assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900835.1_ASM190083v1	NZ_CP010172	Escherichia coli strain H8 chromosome, complete genome	1	2186028-2186666	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACCGA,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	30,29,29	0	0	NA	NA	I-E:I-E:I-E	4,10,10	10	Orphan	DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	NA,NA	NA|919aa|up_9|NZ_CP010172.1_2172621_2175378_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP010172.1_2175434_2176736_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP010172.1_2176783_2179018_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP010172.1_2179095_2179344_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP010172.1_2179343_2179679_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP010172.1_2179750_2180542_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP010172.1_2180769_2182407_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP010172.1_2182493_2183792_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP010172.1_2183851_2184724_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP010172.1_2185017_2185689_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP010172.1_2187303_2188782_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP010172.1_2188808_2190086_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP010172.1_2190404_2191190_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP010172.1_2191259_2192714_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP010172.1_2192735_2194145_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP010172.1_2194122_2194902_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP010172.1_2194898_2195759_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|450aa|down_7|NZ_CP010172.1_2195858_2197207_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|192aa|down_8|NZ_CP010172.1_2197341_2197917_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|NZ_CP010172.1_2197933_2198194_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_001900835.1_ASM190083v1	NZ_CP010172	Escherichia coli strain H8 chromosome, complete genome	2	2215153-2215788	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAATCG,GTGTTCCCCGCGCCAGCGGGGATAAA,GTGTTCCCCGCGCCAGCGGGGATAAA	29,26,26	0	0	NA	NA	I-E:I-E:I-E	9,9,10	10	TypeI-E	DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	NA,NA	NA|51aa|up_9|NZ_CP010172.1_2204798_2204951_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_8|NZ_CP010172.1_2205027_2206140_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas3|900aa|up_7|NZ_CP010172.1_2206494_2209194_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP010172.1_2209291_2210854_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP010172.1_2210850_2211387_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP010172.1_2211401_2212457_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP010172.1_2212467_2213214_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP010172.1_2213195_2213846_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP010172.1_2213842_2214766_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP010172.1_2214762_2215056_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP010172.1_2215811_2216849_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP010172.1_2217100_2218009_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP010172.1_2218010_2219438_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP010172.1_2219437_2220043_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP010172.1_2220092_2220416_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP010172.1_2220609_2220921_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP010172.1_2220939_2221650_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP010172.1_2221649_2222129_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP010172.1_2222125_2223175_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP010172.1_2223155_2223917_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001900835.1_ASM190083v1	NZ_CP010172	Escherichia coli strain H8 chromosome, complete genome	3	3237686-3237830	3	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	Orphan	ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	NA|28aa|up_2|NZ_CP010172.1_3235556_3235640_+,NA	NA|372aa|up_9|NZ_CP010172.1_3230312_3231428_+	PRK10245, adrA, diguanylate cyclase AdrA; Provisional	NA|270aa|up_8|NZ_CP010172.1_3231444_3232254_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|153aa|up_7|NZ_CP010172.1_3232373_3232832_+	PRK00124, PRK00124, YaiI/YqxD family protein	NA|175aa|up_6|NZ_CP010172.1_3233014_3233539_+	PRK03731, aroL, shikimate kinase AroL	NA|64aa|up_5|NZ_CP010172.1_3233588_3233780_+	PRK10380, PRK10380, hypothetical protein; Provisional	NA|226aa|up_4|NZ_CP010172.1_3234037_3234715_+	PRK10481, PRK10481, hypothetical protein; Provisional	NA|95aa|up_3|NZ_CP010172.1_3234786_3235071_+	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|28aa|up_2|NZ_CP010172.1_3235556_3235640_+	NA	NA|304aa|up_1|NZ_CP010172.1_3235717_3236629_-	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|303aa|up_0|NZ_CP010172.1_3236753_3237662_+	PRK09557, PRK09557, fructokinase; Reviewed	NA|395aa|down_0|NZ_CP010172.1_3237906_3239091_-	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|1049aa|down_1|NZ_CP010172.1_3239216_3242363_-	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|401aa|down_2|NZ_CP010172.1_3242359_3243562_-	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|230aa|down_3|NZ_CP010172.1_3243751_3244441_+	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|432aa|down_4|NZ_CP010172.1_3244498_3245794_+	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|440aa|down_5|NZ_CP010172.1_3246200_3247520_+	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|458aa|down_6|NZ_CP010172.1_3247595_3248969_+	PRK10580, proY, putative proline-specific permease; Provisional	NA|606aa|down_7|NZ_CP010172.1_3249124_3250942_+	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|194aa|down_8|NZ_CP010172.1_3250946_3251528_-	PRK10045, PRK10045, ACP phosphodiesterase	NA|357aa|down_9|NZ_CP010172.1_3251620_3252691_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
GCF_001900835.1_ASM190083v1	NZ_CP010172	Escherichia coli strain H8 chromosome, complete genome	4	3377875-3377971	4	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DinG	NA,NA	NA|454aa|up_9|NZ_CP010172.1_3365655_3367017_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_CP010172.1_3367073_3368375_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_CP010172.1_3368396_3369542_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_CP010172.1_3369769_3370555_-	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|412aa|up_5|NZ_CP010172.1_3370565_3371801_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_CP010172.1_3371822_3372872_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_CP010172.1_3373188_3374856_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_CP010172.1_3374865_3376125_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_CP010172.1_3376135_3376951_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_CP010172.1_3376947_3377841_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_CP010172.1_3378035_3379103_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_CP010172.1_3379099_3379609_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_CP010172.1_3379726_3380449_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_CP010172.1_3380451_3380946_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_CP010172.1_3381119_3382505_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_CP010172.1_3382540_3383062_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_CP010172.1_3383169_3383382_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_CP010172.1_3383383_3384250_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|181aa|down_8|NZ_CP010172.1_3384720_3385263_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|231aa|down_9|NZ_CP010172.1_3385482_3386175_+	PRK15195, PRK15195, molecular chaperone FimC
