The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	21554	33292	6987670		uncultured_Caudovirales_phage(55.56%)	17	NA	NA
WP_075791042.1|21554_22868_+	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	33.3	5.0e-42
WP_075791043.1|22877_23216_+	DUF190 domain-containing protein	NA	NA	NA	NA	NA
WP_075791044.1|23229_23616_+	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	58.5	9.3e-29
WP_075791045.1|23627_23945_+	DUF190 domain-containing protein	NA	NA	NA	NA	NA
WP_075791046.1|23955_24387_+	EamA family transporter	NA	NA	NA	NA	NA
WP_075791047.1|24420_24795_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_075796160.1|24884_25214_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	54.5	1.2e-24
WP_075791048.1|25319_25742_-	EamA family transporter	NA	NA	NA	NA	NA
WP_075791049.1|25860_26577_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.7	5.1e-89
WP_075791050.1|26573_26996_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	67.4	2.3e-49
WP_075791051.1|27009_28290_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	76.3	5.0e-180
WP_075791052.1|28376_28856_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	53.2	8.5e-40
WP_075791053.1|28941_29286_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_075791054.1|29558_30575_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4SNR3	Cyanophage	39.0	5.1e-50
WP_075791055.1|30631_31618_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_075791056.1|31614_32475_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_075791057.1|32467_33292_+	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	32.1	3.9e-16
>prophage 2
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	57231	127443	6987670	transposase,integrase	uncultured_Caudovirales_phage(30.0%)	60	83555:83572	133628:133645
WP_083684450.1|57231_58248_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_075791078.1|58394_58991_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_051306791.1|59044_60298_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_075791079.1|60363_61758_-	beta-propeller fold lactonase family protein	NA	NA	NA	NA	NA
WP_051306793.1|61761_62205_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	44.8	3.0e-07
WP_075791080.1|62210_63008_-	anti-sigma factor	NA	NA	NA	NA	NA
WP_075791081.1|63004_63511_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_075791082.1|63539_63968_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_036216428.1|64049_64973_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_075791083.1|65079_66096_+	putative sulfate exporter family transporter	NA	NA	NA	NA	NA
WP_075791084.1|66771_68052_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	76.1	1.6e-178
WP_075791085.1|68126_68606_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	51.9	1.9e-39
WP_075796165.1|68642_68987_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_075796166.1|69048_69561_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	40.6	1.6e-23
WP_075791086.1|69794_71198_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_075791087.1|71249_72464_+	MFS transporter	NA	NA	NA	NA	NA
WP_075791088.1|72500_72818_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA	NA
WP_169926782.1|73513_74638_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_156895508.1|74841_75378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895509.1|75370_77764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895510.1|77856_79551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895511.1|79811_80885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075791091.1|81027_81864_-	thymidylate synthase	NA	E5DV96	Deep-sea_thermophilic_phage	65.8	8.8e-109
WP_075791092.1|82640_83735_-	threonine aldolase	NA	NA	NA	NA	NA
83555:83572	attL	CGAGCAGTTCGGCCACGC	NA	NA	NA	NA
WP_075791093.1|83887_85900_-	Cache 3/Cache 2 fusion domain-containing protein	NA	NA	NA	NA	NA
WP_075791094.1|86053_87883_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.6	6.1e-62
WP_075791095.1|87924_88992_-	carotenoid 1,2-hydratase	NA	NA	NA	NA	NA
WP_075791096.1|88991_91541_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_075791097.1|91528_91963_-	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
WP_075791098.1|91976_93386_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_075791099.1|93378_93777_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_075791100.1|93780_94392_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA	NA
WP_075796167.1|94493_95840_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_075791101.1|95829_96138_-	DUF962 domain-containing protein	NA	NA	NA	NA	NA
WP_075791102.1|96177_96987_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_075791103.1|96988_98125_-	PLP-dependent transferase	NA	NA	NA	NA	NA
WP_075791104.1|98315_98771_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_075791105.1|98778_101019_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_075791106.1|101195_102290_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	46.4	2.8e-86
