assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	1	30531-30644	1	PILER-CR	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	TTTTTTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA|34aa|up_7|NZ_CP010177.1_23880_23982_-,NA|310aa|up_5|NZ_CP010177.1_25416_26346_-,NA|135aa|up_3|NZ_CP010177.1_27748_28153_-,NA|251aa|down_7|NZ_CP010177.1_35508_36261_+,NA|72aa|down_8|NZ_CP010177.1_36268_36484_+	NA|57aa|up_9|NZ_CP010177.1_23258_23429_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_8|NZ_CP010177.1_23428_23884_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|34aa|up_7|NZ_CP010177.1_23880_23982_-	NA	NA|410aa|up_6|NZ_CP010177.1_24121_25350_+	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|310aa|up_5|NZ_CP010177.1_25416_26346_-	NA	NA|201aa|up_4|NZ_CP010177.1_26550_27153_-	smart01040, Bro-N, BRO family, N-terminal domain	NA|135aa|up_3|NZ_CP010177.1_27748_28153_-	NA	NA|165aa|up_2|NZ_CP010177.1_28555_29050_-	pfam11319, VasI, Type VI secretion system VasI, EvfG, VC_A0118	NA|58aa|up_1|NZ_CP010177.1_29196_29370_-	pfam01416, PseudoU_synth_1, tRNA pseudouridine synthase	NA|234aa|up_0|NZ_CP010177.1_29366_30068_-	pfam06992, Phage_lambda_P, Replication protein P	NA|180aa|down_0|NZ_CP010177.1_31080_31620_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|77aa|down_1|NZ_CP010177.1_31689_31920_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|down_2|NZ_CP010177.1_32024_32714_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|99aa|down_3|NZ_CP010177.1_33592_33889_+	pfam06064, Gam, Host-nuclease inhibitor protein Gam	NA|262aa|down_4|NZ_CP010177.1_33894_34680_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_5|NZ_CP010177.1_34676_35357_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|53aa|down_6|NZ_CP010177.1_35353_35512_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|251aa|down_7|NZ_CP010177.1_35508_36261_+	NA	NA|72aa|down_8|NZ_CP010177.1_36268_36484_+	NA	NA|73aa|down_9|NZ_CP010177.1_36582_36801_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	2	51859-51955	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|NZ_CP010177.1_43644_44337_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP010177.1_44556_45099_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP010177.1_45579_46446_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP010177.1_46447_46660_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP010177.1_46767_47289_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP010177.1_47324_48710_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP010177.1_48883_49378_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP010177.1_49380_50103_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP010177.1_50220_50730_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP010177.1_50726_51794_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP010177.1_51988_52882_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP010177.1_52878_53694_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP010177.1_53704_54964_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP010177.1_54973_56641_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP010177.1_56957_58007_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP010177.1_58028_59264_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP010177.1_59274_60060_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|382aa|down_7|NZ_CP010177.1_60188_61334_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP010177.1_61355_62657_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP010177.1_62713_64075_-	PRK08044, PRK08044, allantoinase AllB
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	3	563483-563615	2	PILER-CR	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA	NA|126aa|up_9|NZ_CP010177.1_554186_554564_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|NZ_CP010177.1_554570_555413_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|up_7|NZ_CP010177.1_555490_555970_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP010177.1_556161_558024_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP010177.1_558016_558547_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP010177.1_558654_559986_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP010177.1_560044_560332_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP010177.1_560328_561615_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP010177.1_561665_562607_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP010177.1_562621_563392_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP010177.1_563865_565380_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP010177.1_565410_566553_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP010177.1_566680_567898_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP010177.1_567971_569525_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP010177.1_569633_570419_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP010177.1_570424_571015_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP010177.1_571100_571496_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP010177.1_571756_574978_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP010177.1_574995_576144_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP010177.1_576599_577421_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	4	1974801-1974918	2	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA|55aa|down_0|NZ_CP010177.1_1974991_1975156_-	NA|115aa|up_9|NZ_CP010177.1_1962522_1962867_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP010177.1_1963055_1963994_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP010177.1_1964092_1965082_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP010177.1_1965103_1966435_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP010177.1_1966460_1967669_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP010177.1_1967702_1969997_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP010177.1_1970010_1970400_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP010177.1_1970471_1971836_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP010177.1_1972110_1973442_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP010177.1_1973469_1974780_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP010177.1_1974991_1975156_-	