The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013908	Streptococcus agalactiae strain GBS-M002, complete genome	2092570	36583	48648	2092570		Synechococcus_phage(28.57%)	8	NA	NA
WP_001042250.1|36583_40309_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	1.9e-38
WP_000220676.1|40542_41997_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
WP_001291328.1|42024_43047_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.7	1.1e-63
WP_000685109.1|43214_43763_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.4e-25
WP_000780022.1|43785_44538_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000166549.1|44557_46105_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.2	3.9e-78
WP_001045908.1|46297_47197_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783419.1|47343_48648_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	3.7e-05
>prophage 2
NZ_CP013908	Streptococcus agalactiae strain GBS-M002, complete genome	2092570	586551	667233	2092570	terminase,integrase,tail,protease,holin,portal,transposase,head,capsid	Streptococcus_phage(86.0%)	79	585277:585291	623039:623053
585277:585291	attL	CCCATTTTAGGTTTG	NA	NA	NA	NA
WP_071659971.1|586551_587166_-|integrase	site-specific integrase	integrase	F8HGP4	Streptococcus_phage	60.7	9.2e-55
WP_001872365.1|587168_587435_-	hypothetical protein	NA	Q77YW7	Streptococcus_phage	65.2	9.2e-20
WP_000640623.1|587434_587839_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001122304.1|588000_588201_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_001865698.1|588222_588483_+|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.0	3.4e-11
WP_001867107.1|588608_588818_+|transposase	transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
WP_000508795.1|588990_589152_-	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_000594367.1|589893_591171_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000353149.1|591180_591837_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
WP_000594351.1|591836_593213_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_000699093.1|593309_593963_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.6	8.1e-25
WP_000734168.1|593959_595261_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.7	1.7e-05
WP_000076709.1|596137_596317_+	CsbD family protein	NA	J7KJ36	Streptococcus_phage	96.4	4.3e-21
WP_000027835.1|596358_596547_+	hypothetical protein	NA	J7KIW4	Streptococcus_phage	78.2	3.3e-16
WP_000078931.1|596971_598177_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_001106189.1|598295_598856_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_000134196.1|598856_600809_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.8	1.5e-143
WP_000094341.1|600902_602627_+	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_000589685.1|602720_603362_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_000409124.1|603382_603868_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_075316597.1|603880_604336_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	48.2	2.3e-26
WP_000022829.1|604533_605841_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	95.4	1.5e-235
WP_000823925.1|605948_607013_-	endonuclease	NA	NA	NA	NA	NA
WP_000772014.1|607241_608525_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_001127193.1|608517_609030_+	shikimate kinase	NA	NA	NA	NA	NA
WP_000089337.1|609086_610460_+	LCP family protein	NA	NA	NA	NA	NA
WP_000902654.1|610560_611916_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	73.6	1.8e-191
WP_001261523.1|612437_612956_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000445922.1|613258_613789_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_075316598.1|613958_618065_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_000459853.1|619834_621703_+	XRE family transcriptional regulator	NA	E4ZFJ9	Streptococcus_phage	80.9	1.2e-302
WP_001122250.1|622111_622681_+	hypothetical protein	NA	A0A1B0RXB3	Streptococcus_phage	81.0	1.1e-86
WP_000905647.1|622719_624675_-	DNA polymerase	NA	D0R0B0	Streptococcus_phage	83.6	0.0e+00
623039:623053	attR	CCCATTTTAGGTTTG	NA	NA	NA	NA
WP_000208947.1|624905_625469_-	DUF2815 family protein	NA	A0A1B0RXA9	Streptococcus_phage	92.8	1.6e-90
WP_001898230.1|625473_626595_-	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	88.5	1.2e-198
WP_000041409.1|626587_626911_-	hypothetical protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	1.5e-32
WP_001160922.1|627307_629587_+	hypothetical protein	NA	A0A1B0RXC5	Streptococcus_phage	79.8	0.0e+00
WP_001208491.1|629870_630152_+	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	78.5	2.0e-36
