1|525904_526396_-	hypothetical protein	NA	A8ATX4	Listeria_phage	99.4	2.9e-91
WP_012951965.1|526426_526732_-	helix-turn-helix transcriptional regulator	NA	A8ASM2	Listeria_phage	68.5	1.8e-27
WP_012951964.1|526894_527146_+	helix-turn-helix transcriptional regulator	NA	A8ASM3	Listeria_phage	76.7	9.3e-22
WP_003733687.1|527149_527344_+	hypothetical protein	NA	A0A059T6E5	Listeria_phage	95.3	1.4e-25
WP_012951963.1|527302_527662_-	DUF2513 domain-containing protein	NA	A0A2H4J4K9	uncultured_Caudovirales_phage	26.3	2.1e-06
WP_012951962.1|527726_527963_+	hypothetical protein	NA	A0A059T5E9	Listeria_phage	97.4	2.8e-36
WP_012951961.1|527959_528241_+	hypothetical protein	NA	A8ATX8	Listeria_phage	96.7	3.6e-38
WP_003733684.1|528242_528440_-	hypothetical protein	NA	Q9T179	Listeria_phage	96.0	4.0e-20
WP_012951960.1|528503_529280_+	phage antirepressor KilAC domain-containing protein	NA	A0A0B5D0I2	Listeria_phage	99.2	9.6e-142
WP_012951959.1|529403_529937_+	hypothetical protein	NA	A0A059T5F0	Listeria_phage	87.9	1.5e-77
WP_012951958.1|529933_530149_+	hypothetical protein	NA	Q9T176	Listeria_phage	93.0	9.7e-28
WP_003722564.1|530257_530446_+	hypothetical protein	NA	Q9T175	Listeria_phage	82.3	1.8e-22
WP_157862701.1|530515_530656_+	hypothetical protein	NA	A0A059T7Q6	Listeria_phage	97.6	9.4e-16
WP_003734953.1|530751_530946_+	hypothetical protein	NA	A0A059T6E8	Listeria_phage	100.0	1.6e-29
WP_012951957.1|530942_531419_+	siphovirus Gp157 family protein	NA	A0A059T5F1	Listeria_phage	100.0	9.5e-76
WP_012951956.1|531424_532084_+	ERF family protein	NA	A8ASN3	Listeria_phage	94.1	5.3e-93
WP_012951955.1|532100_533084_+	phage replisome organizer N-terminal domain-containing protein	NA	A8ASN4	Listeria_phage	91.7	1.4e-166
WP_012951954.1|533080_533368_+	hypothetical protein	NA	A0A059T7V3	Listeria_phage	88.4	1.7e-40
WP_012951953.1|533364_533895_+	hypothetical protein	NA	A0A059T5F9	Listeria_phage	95.5	8.4e-97
WP_031645470.1|534030_534261_+	DUF3850 domain-containing protein	NA	A0A059T699	Listeria_phage	73.8	1.1e-18
WP_012951951.1|534282_534642_+	hypothetical protein	NA	A0A059T801	Listeria_phage	92.0	6.6e-45
WP_012951950.1|534638_535040_+	hypothetical protein	NA	A8ATZ6	Listeria_phage	75.9	1.4e-48
WP_012951949.1|535036_535516_+	single-stranded DNA-binding protein	NA	A8ATZ7	Listeria_phage	91.2	1.4e-74
WP_012951948.1|535537_535915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031645468.1|535942_536125_+	hypothetical protein	NA	A8ASP6	Listeria_phage	81.0	2.9e-17
WP_012951947.1|536069_536474_+	DUF1064 domain-containing protein	NA	A8ASP7	Listeria_phage	89.6	1.9e-61
WP_012951946.1|536477_536861_+	DUF2481 family protein	NA	A0A0B5CYS3	Listeria_phage	96.1	5.7e-63
WP_012951945.1|537001_537436_+	hypothetical protein	NA	A8AU03	Listeria_phage	97.2	1.6e-74
WP_012951944.1|537721_537949_+	hypothetical protein	NA	A8AU06	Listeria_phage	100.0	1.5e-34
WP_012951943.1|537988_538729_+	hypothetical protein	NA	A0A0B5CTX0	Listeria_phage	99.6	2.4e-134
WP_047934348.1|538694_540041_+|terminase	PBSX family phage terminase large subunit	terminase	A8ATU6	Listeria_phage	99.1	1.1e-262
WP_012951941.1|540055_541612_+	hypothetical protein	NA	A8ATU7	Listeria_phage	97.9	9.4e-298
WP_012951940.1|541616_542660_+	hypothetical protein	NA	A0A0B5D111	Listeria_phage	96.5	1.9e-193
WP_003744996.1|542755_543310_+	hypothetical protein	NA	A8ATU9	Listeria_phage	99.5	1.1e-88
WP_012951939.1|543332_544205_+	hypothetical protein	NA	A8ATV0	Listeria_phage	99.0	3.0e-160
WP_012951938.1|544218_544386_+	hypothetical protein	NA	A8ATV1	Listeria_phage	97.1	6.4e-11