NA	NA|234aa|down_1|NZ_CP010177.1_1975178_1975880_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP010177.1_1975984_1976881_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP010177.1_1976931_1977288_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP010177.1_1977529_1977895_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP010177.1_1978187_1979174_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|131aa|down_6|NZ_CP010177.1_1979243_1979636_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP010177.1_1979821_1980121_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP010177.1_1980110_1980515_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP010177.1_1980517_1980823_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	5	2364546-2365550	3,1,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTTCCCCGCGCCAGCGGGGATAAACCG	29,29,27	0	0	NA	NA	I-E:I-E:I-E	16,16,16	16	Unclear	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA|47aa|up_1|NZ_CP010177.1_2363255_2363396_-,NA	NA|434aa|up_9|NZ_CP010177.1_2353952_2355254_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP010177.1_2355301_2357536_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP010177.1_2357613_2357862_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP010177.1_2357861_2358197_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP010177.1_2358267_2359059_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP010177.1_2359286_2360924_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP010177.1_2361011_2362310_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP010177.1_2362369_2363242_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP010177.1_2363255_2363396_-	NA	NA|224aa|up_0|NZ_CP010177.1_2363534_2364206_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP010177.1_2366188_2367667_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP010177.1_2367693_2368971_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP010177.1_2369289_2370075_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP010177.1_2370144_2371599_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP010177.1_2371620_2373030_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP010177.1_2373007_2373787_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP010177.1_2373783_2374644_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP010177.1_2374791_2375367_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP010177.1_2375383_2375644_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP010177.1_2375634_2376906_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	6	2391253-2391890	4,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,10,10	10	TypeI-E	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA	NA|245aa|up_9|NZ_CP010177.1_2381249_2381984_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP010177.1_2382248_2382401_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP010177.1_2382594_2385294_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP010177.1_2385391_2386954_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|180aa|up_5|NZ_CP010177.1_2386950_2387490_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP010177.1_2387501_2388557_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP010177.1_2388567_2389314_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP010177.1_2389295_2389946_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP010177.1_2389942_2390863_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP010177.1_2390862_2391156_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP010177.1_2391971_2393009_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP010177.1_2393260_2394169_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP010177.1_2394170_2395598_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP010177.1_2395597_2396203_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP010177.1_2396252_2396576_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP010177.1_2396769_2397081_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP010177.1_2397099_2397810_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP010177.1_2397809_2398289_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP010177.1_2398285_2399335_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP010177.1_2399315_2400077_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	7	2437383-2437526	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	GGATAAGACGCGCCAGCGTCGCATCCGACATTTTGGGCACAGTAGC	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA	NA|570aa|up_9|NZ_CP010177.1_2426006_2427716_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|181aa|up_8|NZ_CP010177.1_2427725_2428268_+	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|256aa|up_7|NZ_CP010177.1_2428267_2429035_+	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|137aa|up_6|NZ_CP010177.1_2429031_2429442_+	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|157aa|up_5|NZ_CP010177.1_2429434_2429905_+	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|475aa|up_4|NZ_CP010177.1_2430063_2431488_-	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|486aa|up_3|NZ_CP010177.1_2431496_2432954_-	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|337aa|up_2|NZ_CP010177.1_2433213_2434224_+	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|176aa|up_1|NZ_CP010177.1_2434372_2434900_+	PRK10330, PRK10330, electron transport protein HydN	NA|751aa|up_0|NZ_CP010177.1_2435052_2437305_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|378aa|down_0|NZ_CP010177.1_2437530_2438664_-	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|480aa|down_1|NZ_CP010177.1_2438660_2440100_-	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|505aa|down_2|NZ_CP010177.1_2440286_2441801_+	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|322aa|down_3|NZ_CP010177.1_2441797_2442763_-	PRK11543, gutQ, arabinose-5-phosphate isomerase GutQ	NA|258aa|down_4|NZ_CP010177.1_2442755_2443529_-	PRK10434, srlR, DNA-binding transcriptional repressor	NA|120aa|down_5|NZ_CP010177.1_2443595_2443955_-	PRK10234, PRK10234, transcriptional regulator GutM	NA|260aa|down_6|NZ_CP010177.1_2444059_2444839_-	PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional	NA|124aa|down_7|NZ_CP010177.1_2444842_2445214_-	PRK10377, PRK10377, PTS glucitol/sorbitol transporter subunit IIA	NA|320aa|down_8|NZ_CP010177.1_2445224_2446184_-	TIGR00825, EIIBC-GUT, PTS system, glucitol/sorbitol-specific, IIBC component	NA|188aa|down_9|NZ_CP010177.1_2446180_2446744_-	TIGR00821, Glucitol/sorbitol_permease_IIC_component, PTS system, glucitol/sorbitol-specific, IIC component
