assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	1	1231913-1232612	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	29,29,28	0	0	NA	NA	I-E:I-E:I-E	11,11,9	11	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|47aa|up_1|NZ_CP010163.1_1230622_1230763_-,NA	NA|434aa|up_9|NZ_CP010163.1_1221319_1222621_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP010163.1_1222668_1224903_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP010163.1_1224980_1225229_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP010163.1_1225228_1225564_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP010163.1_1225634_1226426_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP010163.1_1226653_1228291_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP010163.1_1228378_1229677_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP010163.1_1229736_1230609_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP010163.1_1230622_1230763_-	NA	NA|224aa|up_0|NZ_CP010163.1_1230901_1231573_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|426aa|down_0|NZ_CP010163.1_1234755_1236033_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_1|NZ_CP010163.1_1236351_1237137_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_2|NZ_CP010163.1_1237206_1238661_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_3|NZ_CP010163.1_1238682_1240092_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_4|NZ_CP010163.1_1240069_1240849_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_5|NZ_CP010163.1_1241852_1242428_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_6|NZ_CP010163.1_1242444_1242705_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_7|NZ_CP010163.1_1242695_1243967_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|down_8|NZ_CP010163.1_1244044_1244410_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_9|NZ_CP010163.1_1244725_1246525_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	2	1261108-1261624	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,8	8	TypeI-E	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|51aa|up_9|NZ_CP010163.1_1250757_1250910_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_8|NZ_CP010163.1_1251102_1252215_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas3|900aa|up_7|NZ_CP010163.1_1252452_1255152_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP010163.1_1255249_1256812_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP010163.1_1256808_1257345_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP010163.1_1257356_1258412_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP010163.1_1258422_1259169_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP010163.1_1259150_1259801_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP010163.1_1259797_1260721_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP010163.1_1260717_1261011_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP010163.1_1261644_1262682_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP010163.1_1262933_1263842_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP010163.1_1263843_1265271_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP010163.1_1265270_1265876_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP010163.1_1265925_1266249_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP010163.1_1266442_1266754_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP010163.1_1266772_1267483_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP010163.1_1267482_1267962_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP010163.1_1267958_1269008_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP010163.1_1268988_1269750_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	3	1454305-1454426	3	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GCGTCTTATCAGGCCTACAATGTACAGAACC	31	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|271aa|up_9|NZ_CP010163.1_1444822_1445635_-	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs	NA|107aa|up_8|NZ_CP010163.1_1445631_1445952_-	PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional	NA|173aa|up_7|NZ_CP010163.1_1445951_1446470_-	PRK10069, PRK10069, 3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA|454aa|up_6|NZ_CP010163.1_1446466_1447828_-	cd08881, RHO_alpha_C_NDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases	NA|297aa|up_5|NZ_CP010163.1_1447963_1448854_+	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional	NA|380aa|up_4|NZ_CP010163.1_1449013_1450153_+	PRK11128, PRK11128, 3-phenylpropionate MFS transporter	NA|427aa|up_3|NZ_CP010163.1_1450144_1451425_-	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional	NA|285aa|up_2|NZ_CP010163.1_1451615_1452470_-	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|268aa|up_1|NZ_CP010163.1_1452614_1453418_-	PRK10757, PRK10757, inositol-1-monophosphatase	NA|247aa|up_0|NZ_CP010163.1_1453536_1454277_+	PRK15114, PRK15114, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Provisional	NA|163aa|down_0|NZ_CP010163.1_1454637_1455126_+	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR	NA|405aa|down_1|NZ_CP010163.1_1455366_1456581_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|129aa|down_2|NZ_CP010163.1_1456608_1456995_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|108aa|down_3|NZ_CP010163.1_1457011_1457335_+	PRK09502, iscA, iron-sulfur cluster assembly protein IscA	NA|172aa|down_4|NZ_CP010163.1_1457430_1457946_+	PRK05014, hscB, co-chaperone HscB; Provisional	NA|617aa|down_5|NZ_CP010163.1_1457962_1459813_+	PRK05183, hscA, chaperone protein HscA; Provisional	NA|112aa|down_6|NZ_CP010163.1_1459814_1460150_+	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|67aa|down_7|NZ_CP010163.1_1460161_1460362_+	PRK10721, PRK10721, hypothetical protein; Provisional	NA|428aa|down_8|NZ_CP010163.1_1460419_1461703_+	PRK05015, PRK05015, aminopeptidase B; Provisional	NA|259aa|down_9|NZ_CP010163.1_1461844_1462621_+	PRK11611, PRK11611, enhanced serine sensitivity protein SseB; Provisional