WP_012951937.1|544386_544740_+	hypothetical protein	NA	A8ATV2	Listeria_phage	100.0	7.6e-62
WP_003733695.1|544739_545105_+	hypothetical protein	NA	A8ATV3	Listeria_phage	99.2	9.9e-65
WP_012951936.1|545094_545412_+	HK97 gp10 family phage protein	NA	A8ATV4	Listeria_phage	98.1	2.4e-51
WP_010991155.1|545408_545780_+	hypothetical protein	NA	A0A0B5CTY4	Listeria_phage	99.2	5.5e-63
WP_012951935.1|545784_546471_+	Ig domain-containing protein	NA	A0A0B5CYK8	Listeria_phage	97.4	2.6e-114
WP_012951934.1|546526_546958_+	hypothetical protein	NA	A8ATV7	Listeria_phage	95.8	3.2e-70
WP_074046934.1|546954_547266_+	hypothetical protein	NA	A0A0B5D116	Listeria_phage	96.7	1.3e-41
WP_012951932.1|547270_552070_+|tail	phage tail tape measure protein	tail	A8ATV9	Listeria_phage	89.1	0.0e+00
WP_012951931.1|552066_553635_+|tail	phage tail family protein	tail	A8ATW0	Listeria_phage	99.2	2.0e-303
WP_012951930.1|553647_555810_+|tail	phage tail protein	tail	A8ATW1	Listeria_phage	98.8	0.0e+00
WP_003722523.1|555848_556214_+	hypothetical protein	NA	Q9T1A0	Listeria_phage	100.0	7.4e-12
WP_003722522.1|556226_556508_+|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.4e-41
WP_012951929.1|556507_557353_+	M15 family metallopeptidase	NA	A0A059T7Y8	Listeria_phage	92.6	1.4e-133
WP_003722520.1|557393_558167_-	DUF3825 domain-containing protein	NA	A8ATW5	Listeria_phage	100.0	9.5e-150
WP_012951928.1|558441_558939_-	AP2 domain-containing protein	NA	A8ATW6	Listeria_phage	90.9	4.9e-83
WP_012951927.1|558950_559379_-	transcriptional regulator	NA	A8ATJ2	Listeria_phage	87.3	3.9e-28
WP_012951926.1|559380_559785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951925.1|559886_560096_-	hypothetical protein	NA	A0A059T7Z0	Listeria_phage	97.1	5.5e-28
WP_012951924.1|560536_560770_+	hypothetical protein	NA	A0A059T6E1	Listeria_phage	94.8	8.0e-36
>prophage 4
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	1074034	1082320	3038647		Synechococcus_phage(33.33%)	8	NA	NA
WP_003729814.1|1074034_1075327_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
WP_012951773.1|1075407_1076121_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	1.2e-42
WP_003722248.1|1076132_1076378_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003722247.1|1076381_1077065_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_012951772.1|1077057_1079277_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.1	5.0e-159
WP_003722245.1|1079261_1080689_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_012951771.1|1080707_1081757_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.5	4.6e-62
WP_003722243.1|1081753_1082320_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	7.0e-25
>prophage 5
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	1622998	1684184	3038647	tRNA,protease	Bacillus_virus(17.65%)	58	NA	NA
WP_003732816.1|1622998_1624705_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003723454.1|1624744_1626007_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010989733.1|1626020_1627163_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003732813.1|1627177_1627966_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003732812.1|1627979_1628738_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003723450.1|1628967_1629525_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003723449.1|1629524_1630253_-	UMP kinase	NA	NA	NA	NA	NA
WP_003723448.1|1630545_1630920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072217143.1|1630897_1632103_+	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	47.1	3.7e-92
WP_003723446.1|1632092_1633397_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	9.5e-134
