assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900675.1_ASM190067v1	NZ_CP010145	Escherichia coli strain D5 chromosome, complete genome	1	376007-376098	1	CRISPRCasFinder	no		DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	GCATCAGAAGCAGGTAAAAAAGGTGG	26	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|70aa|down_9|NZ_CP010145.1_386637_386847_+	NA|231aa|up_9|NZ_CP010145.1_365197_365890_-	PRK10766, PRK10766, two-component system response regulator TorR	NA|391aa|up_8|NZ_CP010145.1_366019_367192_+	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|849aa|up_7|NZ_CP010145.1_367191_369738_+	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|200aa|up_6|NZ_CP010145.1_369734_370334_+	PRK04976, torD, chaperone protein TorD; Validated	NA|102aa|up_5|NZ_CP010145.1_370426_370732_-	PRK10265, PRK10265, chaperone modulator CbpM	NA|307aa|up_4|NZ_CP010145.1_370731_371652_-	PRK10266, PRK10266, curved DNA-binding protein	NA|420aa|up_3|NZ_CP010145.1_371911_373171_+	PRK09784, PRK09784, YccE family protein	NA|414aa|up_2|NZ_CP010145.1_373459_374701_+	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|76aa|up_1|NZ_CP010145.1_374738_374966_-	PRK10174, PRK10174, hypothetical protein; Provisional	NA|199aa|up_0|NZ_CP010145.1_374986_375583_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|443aa|down_0|NZ_CP010145.1_376211_377540_-	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|165aa|down_1|NZ_CP010145.1_377560_378055_-	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|197aa|down_2|NZ_CP010145.1_378065_378656_-	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|267aa|down_3|NZ_CP010145.1_378665_379466_-	TIGR03611, RutD, pyrimidine utilization protein D	NA|129aa|down_4|NZ_CP010145.1_379473_379860_-	TIGR03610, RutC, pyrimidine utilization protein C	NA|231aa|down_5|NZ_CP010145.1_379871_380564_-	TIGR03614, RutB, pyrimidine utilization protein B	NA|364aa|down_6|NZ_CP010145.1_380563_381655_-	TIGR03612, RutA, pyrimidine utilization protein A	NA|213aa|down_7|NZ_CP010145.1_381942_382581_+	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|1321aa|down_8|NZ_CP010145.1_382620_386583_-	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|70aa|down_9|NZ_CP010145.1_386637_386847_+	NA
GCF_001900675.1_ASM190067v1	NZ_CP010145	Escherichia coli strain D5 chromosome, complete genome	2	2239518-2239974	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,7	7	TypeI-E	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|254aa|up_9|NZ_CP010145.1_2231329_2232091_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP010145.1_2232071_2233121_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP010145.1_2233117_2233597_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP010145.1_2233596_2234307_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP010145.1_2234325_2234637_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP010145.1_2234830_2235154_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP010145.1_2235203_2235809_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP010145.1_2235808_2237236_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP010145.1_2237237_2238146_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP010145.1_2238397_2239435_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP010145.1_2240070_2240364_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP010145.1_2240360_2241284_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP010145.1_2241280_2241931_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP010145.1_2241912_2242659_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP010145.1_2242669_2243725_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP010145.1_2243739_2244276_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP010145.1_2244272_2245835_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP010145.1_2245932_2248632_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP010145.1_2248825_2248978_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP010145.1_2249242_2249977_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_001900675.1_ASM190067v1	NZ_CP010145	Escherichia coli strain D5 chromosome, complete genome	3	2255476-2256297	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,13,12	13	TypeI-E	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|121aa|down_3|NZ_CP010145.1_2259037_2259400_+	cas7|352aa|up_9|NZ_CP010145.1_2242669_2243725_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|up_8|NZ_CP010145.1_2243739_2244276_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|up_7|NZ_CP010145.1_2244272_2245835_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|up_6|NZ_CP010145.1_2245932_2248632_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|up_5|NZ_CP010145.1_2248825_2248978_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|up_4|NZ_CP010145.1_2249242_2249977_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NZ_CP010145.1_2250050_2251763_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_CP010145.1_2251762_2253562_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NZ_CP010145.1_2253880_2254243_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|185aa|up_0|NZ_CP010145.1_2254282_2254837_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP010145.1_2256636_2257308_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|NZ_CP010145.1_2257480_2258083_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|302aa|down_2|NZ_CP010145.1_2258096_2259002_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|121aa|down_3|NZ_CP010145.1_2259037_2259400_+	NA	NA|433aa|down_4|NZ_CP010145.1_2259455_2260754_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_5|NZ_CP010145.1_2260841_2262479_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_6|NZ_CP010145.1_2262706_2263498_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_7|NZ_CP010145.1_2263568_2263904_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_8|NZ_CP010145.1_2263903_2264152_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_9|NZ_CP010145.1_2264229_2266464_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional