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	4	3003269-3003360	4	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|70aa|up_8|NZ_CP010163.1_2992343_2992553_-,NA	NA|503aa|up_9|NZ_CP010163.1_2990676_2992185_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|70aa|up_8|NZ_CP010163.1_2992343_2992553_-	NA	NA|1321aa|up_7|NZ_CP010163.1_2992607_2996570_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_6|NZ_CP010163.1_2996609_2997248_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|231aa|up_5|NZ_CP010163.1_2998627_2999320_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP010163.1_2999331_2999718_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP010163.1_2999725_3000526_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP010163.1_3000535_3001126_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP010163.1_3001136_3001631_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP010163.1_3001651_3002980_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP010163.1_3003783_3004380_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP010163.1_3004400_3004628_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP010163.1_3004847_3006089_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP010163.1_3007899_3008820_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP010163.1_3008819_3009125_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP010163.1_3009276_3009876_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP010163.1_3009872_3012419_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP010163.1_3012418_3013591_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP010163.1_3013720_3014413_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP010163.1_3014385_3015414_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	5	3146605-3146810	5,3,3	CRISPRCasFinder,CRT,PILER-CR	no		c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAACG	28,28,29	0	0	NA	NA	I-F:I-F:I-F	3,3,2	3	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|431aa|up_9|NZ_CP010163.1_3131728_3133021_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP010163.1_3133111_3134455_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP010163.1_3134465_3135077_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1330aa|up_6|NZ_CP010163.1_3135231_3139221_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP010163.1_3139355_3139850_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP010163.1_3140394_3141360_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP010163.1_3141482_3143249_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP010163.1_3143249_3144971_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP010163.1_3145012_3145717_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP010163.1_3146001_3146220_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP010163.1_3147018_3149295_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP010163.1_3149325_3149646_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP010163.1_3149968_3150193_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP010163.1_3150265_3152212_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP010163.1_3152208_3153324_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP010163.1_3153474_3154431_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP010163.1_3154427_3156086_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|300aa|down_7|NZ_CP010163.1_3157700_3158600_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_8|NZ_CP010163.1_3158743_3160396_+	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|323aa|down_9|NZ_CP010163.1_3160407_3161376_+	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	6	3311229-3311373	6	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|62aa|up_3|NZ_CP010163.1_3308241_3308427_-,NA|382aa|down_6|NZ_CP010163.1_3319319_3320465_-,NA|71aa|down_7|NZ_CP010163.1_3320488_3320701_-	NA|430aa|up_9|NZ_CP010163.1_3299724_3301014_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_8|NZ_CP010163.1_3301072_3301549_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|444aa|up_7|NZ_CP010163.1_3302294_3303626_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|195aa|up_6|NZ_CP010163.1_3303699_3304284_-	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|1076aa|up_5|NZ_CP010163.1_3304283_3307511_-	pfam08400, phage_tail_N, Prophage tail fibre N-terminal	NA|200aa|up_4|NZ_CP010163.1_3307575_3308175_-	pfam06316, Ail_Lom, Enterobacterial Ail/Lom protein	NA|62aa|up_3|NZ_CP010163.1_3308241_3308427_-	NA	NA|73aa|up_2|NZ_CP010163.1_3308478_3308697_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP010163.1_3308674_3309745_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP010163.1_3309879_3311163_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|704aa|down_0|NZ_CP010163.1_3311396_3313508_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|66aa|down_1|NZ_CP010163.1_3314309_3314507_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|335aa|down_2|NZ_CP010163.1_3314946_3315951_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|166aa|down_3|NZ_CP010163.1_3316676_3317174_-	pfam06146, PsiE, Phosphate-starvation-inducible E	NA|570aa|down_4|NZ_CP010163.1_3317176_3318886_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|147aa|down_5|NZ_CP010163.1_3318889_3319330_-	PRK10996, PRK10996, thioredoxin 2; Provisional	NA|382aa|down_6|NZ_CP010163.1_3319319_3320465_-	NA	NA|71aa|down_7|NZ_CP010163.1_3320488_3320701_-	NA	NA|950aa|down_8|NZ_CP010163.1_3320700_3323550_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|190aa|down_9|NZ_CP010163.1_3323655_3324225_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	7	3845821-3845917	7	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Unclear	GCCAGCGTCGCATCAGGCATCCGCGCA	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|415aa|up_9|NZ_CP010163.1_3836363_3837608_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_8|NZ_CP010163.1_3837699_3838158_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_7|NZ_CP010163.1_3838418_3839876_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|89aa|up_6|NZ_CP010163.1_3840401_3840668_-	PRK09588, PRK09588, hypothetical protein; Reviewed	NA|151aa|up_5|NZ_CP010163.1_3840901_3841354_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|133aa|up_4|NZ_CP010163.1_3841363_3841762_-	PRK09885, PRK09885, type II toxin-antitoxin system YafO family toxin	NA|98aa|up_3|NZ_CP010163.1_3841764_3842058_-	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN	NA|352aa|up_2|NZ_CP010163.1_3842109_3843165_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|262aa|up_1|NZ_CP010163.1_3843235_3844021_-	PRK06778, PRK06778, hypothetical protein; Validated	NA|580aa|up_0|NZ_CP010163.1_3843965_3845705_+	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|107aa|down_0|NZ_CP010163.1_3845920_3846241_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|258aa|down_1|NZ_CP010163.1_3846593_3847367_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|87aa|down_2|NZ_CP010163.1_3847552_3847813_+	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair]	NA|93aa|down_3|NZ_CP010163.1_3847815_3848094_+	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|247aa|down_4|NZ_CP010163.1_3848249_3848990_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_5|NZ_CP010163.1_3848960_3849728_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|193aa|down_6|NZ_CP010163.1_3849933_3850512_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|815aa|down_7|NZ_CP010163.1_3850751_3853196_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|158aa|down_8|NZ_CP010163.1_3853238_3853712_-	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|257aa|down_9|NZ_CP010163.1_3853865_3854636_+	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional
GCF_001900795.1_ASM190079v1	NZ_CP010163	Escherichia coli strain H2 chromosome, complete genome	8	4058773-4058914	8	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|96aa|up_9|NZ_CP010163.1_4047764_4048052_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP010163.1_4048048_4049335_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP010163.1_4049385_4050327_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP010163.1_4050341_4051112_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP010163.1_4051584_4053099_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP010163.1_4053129_4054272_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP010163.1_4054400_4055618_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP010163.1_4055691_4057245_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP010163.1_4057353_4058139_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP010163.1_4058144_4058735_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP010163.1_4058943_4059339_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP010163.1_4059600_4062822_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP010163.1_4062839_4063988_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP010163.1_4064443_4065265_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP010163.1_4065431_4066346_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP010163.1_4066411_4067362_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP010163.1_4067363_4067813_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP010163.1_4067937_4068432_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP010163.1_4068431_4071248_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP010163.1_4071290_4072232_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_001900795.1_ASM190079v1	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	1	20708-20827	1	CRISPRCasFinder	no	csa3	csa3	Type I-A	TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|28aa|up_6|NZ_CP010164.1_15336_15420_+,NA|94aa|up_3|NZ_CP010164.1_17359_17641_+,NA|326aa|up_2|NZ_CP010164.1_17665_18643_+,NA|119aa|up_1|NZ_CP010164.1_18639_18996_-,NA|65aa|down_2|NZ_CP010164.1_23284_23479_+	NA|235aa|up_9|NZ_CP010164.1_11790_12495_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|378aa|up_8|NZ_CP010164.1_12637_13771_-	COG0701, COG0701, Predicted permeases [General function prediction only]	csa3|108aa|up_7|NZ_CP010164.1_13876_14200_+	pfam12840, HTH_20, Helix-turn-helix domain	NA|28aa|up_6|NZ_CP010164.1_15336_15420_+	NA	NA|215aa|up_5|NZ_CP010164.1_15574_16219_-	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|221aa|up_4|NZ_CP010164.1_16599_17262_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|94aa|up_3|NZ_CP010164.1_17359_17641_+	NA	NA|326aa|up_2|NZ_CP010164.1_17665_18643_+	NA	NA|119aa|up_1|NZ_CP010164.1_18639_18996_-	NA	NA|279aa|up_0|NZ_CP010164.1_19618_20455_-	pfam01051, Rep_3, Initiator Replication protein	NA|84aa|down_0|NZ_CP010164.1_21688_21940_+	PRK02854, PRK02854, primosomal protein DnaT	NA|94aa|down_1|NZ_CP010164.1_21929_22211_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|65aa|down_2|NZ_CP010164.1_23284_23479_+	NA	NA|235aa|down_3|NZ_CP010164.1_24283_24988_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|59aa|down_4|NZ_CP010164.1_25977_26154_-	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain	NA|272aa|down_5|NZ_CP010164.1_26483_27299_+	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|268aa|down_6|NZ_CP010164.1_27359_28163_+	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|279aa|down_7|NZ_CP010164.1_28162_28999_+	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase	NA|NA	NA	NA|NA	NA