WP_003723445.1|1633406_1633913_+	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	4.0e-56
WP_003723443.1|1634684_1635527_+	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_003723442.1|1635577_1635817_-	YneF family protein	NA	NA	NA	NA	NA
WP_003732809.1|1636037_1638032_-	transketolase	NA	NA	NA	NA	NA
WP_003723440.1|1638178_1638406_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003723439.1|1638497_1638827_-	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723438.1|1638984_1639599_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003723437.1|1639628_1640150_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012951579.1|1640193_1641489_-	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	61.9	2.8e-146
WP_003723435.1|1641632_1642967_-	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003719570.1|1643037_1643406_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010989728.1|1643608_1644835_-	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003733804.1|1644827_1646051_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003719566.1|1646161_1646395_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_012951578.1|1646517_1647435_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003723738.1|1647560_1649237_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_012951577.1|1649469_1650168_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	9.9e-13
WP_012951576.1|1650380_1652249_+	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_012951575.1|1652282_1654079_-	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_012951574.1|1654410_1656144_-	LapB repeat-containing protein	NA	NA	NA	NA	NA
WP_009913867.1|1656470_1656938_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_010989723.1|1657020_1659480_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	4.7e-102
WP_003723731.1|1659476_1661444_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_003732802.1|1661624_1662032_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_003724132.1|1662189_1662786_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_009932949.1|1662827_1663700_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003724130.1|1663702_1664014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951573.1|1664036_1664456_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003726695.1|1664558_1665338_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003732800.1|1665358_1666768_-|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	28.7	3.7e-43
WP_003724001.1|1666781_1667321_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_009911635.1|1667341_1668244_-	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_009924616.1|1668526_1669831_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_012951572.1|1669893_1671972_-	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	3.2e-107
WP_003723892.1|1672243_1673104_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003723891.1|1673237_1674023_-	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723890.1|1674019_1674883_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003723889.1|1674892_1675435_-	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_009924619.1|1675536_1676106_-	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723887.1|1676140_1676707_-	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003723886.1|1676825_1678085_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003723884.1|1678269_1679553_-	trigger factor	NA	NA	NA	NA	NA