WP_083685630.1|102440_103847_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_075796168.1|103930_105592_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_075791108.1|106002_107709_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_075791109.1|107831_108482_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_075791110.1|108478_108853_+	Hpt domain-containing protein	NA	NA	NA	NA	NA
WP_036231758.1|109147_109351_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	77.6	6.8e-23
WP_075791111.1|109434_110349_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_075791112.1|110520_112110_+	malate synthase A	NA	NA	NA	NA	NA
WP_075791113.1|112277_113075_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_075791114.1|113098_113884_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_075791115.1|113909_114350_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.0	5.2e-36
WP_075791116.1|115098_116877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169926783.1|117216_118089_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_075791118.1|118666_119653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895495.1|119912_121134_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.6	3.9e-129
WP_156895512.1|121190_121628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156895513.1|122035_122185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075791119.1|122529_122940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075791120.1|122932_125008_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_156895514.1|125009_126659_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_169926784.1|126720_127443_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
133628:133645	attR	GCGTGGCCGAACTGCTCG	NA	NA	NA	NA
>prophage 3
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	1159591	1191349	6987670	transposase	Acidithiobacillus_phage(33.33%)	25	NA	NA
WP_075791334.1|1159591_1161121_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	49.6	3.3e-130
WP_075791880.1|1161210_1161963_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	57.7	8.6e-71
WP_083684740.1|1161981_1163148_+	MFS transporter	NA	NA	NA	NA	NA
WP_075791882.1|1163925_1165290_+	porin	NA	NA	NA	NA	NA
WP_075791884.1|1166212_1166494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075791886.1|1167481_1168915_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_075791887.1|1169387_1170338_-	PHB depolymerase family esterase	NA	NA	NA	NA	NA
WP_075791888.1|1170443_1170749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169926779.1|1170992_1171340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075791890.1|1171676_1171958_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_075791891.1|1172566_1173562_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_075791892.1|1173591_1174590_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_075791893.1|1174614_1175724_-	porin	NA	NA	NA	NA	NA
WP_156895568.1|1175834_1177715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075791895.1|1177711_1178308_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_156895569.1|1178961_1180111_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	47.9	3.1e-64
WP_075791898.1|1180436_1180733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895493.1|1181260_1182459_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	90.1	5.6e-141
WP_156895539.1|1182871_1183967_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	38.2	2.2e-38
WP_156895570.1|1184354_1184696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083684746.1|1184927_1186646_+	DUF1800 domain-containing protein	NA	NA	NA	NA	NA
WP_075791899.1|1186657_1188043_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_075796250.1|1188257_1189253_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_075791900.1|1189360_1189777_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_075791135.1|1190098_1191349_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	46.5	1.2e-48
>prophage 4
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	1282695	1287022	6987670		uncultured_Caudovirales_phage(83.33%)	7	NA	NA
WP_052233875.1|1282695_1283208_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	40.0	3.5e-23
WP_075796259.1|1283269_1283614_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_075791958.1|1283650_1284130_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	51.9	1.1e-39
WP_052233741.1|1284204_1285485_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	76.3	7.3e-179
WP_179966256.1|1285498_1285933_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	67.2	1.0e-47
WP_052233740.1|1285929_1286646_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	71.0	4.6e-90
WP_052233873.1|1286695_1287022_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	59.6	1.8e-25
>prophage 5
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	3038920	3047235	6987670	tRNA	Bacillus_virus(33.33%)	8	NA	NA
WP_075793209.1|3038920_3040723_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.0	1.3e-69
WP_075793210.1|3040872_3041322_-	GatB/YqeY domain-containing protein	NA	G3MAQ0	Bacillus_virus	31.8	2.7e-11
WP_005665410.1|3041451_3041664_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_075793211.1|3041770_3042982_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_075793212.1|3043038_3044019_-	DNA-binding protein YbiB	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	28.5	7.3e-22
WP_075796389.1|3044131_3045190_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	46.8	8.3e-80
WP_075793213.1|3045372_3046410_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	53.7	9.0e-95
WP_075793214.1|3046428_3047235_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.7	1.1e-28
>prophage 6
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	4234772	4286269	6987670	holin,transposase,protease,integrase	Burkholderia_virus(10.0%)	53	4226711:4226726	4260016:4260031
4226711:4226726	attL	CGTGCTGCTGCTGGCC	NA	NA	NA	NA
WP_156895493.1|4234772_4235971_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	90.1	5.6e-141
WP_156895700.1|4236495_4236981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169926834.1|4236977_4237610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895702.1|4237711_4238878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895703.1|4238874_4240356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075794108.1|4240352_4241456_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_075794109.1|4241977_4242448_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	45.8	4.3e-20
WP_036231132.1|4242537_4243149_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_075794110.1|4243239_4244001_-	cytochrome c1	NA	NA	NA	NA	NA
WP_075794111.1|4244053_4245469_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_179966291.1|4246354_4246789_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_075794113.1|4246805_4247957_+	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	33.0	7.6e-18
WP_075794114.1|4247972_4248659_+	DUF2461 domain-containing protein	NA	NA	NA	NA	NA
WP_075794115.1|4248671_4249043_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_075794116.1|4249051_4250104_-	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_075794117.1|4250115_4250571_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_036231111.1|4250702_4251176_-	protein-export chaperone SecB	NA	NA	NA	NA	NA
WP_075794118.1|4251311_4251581_-	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	44.0	3.9e-10
WP_075794119.1|4251598_4252003_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_075794120.1|4252091_4252838_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_156895872.1|4252904_4254317_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_075794121.1|4254345_4255842_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	25.4	8.9e-19
WP_075794122.1|4255838_4256594_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_075794123.1|4256760_4257216_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA	NA
WP_075794124.1|4257229_4257730_+	type II secretion system minor pseudopilin GspH	NA	NA	NA	NA	NA
WP_075796486.1|4257740_4258130_+	type II secretion system minor pseudopilin GspI	NA	NA	NA	NA	NA
WP_075794125.1|4258126_4258810_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_075794126.1|4258806_4259784_+	type II secretion system minor pseudopilin GspK	NA	NA	NA	NA	NA
WP_075794127.1|4259863_4261075_+	general secretion pathway protein GspL	NA	NA	NA	NA	NA
4260016:4260031	attR	CGTGCTGCTGCTGGCC	NA	NA	NA	NA
WP_075794128.1|4261071_4261590_+	type II secretion system protein M	NA	NA	NA	NA	NA
WP_075794129.1|4261586_4262360_+	type II secretion system protein N	NA	NA	NA	NA	NA
WP_075794130.1|4262359_4264720_+	type II secretion system secretin GspD	NA	A7BJX1	Enterobacteria_phage	29.6	1.1e-26
WP_075794131.1|4264726_4266151_+	type II secretion system ATPase GspE	NA	NA	NA	NA	NA
WP_075794132.1|4266154_4267375_+	type II secretion system inner membrane protein GspF	NA	NA	NA	NA	NA
WP_075794133.1|4267386_4268133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075794134.1|4268146_4268878_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_075794136.1|4269121_4269502_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_075794137.1|4269522_4269720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075794138.1|4269747_4271082_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.1	6.0e-43
WP_075794139.1|4271119_4271656_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_075794140.1|4271763_4273089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036231049.1|4273317_4273770_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_075794141.1|4273959_4275003_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_075794142.1|4275126_4276074_-	tyrosine recombinase XerC	NA	G1JX48	Mycobacterium_phage	28.3	1.9e-11