WP_000768924.1|630132_631509_+	DEAD/DEAH box helicase	NA	A0A1X9I6B0	Streptococcus_phage	86.2	3.9e-231
WP_000356300.1|631501_631999_+	hypothetical protein	NA	A0A1B0RXB9	Streptococcus_phage	75.0	4.3e-63
WP_000640709.1|632397_633435_+	methionine adenosyltransferase	NA	E4ZFL0	Streptococcus_phage	84.6	3.6e-168
WP_001138027.1|633436_633802_+	HNH endonuclease	NA	A0A1B0RXJ3	Streptococcus_phage	90.1	6.4e-64
WP_000999416.1|634119_634575_+	hypothetical protein	NA	A0A1B0RXC6	Streptococcus_phage	56.2	6.2e-48
WP_000211738.1|634546_635803_+	DNA modification methylase	NA	A0A1B0RXE5	Streptococcus_phage	89.0	1.2e-221
WP_001241132.1|635799_637071_+	DNA cytosine methyltransferase	NA	M1NSK8	Streptococcus_phage	94.0	1.3e-231
WP_000886223.1|637135_637324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000158644.1|637394_637619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000211844.1|637733_637988_+	hypothetical protein	NA	M1NSE3	Streptococcus_phage	56.1	3.9e-20
WP_000998225.1|637989_638199_+	DUF4314 domain-containing protein	NA	A0A1X9I6A3	Streptococcus_phage	69.6	1.3e-21
WP_001007669.1|638247_638721_+|terminase	phage terminase small subunit P27 family	terminase	A0A1X9I6K0	Streptococcus_phage	97.5	8.6e-85
WP_000220981.1|638717_640310_+|terminase	terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.7	1.8e-307
WP_000024184.1|640376_640670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000181405.1|640662_641001_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000024081.1|641084_641324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075316599.1|641385_642675_+|portal	phage portal protein	portal	A0A1B0RXD8	Streptococcus_phage	90.9	1.6e-229
WP_001225233.1|642667_643366_+|protease	Clp protease ClpP	protease	A0A1B0RXE1	Streptococcus_phage	83.2	4.9e-105
WP_000040497.1|643379_644588_+|capsid	phage major capsid protein	capsid	M1Q1R5	Streptococcus_phage	91.0	8.9e-211
WP_000631138.1|644584_644842_+|head,tail	phage gp6-like head-tail connector protein	head,tail	D0R0D7	Streptococcus_phage	78.8	8.6e-31
WP_000684960.1|644841_645180_+|head,tail	head-tail adaptor protein	head,tail	A0A1B0RXJ6	Streptococcus_phage	70.5	4.3e-38
WP_000161631.1|645172_645541_+	HK97 gp10 family phage protein	NA	Q6DMT7	Streptococcus_phage	61.3	2.4e-34
WP_001209966.1|645549_645876_+	hypothetical protein	NA	M1Q1Z4	Streptococcus_phage	68.5	4.1e-38
WP_000818570.1|645878_646448_+	hypothetical protein	NA	A0A1B0RXE2	Streptococcus_phage	95.2	1.3e-98
WP_001249610.1|646459_646879_+	hypothetical protein	NA	A0A1X9I691	Streptococcus_phage	75.5	3.7e-55
WP_000918335.1|647061_650181_+	hypothetical protein	NA	Q6DMT2	Streptococcus_phage	77.2	5.8e-246
WP_000618012.1|650177_650903_+	hypothetical protein	NA	Q6DMT1	Streptococcus_phage	57.9	9.4e-83
WP_000966165.1|650902_653818_+	hypothetical protein	NA	Q6DMT0	Streptococcus_phage	65.2	0.0e+00
WP_000796416.1|653830_655687_+	hypothetical protein	NA	Q6DMS9	Streptococcus_phage	73.8	1.3e-258
WP_000661351.1|655704_656109_+|holin	phage holin family protein	holin	D0R0E9	Streptococcus_phage	74.8	6.7e-46
WP_000515885.1|656110_657580_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A1X9I678	Streptococcus_phage	96.9	6.9e-274
WP_000111881.1|657803_659045_+	recombinase family protein	NA	A0A1X9I6J1	Streptococcus_phage	92.7	1.5e-221
WP_075316636.1|658983_660300_+	recombinase family protein	NA	E4ZFN9	Streptococcus_phage	95.0	1.6e-245
WP_001025785.1|660520_660994_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_000447668.1|661046_661355_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000142741.1|661447_662632_+	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001176342.1|662892_663105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000757296.1|663222_663960_+	acid phosphatase AphA	NA	NA	NA	NA	NA
WP_001267096.1|664280_664799_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000944932.1|665635_665968_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_088181595.1|666088_667233_-|transposase	IS3-like element ISSag5 family transposase	transposase	Q8W6R2	Burkholderia_virus	26.1	2.4e-16
>prophage 3
NZ_CP013908	Streptococcus agalactiae strain GBS-M002, complete genome	2092570	1520410	1531144	2092570		Streptococcus_phage(84.62%)	16	NA	NA
WP_000767485.1|1520410_1521238_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.4	5.1e-125
WP_000287943.1|1521278_1521635_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
WP_000966772.1|1521636_1522113_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
WP_000232152.1|1522169_1523351_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	1.1e-168
WP_001167085.1|1523413_1523962_-	acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