WP_003732796.1|1679667_1680606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003732795.1|1680867_1681533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010989719.1|1681550_1682084_-|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003727524.1|1682202_1682418_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003723563.1|1682568_1682964_+	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003723562.1|1683044_1684184_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 6
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	1703326	1747691	3038647	capsid,holin,integrase,tail,portal,terminase,protease	Listeria_phage(92.0%)	62	1703040:1703061	1747787:1747808
1703040:1703061	attL	ATATTACGTCCTGAGAGGGATT	NA	NA	NA	NA
WP_012951563.1|1703326_1703560_-	hypothetical protein	NA	A8ATC5	Listeria_phage	98.7	1.6e-36
WP_012951561.1|1704000_1704183_+	hypothetical protein	NA	A0A059T7Z0	Listeria_phage	96.6	2.3e-22
WP_012951560.1|1704407_1705406_-	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	44.8	3.9e-71
WP_012951559.1|1705509_1706355_-	M15 family metallopeptidase	NA	A0A059T7Y8	Listeria_phage	83.7	5.4e-130
WP_012951558.1|1706354_1706612_-|holin	phage holin	holin	A8ATB7	Listeria_phage	69.0	3.2e-25
WP_012951557.1|1706611_1706914_-	hypothetical protein	NA	A0A059T5E6	Listeria_phage	93.0	1.7e-38
WP_031644619.1|1706961_1708056_-	hypothetical protein	NA	A0A059T7R4	Listeria_phage	87.9	2.2e-184
WP_012951555.1|1708045_1710340_-|tail	phage tail protein	tail	A0A059T7Y6	Listeria_phage	94.0	0.0e+00
WP_012951554.1|1710352_1712002_-|tail	phage tail family protein	tail	A0A059T682	Listeria_phage	99.1	0.0e+00
WP_012951553.1|1711989_1716921_-|tail	phage tail tape measure protein	tail	A0A059T5F4	Listeria_phage	95.1	0.0e+00
WP_009914372.1|1716924_1717086_-	hypothetical protein	NA	A0A059T6F4	Listeria_phage	97.9	2.1e-19
WP_012951552.1|1717136_1717469_-	hypothetical protein	NA	A8ATA5	Listeria_phage	96.4	2.8e-50
WP_012951551.1|1717539_1718127_-|tail	phage tail protein	tail	A0A059T7Y4	Listeria_phage	99.0	1.7e-106
WP_009931623.1|1718147_1718531_-	hypothetical protein	NA	A0A059T681	Listeria_phage	96.1	6.1e-65
WP_012951550.1|1718527_1718929_-	hypothetical protein	NA	A0A059T5F3	Listeria_phage	100.0	2.1e-68
WP_009934006.1|1718925_1719291_-	hypothetical protein	NA	A0A059T6F2	Listeria_phage	96.7	1.6e-62
WP_012951549.1|1719274_1719574_-	hypothetical protein	NA	A8ATA0	Listeria_phage	97.0	8.4e-46
WP_012951548.1|1719583_1719754_-	hypothetical protein	NA	A0A059T7Y2	Listeria_phage	100.0	6.3e-22
WP_012951547.1|1719760_1720912_-|capsid	phage major capsid protein	capsid	A0A059T678	Listeria_phage	99.5	3.1e-213
WP_012951546.1|1720938_1721655_-|protease	Clp protease ClpP	protease	A0A1S5SFF8	Streptococcus_phage	59.0	9.3e-67
WP_012951545.1|1721651_1722782_-|portal	phage portal protein	portal	A0A059T6F0	Listeria_phage	99.5	2.8e-214
WP_009917707.1|1722832_1723222_+	DUF2513 domain-containing protein	NA	A0A1Q1PVT8	Staphylococcus_phage	39.8	3.7e-17
WP_012951544.1|1723231_1724875_-|terminase	terminase large subunit	terminase	A0A059T7Q8	Listeria_phage	99.3	0.0e+00
WP_012951543.1|1724871_1725228_-|terminase	P27 family phage terminase small subunit	terminase	A0A059T7Y1	Listeria_phage	98.0	2.0e-46
WP_009931610.1|1725277_1725592_-	HNH endonuclease	NA	A8ATF8	Listeria_phage	98.1	5.0e-57
WP_014930130.1|1725591_1725918_-	hypothetical protein	NA	A0A059T5G5	Listeria_phage	100.0	2.2e-55
WP_012951542.1|1726386_1727130_-	DUF559 domain-containing protein	NA	NA	NA	NA	NA
WP_009917712.1|1727227_1727653_-	DUF722 domain-containing protein	NA	A0A059T6H4	Listeria_phage	100.0	8.0e-74