WP_075794143.1|4276075_4276741_-	DUF484 family protein	NA	NA	NA	NA	NA
WP_075794144.1|4276927_4278004_-	porin	NA	NA	NA	NA	NA
WP_075794145.1|4278471_4280055_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_075794146.1|4280207_4281071_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_075794147.1|4281081_4281945_-	lipid A biosynthesis acyltransferase	NA	NA	NA	NA	NA
WP_075794148.1|4281941_4282793_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_075794149.1|4282973_4284143_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	59.5	1.1e-117
WP_179966236.1|4284398_4285817_+	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	30.0	2.9e-43
WP_075794151.1|4285915_4286269_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 7
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	4884227	4896360	6987670	tRNA	Dickeya_phage(16.67%)	8	NA	NA
WP_075794571.1|4884227_4888004_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	2.5e-09
WP_075794572.1|4888330_4888570_+	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_075794573.1|4888768_4889716_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	41.7	9.0e-09
WP_075794574.1|4889727_4890255_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.1	1.8e-19
WP_075794575.1|4890507_4891623_+	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	39.1	3.5e-12
WP_075794576.1|4891630_4892812_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	40.1	3.0e-30
WP_075794577.1|4892934_4893399_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_075794578.1|4893678_4896360_+	DNA topoisomerase III	NA	A0A2P1ELA0	Moumouvirus	25.7	9.7e-24
>prophage 8
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	6987670	5707568	5738142	6987670	plate,capsid,terminase,head,tail,portal	Acidithiobacillus_phage(30.77%)	37	NA	NA
WP_169926844.1|5707568_5708192_-	DUF2313 domain-containing protein	NA	Q8W614	Enterobacteria_phage	35.4	1.7e-24
WP_075795190.1|5708182_5709244_-|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	36.6	1.0e-40
WP_083685471.1|5709236_5709704_-	phage GP46 family protein	NA	Q8HAB8	Salmonella_phage	56.1	9.2e-31
WP_075795191.1|5709718_5710357_-|plate	phage baseplate assembly protein	plate	Q8SBG6	Shigella_phage	41.2	4.8e-30
WP_075795192.1|5710367_5711663_-	hypothetical protein	NA	B5TK72	Pseudomonas_phage	39.0	2.8e-69
WP_075795193.1|5711664_5712927_-	DNA circularization N-terminal domain-containing protein	NA	Q8W619	Enterobacteria_phage	33.4	7.5e-43
WP_075795194.1|5712942_5714751_-|tail	phage tail tape measure protein	tail	A0A0U2BXT9	Paracoccus_phage	24.4	7.0e-10
WP_075795195.1|5714828_5715209_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_042549277.1|5715205_5715574_-|tail	phage tail tube protein	tail	Q8W622	Enterobacteria_phage	42.5	2.0e-20
WP_075795196.1|5715587_5717156_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B5TK67	Pseudomonas_phage	48.5	2.3e-126
WP_075795197.1|5717152_5717443_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_075795198.1|5717526_5718210_-	hypothetical protein	NA	Q8SBH4	Shigella_phage	36.6	1.6e-23
WP_156895755.1|5718209_5718647_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075795200.1|5718655_5719045_-|head,tail	head-tail adaptor protein	head,tail	U5P0R0	Shigella_phage	34.1	5.7e-10
WP_075795201.1|5719041_5719683_-|head,tail	phage head-tail connector protein	head,tail	NA	NA	NA	NA
WP_075795202.1|5719682_5720252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075795203.1|5720291_5720747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075795204.1|5720777_5722163_-|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_075796602.1|5722287_5723211_-	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	33.2	2.2e-28
WP_075795205.1|5723200_5724493_-|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	41.5	1.9e-78
WP_075795206.1|5724492_5726205_-|terminase	terminase large subunit	terminase	A0A141GEV8	Brucella_phage	53.0	4.9e-154
WP_075795207.1|5726213_5726675_-|terminase	phage terminase small subunit P27 family	terminase	Q8W632	Enterobacteria_phage	28.7	5.3e-07
WP_075795208.1|5726795_5727194_-	HNH endonuclease	NA	Q8W6N0	Burkholderia_virus	54.8	1.9e-32
WP_075795209.1|5727302_5727500_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075795210.1|5727516_5727990_+	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	81.7	2.0e-25
WP_156895756.1|5727971_5729234_-	ParB N-terminal domain-containing protein	NA	K4HZA5	Acidithiobacillus_phage	68.2	2.0e-160
WP_075795212.1|5729426_5729807_-	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
WP_075795213.1|5729799_5730012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_179966300.1|5730013_5730526_-	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	74.0	2.7e-60
WP_083685844.1|5730798_5733015_-	AAA family ATPase	NA	A0A1B2LRQ1	Wolbachia_phage	32.8	2.1e-104
WP_075795214.1|5732984_5733740_-	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	59.4	1.2e-80
WP_075795215.1|5733739_5734162_-	hypothetical protein	NA	K4I3X7	Acidithiobacillus_phage	47.2	6.1e-26