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	8	3518558-3518681	6	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP010177.1_3527577_3527667_+	NA|471aa|up_9|NZ_CP010177.1_3508011_3509424_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP010177.1_3509980_3510190_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP010177.1_3510645_3511272_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP010177.1_3511292_3513395_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP010177.1_3513407_3514046_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP010177.1_3514109_3514778_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP010177.1_3514774_3515560_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP010177.1_3515563_3516376_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP010177.1_3516387_3517992_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP010177.1_3518117_3518423_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP010177.1_3518995_3520252_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP010177.1_3520292_3521666_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP010177.1_3521880_3522522_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP010177.1_3522561_3523710_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP010177.1_3524000_3525212_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP010177.1_3525324_3526257_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP010177.1_3526253_3527279_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP010177.1_3527577_3527667_+	NA	NA|390aa|down_8|NZ_CP010177.1_3527832_3529002_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP010177.1_3529147_3529729_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	9	4199899-4199990	7	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA|70aa|up_9|NZ_CP010177.1_4189149_4189359_-,NA	NA|70aa|up_9|NZ_CP010177.1_4189149_4189359_-	NA	NA|1321aa|up_8|NZ_CP010177.1_4189413_4193376_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP010177.1_4193415_4194054_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP010177.1_4194341_4195433_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP010177.1_4195432_4196125_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP010177.1_4196136_4196523_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP010177.1_4196530_4197331_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP010177.1_4197340_4197931_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP010177.1_4197941_4198436_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP010177.1_4198456_4199785_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP010177.1_4200413_4201010_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP010177.1_4201030_4201258_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP010177.1_4201295_4202537_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP010177.1_4204345_4205266_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP010177.1_4205265_4205571_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP010177.1_4205663_4206263_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP010177.1_4206259_4208806_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP010177.1_4208805_4209978_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP010177.1_4210117_4210810_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP010177.1_4210782_4211811_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_001900885.1_ASM190088v1	NZ_CP010177	Escherichia coli strain H14 chromosome, complete genome	10	4499991-4500135	8	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4	NA,NA	NA|330aa|up_9|NZ_CP010177.1_4487889_4488879_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP010177.1_4489275_4490184_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP010177.1_4490375_4492397_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP010177.1_4492975_4493653_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP010177.1_4493645_4494401_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP010177.1_4494387_4495542_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP010177.1_4495538_4496579_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP010177.1_4496665_4497955_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP010177.1_4498013_4498490_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP010177.1_4498641_4499925_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP010177.1_4500158_4502420_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP010177.1_4502602_4504036_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP010177.1_4504111_4505164_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP010177.1_4505347_4506301_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP010177.1_4506341_4507337_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP010177.1_4507491_4508310_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP010177.1_4508310_4509369_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP010177.1_4509371_4510061_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP010177.1_4510060_4510834_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP010177.1_4511000_4511150_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