WP_012951541.1|1727694_1727844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003731657.1|1727872_1728142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951540.1|1728138_1728678_-	DUF3310 domain-containing protein	NA	A8ATF5	Listeria_phage	77.1	9.2e-75
WP_003731659.1|1729125_1729338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951539.1|1729339_1729657_-	VRR-NUC domain-containing protein	NA	A8ATF4	Listeria_phage	89.3	7.3e-48
WP_012951538.1|1729990_1732279_-	primase	NA	R4IBW2	Listeria_phage	95.4	0.0e+00
WP_009918373.1|1732301_1732784_-	DUF669 domain-containing protein	NA	A8ATF2	Listeria_phage	98.8	5.5e-87
WP_074471730.1|1732808_1734050_-	DEAD/DEAH box helicase	NA	A8ATF1	Listeria_phage	96.1	1.2e-213
WP_012951536.1|1734128_1734818_-	AAA family ATPase	NA	R4IDY8	Listeria_phage	96.9	3.1e-128
WP_003731665.1|1734837_1735317_-	siphovirus Gp157 family protein	NA	R4IBM0	Listeria_phage	76.7	7.6e-57
WP_012951535.1|1735318_1735702_-	hypothetical protein	NA	A8ATE8	Listeria_phage	92.9	5.3e-61
WP_003731667.1|1735698_1735872_-	hypothetical protein	NA	Q8W5W3	Listeria_phage	100.0	6.8e-24
WP_003731668.1|1735874_1736138_-	hypothetical protein	NA	Q8W5W6	Listeria_phage	67.1	8.8e-23
WP_012951534.1|1736340_1736532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951533.1|1736501_1736720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951532.1|1736716_1736950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951531.1|1736968_1737598_-	hypothetical protein	NA	A0A191KBJ8	Streptococcus_virus	58.4	1.1e-66
WP_012951530.1|1737598_1738078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951529.1|1738270_1738714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951528.1|1738716_1738950_-	DUF1642 domain-containing protein	NA	B6D7L5	Listeria_phage	55.6	6.8e-11
WP_012951527.1|1738946_1739627_-	hypothetical protein	NA	A8ATD7	Listeria_phage	95.6	9.0e-120
WP_012951526.1|1739639_1740584_-|integrase	site-specific integrase	integrase	A8ATD6	Listeria_phage	97.8	1.1e-176
WP_012951525.1|1740594_1741308_-	SAM-dependent DNA methyltransferase	NA	A8ATD5	Listeria_phage	97.9	4.5e-130
WP_012951524.1|1741304_1741769_-	class I SAM-dependent methyltransferase	NA	A0A059T693	Listeria_phage	94.8	2.9e-85
WP_012951522.1|1742585_1742828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951521.1|1743193_1743346_-	hypothetical protein	NA	A8ATD4	Listeria_phage	70.0	3.6e-13
WP_003730997.1|1743580_1743766_-	hypothetical protein	NA	A8ATD3	Listeria_phage	98.4	3.7e-28
WP_003730996.1|1743768_1744011_-	hypothetical protein	NA	A8ATD2	Listeria_phage	93.8	3.9e-41
WP_012951520.1|1744032_1744224_-	helix-turn-helix transcriptional regulator	NA	Q8W5X9	Listeria_phage	84.1	1.6e-21
WP_003730994.1|1744290_1744494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012951519.1|1744894_1745218_+	helix-turn-helix transcriptional regulator	NA	R4IDX0	Listeria_phage	75.7	6.3e-39
WP_012951518.1|1745234_1745687_+	ImmA/IrrE family metallo-endopeptidase	NA	R4IBK9	Listeria_phage	91.3	1.1e-78
WP_012951517.1|1745738_1746395_+	DUF4352 domain-containing protein	NA	NA	NA	NA	NA
WP_012951516.1|1746536_1747691_+|integrase	site-specific integrase	integrase	A0A059T688	Listeria_phage	95.8	1.6e-209
1747787:1747808	attR	ATATTACGTCCTGAGAGGGATT	NA	NA	NA	NA
>prophage 7
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	1869221	1878774	3038647		Hokovirus(28.57%)	9	NA	NA
WP_012951455.1|1869221_1871135_-	site-specific DNA-methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	36.9	1.3e-59
WP_012951454.1|1871352_1872909_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	3.0e-17