WP_075795216.1|5734158_5735832_-	DEAD/DEAH box helicase	NA	A0A0A1CM43	Vibrio_phage	28.4	5.3e-36
WP_075795217.1|5735847_5736453_-	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	60.6	4.1e-63
WP_075795218.1|5736455_5737355_-	ATP-binding protein	NA	K4HZX9	Acidithiobacillus_phage	67.7	7.0e-104
WP_075795219.1|5737351_5737666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075795220.1|5737671_5738142_-	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	44.3	1.3e-29
>prophage 1
NZ_CP019036	Massilia putida strain 6NM-7 plasmid unnamed1, complete sequence	78166	12484	70910	78166	tRNA,transposase,integrase	Shigella_phage(25.0%)	58	18425:18446	72734:72755
WP_075790585.1|12484_13288_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	34.2	7.9e-22
WP_075790649.1|13390_14680_-	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA	NA
WP_075790586.1|14762_14939_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_075790587.1|14944_15220_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
WP_075790588.1|15358_16354_-	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_075790650.1|16758_17904_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_156895464.1|18095_18392_+	hypothetical protein	NA	NA	NA	NA	NA
18425:18446	attL	GCCGTTTTCGCGTCCGCGAAAT	NA	NA	NA	NA
WP_075790590.1|18445_20383_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_075790591.1|20451_22332_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_075790592.1|22351_23407_-	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA	NA
WP_075790593.1|23387_24701_-	type IV secretion system protein VirB10	NA	NA	NA	NA	NA
WP_075790594.1|24697_25528_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA	NA
WP_156895465.1|25524_26415_-	type IV secretion system protein	NA	NA	NA	NA	NA
WP_169926765.1|26457_27315_-	type IV secretion system protein	NA	NA	NA	NA	NA
WP_083684272.1|27457_28108_-	P-type DNA transfer protein VirB5	NA	NA	NA	NA	NA
WP_075790597.1|28196_30587_-	transporter	NA	NA	NA	NA	NA
WP_075790598.1|30567_30945_-	VirB3 family type IV secretion system protein	NA	NA	NA	NA	NA
WP_075790599.1|30941_31232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895476.1|31252_31882_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_075790601.1|31893_32199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083684275.1|32436_33465_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_075790652.1|33549_34530_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_075790603.1|34718_35468_-	autoinducer binding domain-containing protein	NA	NA	NA	NA	NA
WP_075790604.1|35777_36056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895466.1|36277_36607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075790606.1|36697_37354_+	OmpW family protein	NA	NA	NA	NA	NA
WP_075790607.1|37526_37760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156895467.1|37965_39288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169926766.1|39836_40634_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_075790609.1|40637_41783_+	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHY8	Gordonia_phage	30.6	1.1e-05
WP_083684278.1|42054_42318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790610.1|42325_42691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790611.1|42919_43069_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_075790612.1|43372_43744_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_075790613.1|43737_44679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156895468.1|44668_45241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790615.1|45237_45621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790616.1|45617_46778_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_075790617.1|46770_47433_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.6	3.1e-32
WP_075790618.1|47472_47973_+	protein-disulfide reductase DsbD N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_075790619.1|48255_48831_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.3	4.0e-44
WP_075790620.1|48811_50470_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_075790621.1|50459_51431_+	ExeA family protein	NA	NA	NA	NA	NA
WP_075790622.1|51439_52144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790623.1|52261_52456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790624.1|52452_53337_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.8	2.4e-48
WP_156895470.1|53374_54154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895471.1|54888_55197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790627.1|55305_56505_-	MFS transporter	NA	NA	NA	NA	NA
WP_083684261.1|56501_57905_-	bifunctional DedA family/phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_075790628.1|57906_59265_-	sensor histidine kinase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_169926767.1|60067_61432_+	TolC family protein	NA	NA	NA	NA	NA
