assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001908455.1_ASM190845v1	NZ_CP018324	Lactobacillus plantarum subsp. plantarum strain TS12 chromosome, complete genome	1	2154877-2155571	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2,csa3	csa3,cas3,DEDDh,DinG,WYL,cas9,cas1,cas2,csn2	Type II-B,Type II-A,Type II-C	GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC,GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC,GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC	36,36,36	0	0	NA	NA	NA:NA:NA	9,9,10	10	TypeII-B,TypeII-A,TypeII-C	csa3,cas3,DEDDh,DinG,WYL,cas9,cas1,cas2,csn2	NA|236aa|up_5|NZ_CP018324.1_2146903_2147611_+,NA	NA|247aa|up_9|NZ_CP018324.1_2141997_2142738_+	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only]	NA|531aa|up_8|NZ_CP018324.1_2142980_2144573_+	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|157aa|up_7|NZ_CP018324.1_2144688_2145159_-	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|455aa|up_6|NZ_CP018324.1_2145391_2146756_+	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|236aa|up_5|NZ_CP018324.1_2146903_2147611_+	NA	NA|261aa|up_4|NZ_CP018324.1_2147636_2148419_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	cas9|1363aa|up_3|NZ_CP018324.1_2148707_2152796_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|NZ_CP018324.1_2152989_2153895_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP018324.1_2153872_2154178_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|226aa|up_0|NZ_CP018324.1_2154174_2154852_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|913aa|down_0|NZ_CP018324.1_2155634_2158373_-	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp	NA|253aa|down_1|NZ_CP018324.1_2158657_2159416_+	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|65aa|down_2|NZ_CP018324.1_2159458_2159653_-	pfam04024, PspC, PspC domain	NA|158aa|down_3|NZ_CP018324.1_2160432_2160906_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|141aa|down_4|NZ_CP018324.1_2161051_2161474_+	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|152aa|down_5|NZ_CP018324.1_2161561_2162017_-	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|95aa|down_6|NZ_CP018324.1_2162013_2162298_-	smart00850, LytTR, LytTr DNA-binding domain	csa3|110aa|down_7|NZ_CP018324.1_2163887_2164217_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|398aa|down_8|NZ_CP018324.1_2164281_2165475_+	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|283aa|down_9|NZ_CP018324.1_2165718_2166567_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins
GCF_001908455.1_ASM190845v1	NZ_CP018330	Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-6, complete sequence	1	18328-18486	1	CRISPRCasFinder	no			Orphan	TCAAACCCTTGCTACAAGCAGAACTGTAAATTCTACAGT	39	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL,cas9,cas1,cas2,csn2	NA|165aa|up_5|NZ_CP018330.1_9566_10061_+,NA|99aa|up_4|NZ_CP018330.1_10739_11036_+,NA|81aa|up_0|NZ_CP018330.1_16759_17002_+,NA|66aa|down_0|NZ_CP018330.1_19155_19353_+,NA|93aa|down_3|NZ_CP018330.1_20800_21079_-,NA|71aa|down_4|NZ_CP018330.1_21098_21311_-	NA|288aa|up_9|NZ_CP018330.1_4907_5771_-	pfam03609, EII-Sor, PTS system sorbose-specific iic component	NA|165aa|up_8|NZ_CP018330.1_5814_6309_-	pfam03830, PTSIIB_sorb, PTS system sorbose subfamily IIB component	NA|146aa|up_7|NZ_CP018330.1_6321_6759_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|844aa|up_6|NZ_CP018330.1_7042_9574_+	COG3933, COG3933, Transcriptional antiterminator [Transcription]	NA|165aa|up_5|NZ_CP018330.1_9566_10061_+	NA	NA|99aa|up_4|NZ_CP018330.1_10739_11036_+	NA	NA|1110aa|up_3|NZ_CP018330.1_11566_14896_+	cd08997, GH68, Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase	NA|146aa|up_2|NZ_CP018330.1_14907_15345_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|270aa|up_1|NZ_CP018330.1_15946_16756_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|81aa|up_0|NZ_CP018330.1_16759_17002_+	NA	NA|66aa|down_0|NZ_CP018330.1_19155_19353_+	NA	NA|91aa|down_1|NZ_CP018330.1_19612_19885_+	pfam08998, Epsilon_antitox, Bacterial epsilon antitoxin	NA|308aa|down_2|NZ_CP018330.1_19887_20811_+	pfam06414, Zeta_toxin, Zeta toxin	NA|93aa|down_3|NZ_CP018330.1_20800_21079_-	NA	NA|71aa|down_4|NZ_CP018330.1_21098_21311_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