WP_003730540.1|1873037_1873442_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_012951453.1|1873501_1873810_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003727000.1|1873822_1874647_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_003721509.1|1874658_1876149_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_010989660.1|1876357_1877371_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	7.9e-11
WP_003732709.1|1877385_1878369_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	34.6	4.1e-12
WP_003721506.1|1878390_1878774_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
>prophage 8
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	2322436	2357743	3038647	head,holin,integrase,protease,tail,portal,terminase,capsid	Listeria_phage(54.84%)	45	2343644:2343658	2364864:2364878
WP_003722835.1|2322436_2323300_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_012951337.1|2324739_2325585_-	M15 family metallopeptidase	NA	A0A059T7Y8	Listeria_phage	93.3	4.8e-139
WP_003722522.1|2325584_2325866_-|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.4e-41
WP_003722523.1|2325878_2326244_-	hypothetical protein	NA	Q9T1A0	Listeria_phage	100.0	7.4e-12
WP_030142763.1|2326282_2327344_-	hypothetical protein	NA	A0A059T7R4	Listeria_phage	51.3	1.9e-95
WP_012951335.1|2327336_2329628_-|tail	phage tail protein	tail	A0A059T7Y6	Listeria_phage	37.9	9.8e-134
WP_012951334.1|2329633_2331877_-|tail	phage tail family protein	tail	A0A059T682	Listeria_phage	29.4	1.6e-56
WP_012951333.1|2331869_2336069_-|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	33.0	1.2e-12
WP_012951331.1|2336265_2336613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951330.1|2336702_2337278_-|tail	major tail protein	tail	M1PRQ7	Streptococcus_phage	42.4	1.2e-32
WP_012951329.1|2337298_2337697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951328.1|2337699_2338065_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_012951327.1|2338058_2338379_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_012951326.1|2338348_2338687_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JB77	uncultured_Caudovirales_phage	37.8	8.1e-13
WP_012951325.1|2338735_2339905_-|capsid	phage major capsid protein	capsid	A0A060AI54	Enterococcus_phage	38.1	2.1e-44
WP_012951324.1|2339968_2340535_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1D6Z2A7	Staphylococcus_phage	52.2	1.0e-44
WP_012951323.1|2340531_2341767_-|portal	phage portal protein	portal	A0A2H4JAR2	uncultured_Caudovirales_phage	42.1	3.6e-82
WP_023552290.1|2341769_2341970_-	DUF1056 family protein	NA	NA	NA	NA	NA
WP_012951322.1|2341976_2343728_-|terminase	terminase large subunit	terminase	A0A2H4JCI4	uncultured_Caudovirales_phage	50.7	4.1e-156
2343644:2343658	attL	ATCGACAATATAAAT	NA	NA	NA	NA
WP_012951321.1|2343696_2344224_-|terminase	phage terminase small subunit P27 family	terminase	J7KC46	Streptococcus_phage	46.7	6.1e-31
WP_049961585.1|2344318_2344681_-	HNH endonuclease	NA	A0A075M5R4	Enterococcus_phage	44.1	3.5e-14
WP_102578311.1|2344677_2344953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951318.1|2344978_2345206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951317.1|2345487_2346030_-|integrase	tyrosine-type recombinase/integrase	integrase	H0USV4	Bacillus_phage	53.3	4.3e-48
WP_012951316.1|2346026_2346545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951315.1|2346605_2346797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951314.1|2346850_2347330_-	single-stranded DNA-binding protein	NA	A8ASP5	Listeria_phage	77.5	2.9e-64
WP_012951313.1|2347329_2347911_-	DUF3310 domain-containing protein	NA	A0A059T5J6	Listeria_phage	76.3	5.2e-76