WP_000158399.1|1524029_1525121_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	78.0	1.7e-165
WP_000603275.1|1525253_1525889_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_001868293.1|1525932_1526037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075316619.1|1526021_1526183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001868299.1|1526158_1527022_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.7	3.7e-110
WP_000358198.1|1527027_1527354_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000364568.1|1527384_1528248_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	50.0	2.5e-74
WP_000715594.1|1528267_1528903_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	60.1	1.4e-66
WP_001144246.1|1528991_1529651_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	56.5	4.7e-65
WP_000178144.1|1529669_1530380_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.1	4.7e-18
WP_001185985.1|1530379_1531144_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
>prophage 4
NZ_CP013908	Streptococcus agalactiae strain GBS-M002, complete genome	2092570	1900996	1918522	2092570	transposase	Streptococcus_phage(100.0%)	22	NA	NA
WP_000420682.1|1900996_1901311_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1901326_1901713_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|1901741_1903127_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|1903129_1903282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1903304_1904510_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1904552_1904774_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1904890_1905388_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1905362_1905869_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1905852_1908300_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|1908302_1910480_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|1910476_1911478_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001863540.1|1911474_1912410_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.7	2.6e-170
WP_011058339.1|1912684_1912771_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_017647393.1|1912786_1914706_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.4	0.0e+00
WP_011058338.1|1914806_1914992_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
WP_001227347.1|1915051_1915405_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_013670292.1|1915609_1915681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000804884.1|1915909_1916332_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	99.3	1.3e-71
WP_000857133.1|1916328_1916559_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_001845478.1|1916784_1917036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000814511.1|1917019_1917223_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|1917304_1918522_+|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
>prophage 5
NZ_CP013908	Streptococcus agalactiae strain GBS-M002, complete genome	2092570	2037823	2047315	2092570		Streptococcus_phage(81.82%)	17	NA	NA
WP_000038826.1|2037823_2038201_-	DUF1492 domain-containing protein	NA	Q7Y4J3	Streptococcus_phage	37.9	3.2e-10
WP_000891152.1|2038334_2038823_-	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	59.3	3.5e-49
WP_001258764.1|2038895_2039453_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	58.9	2.7e-29
WP_000694573.1|2039610_2039784_-	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	56.1	4.3e-10
WP_001069293.1|2039780_2040038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000656430.1|2040330_2041725_-	hypothetical protein	NA	W8CQP1	Croceibacter_phage	33.7	3.7e-43
WP_001029296.1|2041736_2042594_-	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	72.9	3.0e-120
WP_001100460.1|2042594_2042867_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	56.8	1.8e-18
WP_001157003.1|2043207_2043399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001256559.1|2043401_2043623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000877499.1|2043619_2043952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001259478.1|2044028_2044535_-	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	35.4	4.5e-07
WP_000130289.1|2044623_2044797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021393.1|2044895_2045534_-	Bro-N domain-containing protein	NA	NA	NA	NA	NA
WP_001258609.1|2045769_2046372_-	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	46.7	6.7e-42
WP_000909285.1|2046387_2046573_-	hypothetical protein	NA	A0A1X9I5U7	Streptococcus_phage	54.8	6.2e-07
WP_001080836.1|2046727_2047315_+	helix-turn-helix domain-containing protein	NA	A0A1X9I5U6	Streptococcus_phage	37.5	4.0e-15