WP_075790657.1|62482_65584_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.1	7.9e-62
WP_075790630.1|65965_66523_-	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	62.4	8.0e-58
WP_075790631.1|66531_67176_-	cation transporter	NA	NA	NA	NA	NA
WP_075790632.1|67172_67556_-	DUF86 domain-containing protein	NA	NA	NA	NA	NA
WP_075790633.1|67552_67843_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_075790634.1|68000_70910_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	74.6	0.0e+00
72734:72755	attR	ATTTCGCGGACGCGAAAACGGC	NA	NA	NA	NA
>prophage 1
NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	457181	313053	353526	457181	integrase,transposase	Burkholderia_virus(37.5%)	33	314539:314598	327348:328668
WP_075790888.1|313053_313713_+|integrase	tyrosine-type recombinase/integrase	integrase	K4K327	Caulobacter_virus	27.8	1.5e-07
WP_075790889.1|313712_313931_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790890.1|314015_314444_+	hypothetical protein	NA	NA	NA	NA	NA
314539:314598	attL	CTGAACCGCCCCGGATTTGATGGAGGCTCCAACTCTTGAGAGAATGGAGCTATGAACAAG	NA	NA	NA	NA
WP_156895493.1|314589_315787_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	90.1	5.6e-141
WP_075790892.1|316045_317299_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_075790893.1|317295_318066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075790894.1|319410_320940_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	48.9	5.3e-128
WP_075790895.1|321031_321784_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	58.9	3.5e-72
WP_075790896.1|323196_323499_-	Dabb family protein	NA	NA	NA	NA	NA
WP_075790897.1|323495_325181_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	26.0	7.2e-17
WP_083684389.1|325346_326087_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_156895493.1|326157_327356_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	90.1	5.6e-141
WP_075790899.1|327403_327631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075790900.1|327633_328503_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA	NA
WP_083684392.1|328502_329633_-	maleylacetate reductase	NA	NA	NA	NA	NA
327348:328668	attR	CTTGTTCATAGCTCCATTCTCTCAAGAGTTGGAGCCTCCATCAAATCCGGGGCGGTTCAGATCGCCTCTGGCGCTTGCACCAGTCCAGTCGCAGCCATCTCATCGAGCTGGGAGGCCGCCCACCGTCTTGCTTGCTCGGCCGCGCCATGCTGCGCGTCGTATAGACGCACATTGGCTCCAGCCCGTGCAAATGCAATCGCCCAGCCGGCGCCCACCAACCCGGTGCCGATTACGGTCACGGCACGGCCGTCCAACAACTCTGTTGCCGTCACTTCGTTTGTCATGCTCACCTCTTCTGGTGGTCAGCCGACAATACCAAGTCGACCGACAATGTATAAAACGGCTCCCCAATTTTTTCGCCACGATAGAACTCTTCCGATTCATGGGGGACGAACTCGCCGATCAACGAAGGTCGCACGCCAAACACGGCGTCCGAATCGATATATGGGTCGAATTTGTCGAACACTTGGGTGACCAAAGTGGCGTGGCCGGGTGCCTGCACCAGGAAATGCATGTGAGCCGGTCGCCATGGATGGCGTCCGGTAGCTGACAGTAGGCGCCCCACTGGACCATCAGTCGGAATCGGATAGGCAACCGGCCGAACCGTACGGTAGTGGAAGCGCCCTTCGTCATCAGCGTGCAACCGGCCCCTGCAGGCCGAAGAGCCGCCAGCATACTGCACATCATAGAAGCCGGCATCGTCACAATGCCAGACATCGACCACCGCACCGGCCAGCGGCGTGCCGTTCTCCCCGCGTATCCGGCCCTCAACAAAACACGGGACCCCACTCGCACCGTGAGCGAGATCTTCACCGTGATCATGCGGCGCGGCATCCTGCACGTAAAAGGGTCCGAGCACCGAGGCTTCGGTGGCGCCCTCGCGATCCTGCTGGCCCAGCGCCACGGTCAGCATTGTCATGCCCAACACATCGGACAGCAGGATAAACTCTTGCCGATGCTCGTCACACTTCTGCCCCGTCTCCGTCAGGAACGCAATTGCATCCATCAGCTCAGGCTCGGTCAACTTGACCTCGCGCGCAAAGTCGTGCAGGTGACGGGTCAAGCTCGTTAGCAACTGCTTCAAGCGCGGGTTGGTGCACCGCTCCAGTCGCTCGTTGACCACTTCAGTAATATTGTCCGCAGTAACACCGTTCATCAACATTCCTCTCGCGCGGGTACCGGACGGCGGCCGTGGTAGGCAGCATCCAACAGCTGCAACAAGCGCGGGGTCGTGAGCCTGGCGGGATTCCAGTACGGGTTACGCATGGCAATCTCCACACACGGCCCGATCTGCGATTCCTGCATGCCCAGCTCACGGAGC	NA	NA	NA	NA
WP_075791018.1|329665_331129_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_075790901.1|331179_332187_-	hydroxyquinol 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_075790902.1|332245_332749_-	hydroxyquinol 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_075790903.1|333128_335879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075790904.1|335893_336952_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_075790905.1|336990_338241_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_075791019.1|338304_339525_-	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_083684398.1|339657_342102_-	RND family transporter	NA	NA	NA	NA	NA
WP_156895503.1|342098_343064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156895494.1|343246_344590_-	DUF1329 domain-containing protein	NA	NA	NA	NA	NA
WP_083684428.1|344615_346205_-	DUF1302 domain-containing protein	NA	NA	NA	NA	NA
WP_075790908.1|346367_347651_-	MFS transporter	NA	NA	NA	NA	NA
WP_075790909.1|347810_348764_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_075790910.1|348788_350327_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_075790911.1|350338_350887_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083684401.1|350883_351291_-	cytochrome c	NA	NA	NA	NA	NA
WP_075790913.1|351392_352184_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.3	5.2e-18
WP_156895495.1|352304_353526_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	80.6	3.9e-129