WP_012951312.1|2347910_2348159_-	DUF3850 domain-containing protein	NA	A0A059T699	Listeria_phage	85.3	6.6e-28
WP_012951311.1|2348180_2348564_-	hypothetical protein	NA	A8ATZ3	Listeria_phage	78.7	4.9e-46
WP_012951310.1|2348560_2348776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003762551.1|2348772_2349453_-	hypothetical protein	NA	A8ATD7	Listeria_phage	90.7	7.9e-116
WP_012951309.1|2349465_2350410_-|integrase	site-specific integrase	integrase	A8ATD6	Listeria_phage	95.9	1.2e-173
WP_012951308.1|2350420_2351134_-	SAM-dependent DNA methyltransferase	NA	A8ATD5	Listeria_phage	97.9	4.5e-130
WP_012951307.1|2351130_2351595_-	class I SAM-dependent methyltransferase	NA	A0A059T693	Listeria_phage	96.8	5.3e-87
WP_012951305.1|2352141_2352318_-	hypothetical protein	NA	A8ATL8	Listeria_phage	69.0	1.7e-14
WP_012951304.1|2352314_2352731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951303.1|2352727_2353084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012951302.1|2353085_2354000_-	conserved phage C-terminal domain-containing protein	NA	A0A1W6JNI1	Staphylococcus_phage	52.3	1.0e-54
WP_012951301.1|2354172_2354499_-	DUF771 domain-containing protein	NA	A0A2H4J474	uncultured_Caudovirales_phage	41.1	4.9e-15
WP_012951300.1|2354597_2354789_-	helix-turn-helix transcriptional regulator	NA	Q0H243	Geobacillus_phage	57.6	6.2e-10
WP_012951299.1|2354962_2355289_+	helix-turn-helix transcriptional regulator	NA	Q0H244	Geobacillus_phage	47.1	1.6e-13
WP_012951298.1|2355301_2355802_+	hypothetical protein	NA	A0A1S7FYX8	Listeria_phage	31.9	1.4e-13
WP_012951297.1|2355856_2356570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012951296.1|2356591_2357743_+|integrase	site-specific integrase	integrase	A8ATX2	Listeria_phage	46.3	3.4e-87
2364864:2364878	attR	ATTTATATTGTCGAT	NA	NA	NA	NA
>prophage 9
NZ_CP019167	Listeria monocytogenes strain HPB5622 chromosome, complete genome	3038647	2930738	2940770	3038647		Tupanvirus(33.33%)	7	NA	NA
WP_012951084.1|2930738_2932892_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.1	6.7e-44
WP_003732117.1|2932915_2934688_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.1	6.3e-80
WP_003722118.1|2934848_2936315_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
WP_012951083.1|2936602_2937133_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	49.3	3.4e-29
WP_012951082.1|2937190_2938801_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.5	1.2e-45
WP_072215787.1|2938979_2939288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009924391.1|2939315_2940770_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
>prophage 1
NZ_CP019168	Listeria monocytogenes strain HPB5622 plasmid pLM5578, complete sequence	77105	28737	37820	77105	transposase	Streptococcus_phage(33.33%)	9	NA	NA
WP_003728509.1|28737_28974_-	helix-turn-helix transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	53.4	6.7e-14
WP_003731679.1|28936_29215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003728510.1|29334_29562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003728511.1|29551_30160_-	recombinase family protein	NA	A0A1W5LU24	Ralstonia_phage	42.9	1.0e-21
WP_012952127.1|30535_31081_-	YdhK family protein	NA	NA	NA	NA	NA
WP_003728466.1|31572_33708_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	64.5	1.6e-247
WP_003728467.1|33707_34067_-	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	E4ZFI8	Streptococcus_phage	50.0	3.1e-26
WP_003728468.1|34346_34901_+	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	53.4	7.0e-38
WP_003728469.1|34904_37820_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	36.7	1.9e-174
