assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001922025.1_ASM192202v1	NZ_CP018796	Lactobacillus parabuchneri strain FAM21731 chromosome, complete genome	1	925472-925805	1,1,1	CRT,CRISPRCasFinder,PILER-CR	no		PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Orphan	GGGATCACCCCCACATACGTGGGGAATAC,GGATCACCCCCACATACGTGGGGAATAC,GGGATCACCCCCACATACGTGGGGAATAC	29,28,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	5,5,4	5	Orphan	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,csa3	NA|74aa|up_1|NZ_CP018796.1_923753_923975_-,NA|282aa|up_0|NZ_CP018796.1_923992_924838_-,NA|229aa|down_2|NZ_CP018796.1_928266_928953_+,NA|162aa|down_4|NZ_CP018796.1_929962_930448_-	NA|252aa|up_9|NZ_CP018796.1_908995_909751_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|865aa|up_8|NZ_CP018796.1_910005_912600_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|400aa|up_7|NZ_CP018796.1_915924_917124_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|226aa|up_6|NZ_CP018796.1_917761_918439_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|445aa|up_5|NZ_CP018796.1_918551_919886_-	TIGR00791, Gluconate_permease, gluconate transporter	NA|215aa|up_4|NZ_CP018796.1_919977_920622_-	cd00452, KDPG_aldolase, KDPG and KHG aldolase	NA|350aa|up_3|NZ_CP018796.1_920623_921673_-	COG3734, DgoK, 2-keto-3-deoxy-galactonokinase [Carbohydrate transport and metabolism]	NA|383aa|up_2|NZ_CP018796.1_921650_922799_-	PRK14017, PRK14017, galactonate dehydratase; Provisional	NA|74aa|up_1|NZ_CP018796.1_923753_923975_-	NA	NA|282aa|up_0|NZ_CP018796.1_923992_924838_-	NA	NA|292aa|down_0|NZ_CP018796.1_926059_926935_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|341aa|down_1|NZ_CP018796.1_927126_928149_+	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|229aa|down_2|NZ_CP018796.1_928266_928953_+	NA	NA|242aa|down_3|NZ_CP018796.1_929200_929926_-	cd07377, WHTH_GntR, Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators	NA|162aa|down_4|NZ_CP018796.1_929962_930448_-	NA	NA|470aa|down_5|NZ_CP018796.1_930449_931859_-	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	NA|311aa|down_6|NZ_CP018796.1_931879_932812_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|332aa|down_7|NZ_CP018796.1_933290_934286_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|307aa|down_8|NZ_CP018796.1_934582_935503_+	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|132aa|down_9|NZ_CP018796.1_935548_935944_+	PRK11797, PRK11797, D-ribose pyranase; Provisional
GCF_001922025.1_ASM192202v1	NZ_CP018796	Lactobacillus parabuchneri strain FAM21731 chromosome, complete genome	2	953660-953865	2	CRISPRCasFinder	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Type I-E	ACCCCCACACCAGTGGGGAATAC	23	0	0	NA	NA	NA	3	3	TypeI-E	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,csa3	NA|397aa|up_3|NZ_CP018796.1_949534_950725_+,NA|423aa|down_8|NZ_CP018796.1_963936_965205_-	NA|305aa|up_9|NZ_CP018796.1_940301_941216_+	TIGR02152, Putative_ribokinase, ribokinase	NA|539aa|up_8|NZ_CP018796.1_941868_943485_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|647aa|up_7|NZ_CP018796.1_943497_945438_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|443aa|up_6|NZ_CP018796.1_945559_946888_-	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase	NA|401aa|up_5|NZ_CP018796.1_946899_948102_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|395aa|up_4|NZ_CP018796.1_948152_949337_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|397aa|up_3|NZ_CP018796.1_949534_950725_+	NA	NA|114aa|up_2|NZ_CP018796.1_950912_951254_+	PRK06529, PRK06529, amidase; Provisional	NA|263aa|up_1|NZ_CP018796.1_951259_952047_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|427aa|up_0|NZ_CP018796.1_952090_953371_+	PRK06529, PRK06529, amidase; Provisional	DEDDh|297aa|down_0|NZ_CP018796.1_953894_954785_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|318aa|down_1|NZ_CP018796.1_954781_955735_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|NZ_CP018796.1_955738_956407_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|247aa|down_3|NZ_CP018796.1_956419_957160_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|363aa|down_4|NZ_CP018796.1_957140_958229_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|210aa|down_5|NZ_CP018796.1_958221_958851_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|585aa|down_6|NZ_CP018796.1_958871_960626_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|934aa|down_7|NZ_CP018796.1_960615_963417_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|423aa|down_8|NZ_CP018796.1_963936_965205_-	NA	NA|287aa|down_9|NZ_CP018796.1_965924_966785_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]
GCF_001922025.1_ASM192202v1	NZ_CP018796	Lactobacillus parabuchneri strain FAM21731 chromosome, complete genome	3	965354-965566	3,2	CRISPRCasFinder,PILER-CR	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Type I-E	GGATCACCCCTACACACGTGGGGAATAC,CGGGATCACCCCTACACACGTGGGGAATACAC	28,32	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B	3,2	3	TypeI-E	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,csa3	NA|423aa|up_0|NZ_CP018796.1_963936_965205_-,NA	NA|427aa|up_9|NZ_CP018796.1_952090_953371_+	PRK06529, PRK06529, amidase; Provisional	DEDDh|297aa|up_8|NZ_CP018796.1_953894_954785_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|318aa|up_7|NZ_CP018796.1_954781_955735_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|up_6|NZ_CP018796.1_955738_956407_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|247aa|up_5|NZ_CP018796.1_956419_957160_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|363aa|up_4|NZ_CP018796.1_957140_958229_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|210aa|up_3|NZ_CP018796.1_958221_958851_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|585aa|up_2|NZ_CP018796.1_958871_960626_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|934aa|up_1|NZ_CP018796.1_960615_963417_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|423aa|up_0|NZ_CP018796.1_963936_965205_-	