assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001922305.1_ASM192230v1	NZ_CP018839	Thauera chlorobenzoica strain 3CB1 chromosome, complete genome	1	1544543-1547969	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	 Type I-U?,Type I-U,Type I-C	GTTTCAATCCACGCGCCCGTGCGGGGCGCGAC,GTTTCAATCCACGCGCCCGTGCGGGGCGCGAC,GTTTCAATCCACGCGCCCGTGCGGGGCGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	51,51,50	51	TypeI-U?,TypeI-U,TypeI-C	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	NA|181aa|up_2|NZ_CP018839.1_1539700_1540243_-,NA	NA|343aa|up_9|NZ_CP018839.1_1531751_1532780_+	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase	NA|234aa|up_8|NZ_CP018839.1_1532879_1533581_+	pfam13489, Methyltransf_23, Methyltransferase domain	NA|261aa|up_7|NZ_CP018839.1_1533679_1534462_+	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|725aa|up_6|NZ_CP018839.1_1534463_1536638_+	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain	NA|540aa|up_5|NZ_CP018839.1_1536811_1538431_+	PRK03776, PRK03776, phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase	NA|220aa|up_4|NZ_CP018839.1_1538476_1539136_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|127aa|up_3|NZ_CP018839.1_1539282_1539663_-	pfam09345, DUF1987, Domain of unknown function (DUF1987)	NA|181aa|up_2|NZ_CP018839.1_1539700_1540243_-	NA	NA|664aa|up_1|NZ_CP018839.1_1540286_1542278_-	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|255aa|up_0|NZ_CP018839.1_1543712_1544477_+	COG2908, COG2908, Uncharacterized protein conserved in bacteria [Function unknown]	cas2|97aa|down_0|NZ_CP018839.1_1548164_1548455_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|347aa|down_1|NZ_CP018839.1_1548464_1549505_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|211aa|down_2|NZ_CP018839.1_1549508_1550141_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|293aa|down_3|NZ_CP018839.1_1550160_1551039_-	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG	cas8c|608aa|down_4|NZ_CP018839.1_1551038_1552862_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|225aa|down_5|NZ_CP018839.1_1552858_1553533_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|748aa|down_6|NZ_CP018839.1_1553600_1555844_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|128aa|down_7|NZ_CP018839.1_1556198_1556582_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|309aa|down_8|NZ_CP018839.1_1556675_1557602_-	PRK09791, PRK09791, LysR family transcriptional regulator	NA|343aa|down_9|NZ_CP018839.1_1557760_1558789_+	cd13665, PBP2_TRAP_Dctp3_4, Periplasmic substrate-binding component of TRAP-type C4-dicarboxylate transport system DctP3 and DctP4; the type 2 periplasmic-binding protein fold
GCF_001922305.1_ASM192230v1	NZ_CP018839	Thauera chlorobenzoica strain 3CB1 chromosome, complete genome	2	1933401-1935563	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	Type I-E	GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	35,35,35	35	TypeI-E	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	NA|85aa|up_8|NZ_CP018839.1_1924549_1924804_+,NA|104aa|down_2|NZ_CP018839.1_1937600_1937912_-,NA|62aa|down_5|NZ_CP018839.1_1942890_1943076_-	NA|290aa|up_9|NZ_CP018839.1_1923687_1924557_+	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|85aa|up_8|NZ_CP018839.1_1924549_1924804_+	NA	cas3|835aa|up_7|NZ_CP018839.1_1925239_1927744_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|502aa|up_6|NZ_CP018839.1_1927740_1929246_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|184aa|up_5|NZ_CP018839.1_1929250_1929802_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|215aa|up_4|NZ_CP018839.1_1929798_1930443_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|344aa|up_3|NZ_CP018839.1_1930456_1931488_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|238aa|up_2|NZ_CP018839.1_1931497_1932211_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|NZ_CP018839.1_1932212_1933088_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|NZ_CP018839.1_1933065_1933353_+	TIGR01873, CRISPR-associated_endoribonuclease_Cas2, CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI	NA|539aa|down_0|NZ_CP018839.1_1935595_1937212_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|120aa|down_1|NZ_CP018839.1_1937241_1937601_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|104aa|down_2|NZ_CP018839.1_1937600_1937912_-	NA	NA|509aa|down_3|NZ_CP018839.1_1939379_1940906_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|263aa|down_4|NZ_CP018839.1_1940950_1941739_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|62aa|down_5|NZ_CP018839.1_1942890_1943076_-	NA	NA|239aa|down_6|NZ_CP018839.1_1943137_1943854_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|357aa|down_7|NZ_CP018839.1_1943850_1944921_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|386aa|down_8|NZ_CP018839.1_1944969_1946127_-	PRK09082, PRK09082, methionine aminotransferase; Validated	NA|103aa|down_9|NZ_CP018839.1_1946230_1946539_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE
GCF_001922305.1_ASM192230v1	NZ_CP018839	Thauera chlorobenzoica strain 3CB1 chromosome, complete genome	3	1938038-1939165	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	Type I-E	GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTCC	28,28,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	17,18,18	18	TypeI-E	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	NA|104aa|up_0|NZ_CP018839.1_1937600_1937912_-,NA|62aa|down_2|NZ_CP018839.1_1942890_1943076_-	cas8e|502aa|up_9|NZ_CP018839.1_1927740_1929246_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|184aa|up_8|NZ_CP018839.1_1929250_1929802_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|215aa|up_7|NZ_CP018839.1_1929798_1930443_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|344aa|up_6|NZ_CP018839.1_1930456_1931488_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|238aa|up_5|NZ_CP018839.1_1931497_1932211_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_4|NZ_CP018839.1_1932212_1933088_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_3|NZ_CP018839.1_1933065_1933353_+	TIGR01873, CRISPR-associated_endoribonuclease_Cas2, CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI	NA|539aa|up_2|NZ_CP018839.1_1935595_1937212_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|120aa|up_1|NZ_CP018839.1_1937241_1937601_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|104aa|up_0|NZ_CP018839.1_1937600_1937912_-	NA	NA|509aa|down_0|NZ_CP018839.1_1939379_1940906_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|263aa|down_1|NZ_CP018839.1_1940950_1941739_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|62aa|down_2|NZ_CP018839.1_1942890_1943076_-	NA	NA|239aa|down_3|NZ_CP018839.1_1943137_1943854_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|357aa|down_4|NZ_CP018839.1_1943850_1944921_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|386aa|down_5|NZ_CP018839.1_1944969_1946127_-	PRK09082, PRK09082, methionine aminotransferase; Validated	NA|103aa|down_6|NZ_CP018839.1_1946230_1946539_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|95aa|down_7|NZ_CP018839.1_1946541_1946826_-	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only]	NA|79aa|down_8|NZ_CP018839.1_1947177_1947414_+	pfam02069, Metallothio_Pro, Prokaryotic metallothionein	NA|540aa|down_9|NZ_CP018839.1_1947422_1949042_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_001922305.1_ASM192230v1	NZ_CP018839	Thauera chlorobenzoica strain 3CB1 chromosome, complete genome	4	1941812-1942824	4,4,4	CRT,PILER-CR,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	Type I-E	GTCTTCCCCACGTCCGTGGGGGTGTTTCNN,GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTC	30,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	16,14,14	16	TypeI-E	DEDDh,WYL,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas8e,cse2gr11,cas6e,DinG,PrimPol,csa3	NA|104aa|up_2|NZ_CP018839.1_1937600_1937912_-,NA|62aa|down_0|NZ_CP018839.1_1942890_1943076_-	cas6e|215aa|up_9|NZ_CP018839.1_1929798_1930443_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|344aa|up_8|NZ_CP018839.1_1930456_1931488_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|238aa|up_7|NZ_CP018839.1_1931497_1932211_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_6|NZ_CP018839.1_1932212_1933088_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_5|NZ_CP018839.1_1933065_1933353_+	TIGR01873, CRISPR-associated_endoribonuclease_Cas2, CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI	NA|539aa|up_4|NZ_CP018839.1_1935595_1937212_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|120aa|up_3|NZ_CP018839.1_1937241_1937601_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|104aa|up_2|NZ_CP018839.1_1937600_1937912_-	NA	NA|509aa|up_1|NZ_CP018839.1_1939379_1940906_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|263aa|up_0|NZ_CP018839.1_1940950_1941739_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|62aa|down_0|NZ_CP018839.1_1942890_1943076_-	NA	NA|239aa|down_1|NZ_CP018839.1_1943137_1943854_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|357aa|down_2|NZ_CP018839.1_1943850_1944921_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|386aa|down_3|NZ_CP018839.1_1944969_1946127_-	PRK09082, PRK09082, methionine aminotransferase; Validated	NA|103aa|down_4|NZ_CP018839.1_1946230_1946539_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|95aa|down_5|NZ_CP018839.1_1946541_1946826_-	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only]	NA|79aa|down_6|NZ_CP018839.1_1947177_1947414_+	pfam02069, Metallothio_Pro, Prokaryotic metallothionein	NA|540aa|down_7|NZ_CP018839.1_1947422_1949042_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|473aa|down_8|NZ_CP018839.1_1949038_1950457_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|249aa|down_9|NZ_CP018839.1_1950491_1951238_-	PRK14852, PRK14852, hypothetical protein; Provisional
