assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001932795.1_ASM193279v1	NZ_CP013779	Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence	1	119987-120210	1	CRT	no		RT	Orphan	TTTGTGTTCCGTTTGTGTTCCGTTT	25	0	0	NA	NA	NA	3	3	Orphan	RT,cas3,DEDDh,DinG,csa3	NA|308aa|up_6|NZ_CP013779.1_113253_114177_-,NA|51aa|up_3|NZ_CP013779.1_116964_117117_-,NA|49aa|down_3|NZ_CP013779.1_124387_124534_-,NA|86aa|down_5|NZ_CP013779.1_127062_127320_+,NA|57aa|down_8|NZ_CP013779.1_129347_129518_-,NA|68aa|down_9|NZ_CP013779.1_129514_129718_-	NA|266aa|up_9|NZ_CP013779.1_110456_111254_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|243aa|up_8|NZ_CP013779.1_111498_112227_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|219aa|up_7|NZ_CP013779.1_112356_113013_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|up_6|NZ_CP013779.1_113253_114177_-	NA	NA|243aa|up_5|NZ_CP013779.1_114333_115062_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|577aa|up_4|NZ_CP013779.1_115221_116952_-	cd09108, PLDc_PMFPLD_like_1, Catalytic domain, repeat 1, of phospholipase D from Streptomyces Sp	NA|51aa|up_3|NZ_CP013779.1_116964_117117_-	NA	NA|82aa|up_2|NZ_CP013779.1_117606_117852_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|243aa|up_1|NZ_CP013779.1_117820_118549_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|56aa|up_0|NZ_CP013779.1_118604_118772_+	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|340aa|down_0|NZ_CP013779.1_120421_121441_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|197aa|down_1|NZ_CP013779.1_122406_122997_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|272aa|down_2|NZ_CP013779.1_123242_124058_-	pfam04986, Y2_Tnp, Putative transposase	NA|49aa|down_3|NZ_CP013779.1_124387_124534_-	NA	NA|396aa|down_4|NZ_CP013779.1_125807_126994_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|86aa|down_5|NZ_CP013779.1_127062_127320_+	NA	NA|167aa|down_6|NZ_CP013779.1_127421_127922_-	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|361aa|down_7|NZ_CP013779.1_128078_129161_+	pfam00665, rve, Integrase core domain	NA|57aa|down_8|NZ_CP013779.1_129347_129518_-	NA	NA|68aa|down_9|NZ_CP013779.1_129514_129718_-	NA
GCF_001932795.1_ASM193279v1	NZ_CP013779	Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence	2	121901-122078	1	PILER-CR	no	RT	RT	Unclear	TATTTTGAAATATTTATTTGTGTCCCGTTTGTGTTCCGTT	40	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,DEDDh,DinG,csa3	NA|308aa|up_8|NZ_CP013779.1_113253_114177_-,NA|51aa|up_5|NZ_CP013779.1_116964_117117_-,NA|447aa|up_1|NZ_CP013779.1_119068_120409_-,NA|49aa|down_2|NZ_CP013779.1_124387_124534_-,NA|86aa|down_4|NZ_CP013779.1_127062_127320_+,NA|57aa|down_7|NZ_CP013779.1_129347_129518_-,NA|68aa|down_8|NZ_CP013779.1_129514_129718_-,NA|75aa|down_9|NZ_CP013779.1_130054_130279_-	NA|219aa|up_9|NZ_CP013779.1_112356_113013_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|up_8|NZ_CP013779.1_113253_114177_-	NA	NA|243aa|up_7|NZ_CP013779.1_114333_115062_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|577aa|up_6|NZ_CP013779.1_115221_116952_-	cd09108, PLDc_PMFPLD_like_1, Catalytic domain, repeat 1, of phospholipase D from Streptomyces Sp	NA|51aa|up_5|NZ_CP013779.1_116964_117117_-	NA	NA|82aa|up_4|NZ_CP013779.1_117606_117852_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|243aa|up_3|NZ_CP013779.1_117820_118549_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|56aa|up_2|NZ_CP013779.1_118604_118772_+	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|447aa|up_1|NZ_CP013779.1_119068_120409_-	