NA	NA|287aa|down_0|NZ_CP018796.1_965924_966785_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|457aa|down_1|NZ_CP018796.1_967378_968749_-	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like	NA|355aa|down_2|NZ_CP018796.1_968745_969810_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|45aa|down_3|NZ_CP018796.1_970805_970940_-	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|302aa|down_4|NZ_CP018796.1_971030_971936_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|312aa|down_5|NZ_CP018796.1_972052_972988_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|385aa|down_6|NZ_CP018796.1_973675_974830_+	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88	NA|253aa|down_7|NZ_CP018796.1_975035_975794_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|282aa|down_8|NZ_CP018796.1_976167_977013_+	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional	NA|272aa|down_9|NZ_CP018796.1_977030_977846_+	PRK06935, PRK06935, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
GCF_001922025.1_ASM192202v1	NZ_CP018796	Lactobacillus parabuchneri strain FAM21731 chromosome, complete genome	4	966947-967156	4	CRISPRCasFinder	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Type I-E	ATCACCCCTACGTGTGTGGGGAATAC	26	0	0	NA	NA	I-B,III-A,III-B	3	3	TypeI-E	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,csa3	NA|423aa|up_1|NZ_CP018796.1_963936_965205_-,NA	DEDDh|297aa|up_9|NZ_CP018796.1_953894_954785_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|318aa|up_8|NZ_CP018796.1_954781_955735_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|up_7|NZ_CP018796.1_955738_956407_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|247aa|up_6|NZ_CP018796.1_956419_957160_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|363aa|up_5|NZ_CP018796.1_957140_958229_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|210aa|up_4|NZ_CP018796.1_958221_958851_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|585aa|up_3|NZ_CP018796.1_958871_960626_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|934aa|up_2|NZ_CP018796.1_960615_963417_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|423aa|up_1|NZ_CP018796.1_963936_965205_-	NA	NA|287aa|up_0|NZ_CP018796.1_965924_966785_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|457aa|down_0|NZ_CP018796.1_967378_968749_-	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like	NA|355aa|down_1|NZ_CP018796.1_968745_969810_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|45aa|down_2|NZ_CP018796.1_970805_970940_-	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|302aa|down_3|NZ_CP018796.1_971030_971936_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|312aa|down_4|NZ_CP018796.1_972052_972988_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|385aa|down_5|NZ_CP018796.1_973675_974830_+	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88	NA|253aa|down_6|NZ_CP018796.1_975035_975794_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|282aa|down_7|NZ_CP018796.1_976167_977013_+	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional	NA|272aa|down_8|NZ_CP018796.1_977030_977846_+	PRK06935, PRK06935, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|329aa|down_9|NZ_CP018796.1_977969_978956_+	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)
GCF_001922025.1_ASM192202v1	NZ_CP018796	Lactobacillus parabuchneri strain FAM21731 chromosome, complete genome	5	993148-993604	2,5,3	CRT,CRISPRCasFinder,PILER-CR	no		PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Orphan	AGGATTACCCCCACATGCGTGGGGAATAC,GGATTACCCCCACATGCGTGGGGAATAC,AGGATTACCCCCACATGCGTGGGGAATAC	29,28,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	7,7,6	7	Orphan	PrimPol,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,csa3	NA,NA|87aa|down_1|NZ_CP018796.1_995660_995921_-,NA|424aa|down_5|NZ_CP018796.1_998702_999974_+	NA|346aa|up_9|NZ_CP018796.1_979810_980848_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|473aa|up_8|NZ_CP018796.1_981004_982423_-	pfam02614, UxaC, Glucuronate isomerase	NA|542aa|up_7|NZ_CP018796.1_982443_984069_-	pfam16257, UxaE, tagaturonate epimerase	NA|282aa|up_6|NZ_CP018796.1_984205_985051_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|373aa|up_5|NZ_CP018796.1_985065_986184_-	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]	NA|508aa|up_4|NZ_CP018796.1_986233_987757_-	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|432aa|up_3|NZ_CP018796.1_988073_989369_-	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane]	NA|143aa|up_2|NZ_CP018796.1_990055_990484_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|559aa|up_1|NZ_CP018796.1_990613_992290_+	PRK08617, PRK08617, acetolactate synthase AlsS	NA|238aa|up_0|NZ_CP018796.1_992308_993022_+	cd17299, acetolactate_decarboxylase, alpha-acetolactate decarboxylase	NA|590aa|down_0|NZ_CP018796.1_993926_995696_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|87aa|down_1|NZ_CP018796.1_995660_995921_-	NA	NA|316aa|down_2|NZ_CP018796.1_995933_996881_-	cd12172, PGDH_like_2, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains	NA|261aa|down_3|NZ_CP018796.1_996899_997682_-	PRK06935, PRK06935, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|249aa|down_4|NZ_CP018796.1_997700_998447_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|424aa|down_5|NZ_CP018796.1_998702_999974_+	NA	NA|344aa|down_6|NZ_CP018796.1_999999_1001031_+	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|336aa|down_7|NZ_CP018796.1_1001122_1002130_+	cd06283, PBP1_RegR_EndR_KdgR-like, ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR	NA|399aa|down_8|NZ_CP018796.1_1002230_1003427_-	PRK07574, PRK07574, NAD-dependent formate dehydrogenase	NA|130aa|down_9|NZ_CP018796.1_1003609_1003999_+	pfam14552, Tautomerase_2, Tautomerase enzyme