NA	NA|340aa|up_0|NZ_CP013779.1_120421_121441_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|197aa|down_0|NZ_CP013779.1_122406_122997_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|272aa|down_1|NZ_CP013779.1_123242_124058_-	pfam04986, Y2_Tnp, Putative transposase	NA|49aa|down_2|NZ_CP013779.1_124387_124534_-	NA	NA|396aa|down_3|NZ_CP013779.1_125807_126994_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|86aa|down_4|NZ_CP013779.1_127062_127320_+	NA	NA|167aa|down_5|NZ_CP013779.1_127421_127922_-	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|361aa|down_6|NZ_CP013779.1_128078_129161_+	pfam00665, rve, Integrase core domain	NA|57aa|down_7|NZ_CP013779.1_129347_129518_-	NA	NA|68aa|down_8|NZ_CP013779.1_129514_129718_-	NA	NA|75aa|down_9|NZ_CP013779.1_130054_130279_-	NA
GCF_001932795.1_ASM193279v1	NZ_CP013778	Piscirickettsia salmonis strain PM51819A, complete genome	1	1451338-1451458	1	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,csa3	Orphan	TTGATTAAGTCCAAGGGCTGCTAACCATTGATAAGCT	37	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,csa3	NA|158aa|up_7|NZ_CP013778.1_1442964_1443438_-,NA|172aa|up_3|NZ_CP013778.1_1448824_1449340_+,NA|88aa|up_2|NZ_CP013778.1_1449572_1449836_+,NA|137aa|up_1|NZ_CP013778.1_1450104_1450515_+,NA|141aa|up_0|NZ_CP013778.1_1450758_1451181_-,NA	NA|223aa|up_9|NZ_CP013778.1_1440912_1441581_-	PRK05920, PRK05920, aromatic acid decarboxylase; Validated	NA|461aa|up_8|NZ_CP013778.1_1441573_1442956_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|158aa|up_7|NZ_CP013778.1_1442964_1443438_-	NA	NA|420aa|up_6|NZ_CP013778.1_1443570_1444830_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|694aa|up_5|NZ_CP013778.1_1445285_1447367_+	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|337aa|up_4|NZ_CP013778.1_1447669_1448680_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|172aa|up_3|NZ_CP013778.1_1448824_1449340_+	NA	NA|88aa|up_2|NZ_CP013778.1_1449572_1449836_+	NA	NA|137aa|up_1|NZ_CP013778.1_1450104_1450515_+	NA	NA|141aa|up_0|NZ_CP013778.1_1450758_1451181_-	NA	NA|155aa|down_0|NZ_CP013778.1_1452835_1453300_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|161aa|down_1|NZ_CP013778.1_1453356_1453839_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|132aa|down_2|NZ_CP013778.1_1454693_1455089_+	pfam17775, UPF0225, UPF0225 domain	NA|265aa|down_3|NZ_CP013778.1_1455085_1455880_-	pfam01863, DUF45, Protein of unknown function DUF45	NA|242aa|down_4|NZ_CP013778.1_1456058_1456784_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|396aa|down_5|NZ_CP013778.1_1457029_1458217_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|376aa|down_6|NZ_CP013778.1_1458571_1459699_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|181aa|down_7|NZ_CP013778.1_1460029_1460572_-	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|229aa|down_8|NZ_CP013778.1_1460568_1461255_-	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|204aa|down_9|NZ_CP013778.1_1461258_1461870_-	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase
GCF_001932795.1_ASM193279v1	NZ_CP013778	Piscirickettsia salmonis strain PM51819A, complete genome	2	2333665-2333794	2	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,csa3	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	58	2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748|2333711-2333748	NZ_CP013778.1_156696-156733|NZ_CP013778.1_180843-180880|NZ_CP013778.1_384533-384570|NZ_CP013778.1_429541-429504|NZ_CP013778.1_435116-435079|NZ_CP013778.1_524832-524795|NZ_CP013778.1_539196-539159|NZ_CP013778.1_571258-571221|NZ_CP013778.1_616182-616145|NZ_CP013778.1_654616-654653|NZ_CP013778.1_654750-654787|NZ_CP013778.1_773750-773713|NZ_CP013778.1_884300-884263|NZ_CP013778.1_953715-953752|NZ_CP013778.1_963016-963053|NZ_CP013778.1_1045074-1045111|NZ_CP013778.1_1076950-1076987|NZ_CP013778.1_1085820-1085857|NZ_CP013778.1_1172151-1172114|NZ_CP013778.1_1175366-1175403|NZ_CP013778.1_1532085-1532048|NZ_CP013778.1_1629981-1630018|NZ_CP013778.1_1633807-1633844|NZ_CP013778.1_1837217-1837254|NZ_CP013778.1_2016915-2016952|NZ_CP013778.1_2125526-2125489|NZ_CP013778.1_2127796-2127833|NZ_CP013778.1_2149238-2149275|NZ_CP013778.1_2153619-2153656|NZ_CP013778.1_2196408-2196445|NZ_CP013778.1_2227015-2226978|NZ_CP013778.1_2432455-2432492|NZ_CP013778.1_2481737-2481774|NZ_CP013778.1_2546006-2546043|NZ_CP013778.1_2665506-2665543|NZ_CP013778.1_2711072-2711035|NZ_CP013778.1_2766757-2766720|NZ_CP013778.1_2768908-2768871|NZ_CP013778.1_2854530-2854567|NZ_CP013778.1_2864333-2864296|NZ_CP013778.1_2891308-2891345|NZ_CP013778.1_2907958-2907921|NZ_CP013778.1_2962863-2962826|NZ_CP013778.1_2963980-2963943|NZ_CP013778.1_2990576-2990539|NZ_CP013778.1_2994871-2994908|NZ_CP013778.1_3023632-3023595|NZ_CP013778.1_3082117-3082080|NZ_CP013778.1_1077084-1077121|NZ_CP013778.1_2323459-2323496|NZ_CP013778.1_3071939-3071976|NZ_CP013778.1_3081983-3081946|NZ_CP013779.1_7005-7042|NZ_CP013779.1_13629-13666|NZ_CP013779.1_22482-22445|NZ_CP013779.1_36400-36363|NZ_CP013779.1_136792-136755|NZ_CP013780.1_88772-88735	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,csa3	NA|73aa|up_9|NZ_CP013778.1_2324168_2324387_-,NA|65aa|up_5|NZ_CP013778.1_2328367_2328562_-,NA|141aa|up_3|NZ_CP013778.1_2329884_2330307_+,NA|105aa|up_0|NZ_CP013778.1_2332443_2332758_-,NA|97aa|down_0|NZ_CP013778.1_2334323_2334614_+,NA|197aa|down_1|NZ_CP013778.1_2334758_2335349_+,NA|99aa|down_2|NZ_CP013778.1_2335365_2335662_+,NA|384aa|down_3|NZ_CP013778.1_2335779_2336931_+,NA|192aa|down_4|NZ_CP013778.1_2337203_2337779_+	NA|73aa|up_9|NZ_CP013778.1_2324168_2324387_-	NA	NA|325aa|up_8|NZ_CP013778.1_2324754_2325729_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|85aa|up_7|NZ_CP013778.1_2326266_2326521_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP013778.1_2327243_2328230_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP013778.1_2328367_2328562_-	NA	NA|216aa|up_4|NZ_CP013778.1_2329244_2329892_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|141aa|up_3|NZ_CP013778.1_2329884_2330307_+	NA	NA|468aa|up_2|NZ_CP013778.1_2330468_2331872_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_1|NZ_CP013778.1_2331922_2332498_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_0|NZ_CP013778.1_2332443_2332758_-	NA	NA|97aa|down_0|NZ_CP013778.1_2334323_2334614_+	NA	NA|197aa|down_1|NZ_CP013778.1_2334758_2335349_+	NA	NA|99aa|down_2|NZ_CP013778.1_2335365_2335662_+	NA	NA|384aa|down_3|NZ_CP013778.1_2335779_2336931_+	NA	NA|192aa|down_4|NZ_CP013778.1_2337203_2337779_+	NA	NA|278aa|down_5|NZ_CP013778.1_2337836_2338670_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_6|NZ_CP013778.1_2338785_2339970_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_7|NZ_CP013778.1_2339988_2340933_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_8|NZ_CP013778.1_2341237_2342023_+	TIGR03545, TIGR03545, TIGR03545 family protein	NA|123aa|down_9|NZ_CP013778.1_2342140_2342509_-	COG3603, COG3603, Uncharacterized conserved protein [Function unknown]
