assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	1	294372-294495	1	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|30aa|down_7|NZ_CP010171.1_303391_303481_+	NA|471aa|up_9|NZ_CP010171.1_283825_285238_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP010171.1_285794_286004_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP010171.1_286459_287086_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP010171.1_287106_289209_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP010171.1_289221_289860_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP010171.1_289923_290592_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP010171.1_290588_291374_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP010171.1_291377_292190_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP010171.1_292201_293806_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP010171.1_293931_294237_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP010171.1_294809_296066_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP010171.1_296106_297480_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP010171.1_297694_298336_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP010171.1_298375_299524_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP010171.1_299814_301026_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP010171.1_301138_302071_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP010171.1_302067_303093_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP010171.1_303391_303481_+	NA	NA|390aa|down_8|NZ_CP010171.1_303646_304816_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP010171.1_305050_305632_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	2	1011030-1011121	2	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP010171.1_1000105_1000315_-,NA	NA|70aa|up_9|NZ_CP010171.1_1000105_1000315_-	NA	NA|1321aa|up_8|NZ_CP010171.1_1000369_1004332_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP010171.1_1004371_1005010_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP010171.1_1005297_1006389_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP010171.1_1006388_1007081_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP010171.1_1007092_1007479_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP010171.1_1007486_1008287_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP010171.1_1008296_1008887_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP010171.1_1008897_1009392_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP010171.1_1009412_1010741_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP010171.1_1011544_1012141_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP010171.1_1012161_1012389_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP010171.1_1012426_1013668_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP010171.1_1013954_1014875_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP010171.1_1014874_1015180_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP010171.1_1015331_1015931_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP010171.1_1015927_1018474_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP010171.1_1018473_1019646_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP010171.1_1019775_1020468_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP010171.1_1020440_1021469_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	3	1305830-1305974	3	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|330aa|up_9|NZ_CP010171.1_1293728_1294718_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP010171.1_1295114_1296023_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP010171.1_1296214_1298236_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP010171.1_1298814_1299492_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP010171.1_1299484_1300240_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP010171.1_1300226_1301381_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP010171.1_1301377_1302418_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP010171.1_1302504_1303794_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP010171.1_1303852_1304329_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP010171.1_1304480_1305764_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP010171.1_1305997_1308259_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP010171.1_1308441_1309875_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP010171.1_1309950_1311003_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP010171.1_1311186_1312140_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP010171.1_1312180_1313176_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP010171.1_1313330_1314149_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP010171.1_1314149_1315208_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP010171.1_1315210_1315900_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP010171.1_1315899_1316673_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP010171.1_1316839_1316989_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	4	1540796-1540892	4	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|297aa|up_9|NZ_CP010171.1_1531272_1532163_+	PRK09936, PRK09936, DUF4434 family protein	NA|254aa|up_8|NZ_CP010171.1_1532345_1533107_+	PRK09978, PRK09978, DNA-binding transcriptional regulator GadX; Provisional	NA|289aa|up_7|NZ_CP010171.1_1534516_1535383_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP010171.1_1535384_1535597_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP010171.1_1535704_1536226_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP010171.1_1536261_1537647_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP010171.1_1537820_1538315_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP010171.1_1538317_1539040_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP010171.1_1539157_1539667_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP010171.1_1539663_1540731_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|296aa|down_0|NZ_CP010171.1_1540925_1541813_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP010171.1_1541809_1542625_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP010171.1_1542635_1543895_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP010171.1_1543904_1545572_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP010171.1_1545888_1546938_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP010171.1_1546959_1548195_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP010171.1_1548205_1548991_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP010171.1_1549218_1550364_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP010171.1_1550385_1551687_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|485aa|down_9|NZ_CP010171.1_1553164_1554619_-	PRK11375, PRK11375, putative allantoin permease
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	5	2127039-2127180	5	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|96aa|up_9|NZ_CP010171.1_2116030_2116318_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP010171.1_2116314_2117601_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP010171.1_2117651_2118593_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP010171.1_2118607_2119378_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP010171.1_2119850_2121365_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP010171.1_2121395_2122538_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP010171.1_2122666_2123884_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP010171.1_2123957_2125511_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP010171.1_2125619_2126405_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP010171.1_2126410_2127001_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP010171.1_2127209_2127605_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP010171.1_2127866_2131088_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP010171.1_2131105_2132254_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP010171.1_2132709_2133531_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP010171.1_2133697_2134612_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP010171.1_2134677_2135628_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP010171.1_2135629_2136079_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP010171.1_2136203_2136698_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP010171.1_2136697_2139514_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP010171.1_2139556_2140498_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	6	2300348-2300497	6	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|283aa|up_9|NZ_CP010171.1_2287749_2288598_-	pfam13271, DUF4062, Domain of unknown function (DUF4062)	NA|187aa|up_8|NZ_CP010171.1_2288611_2289172_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|156aa|up_7|NZ_CP010171.1_2289362_2289830_+	COG4333, COG4333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_6|NZ_CP010171.1_2290833_2291166_+	pfam07978, NIPSNAP, NIPSNAP	NA|637aa|up_5|NZ_CP010171.1_2291298_2293209_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|340aa|up_4|NZ_CP010171.1_2293580_2294600_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP010171.1_2294729_2296232_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP010171.1_2296350_2297433_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP010171.1_2297432_2298533_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP010171.1_2298799_2300311_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP010171.1_2300664_2301108_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP010171.1_2301107_2303963_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP010171.1_2304016_2305213_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP010171.1_2305405_2305909_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP010171.1_2305954_2306371_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP010171.1_2306532_2307537_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP010171.1_2309424_2309877_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP010171.1_2310021_2310615_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP010171.1_2310685_2311399_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP010171.1_2311529_2311925_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	7	3542137-3542246	7	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TAGACACTTCCGAGCCGCTGATAATA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|183aa|down_2|NZ_CP010171.1_3546514_3547063_-	NA|524aa|up_9|NZ_CP010171.1_3528995_3530567_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_8|NZ_CP010171.1_3530941_3532276_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_7|NZ_CP010171.1_3532291_3533062_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_6|NZ_CP010171.1_3533091_3533982_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_5|NZ_CP010171.1_3534078_3535224_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|487aa|up_4|NZ_CP010171.1_3535856_3537317_+	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|241aa|up_3|NZ_CP010171.1_3537691_3538414_+	pfam11726, Inovirus_Gp2, Inovirus Gp2	NA|193aa|up_2|NZ_CP010171.1_3538696_3539275_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|557aa|up_1|NZ_CP010171.1_3539715_3541386_+	PRK08026, PRK08026, FliC/FljB family flagellin	NA|175aa|up_0|NZ_CP010171.1_3541466_3541991_+	pfam03614, Flag1_repress, Repressor of phase-1 flagellin	NA|384aa|down_0|NZ_CP010171.1_3543125_3544277_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|396aa|down_1|NZ_CP010171.1_3545315_3546503_-	PRK09716, PRK09716, YhaC family protein	NA|183aa|down_2|NZ_CP010171.1_3546514_3547063_-	NA	NA|115aa|down_3|NZ_CP010171.1_3547318_3547663_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|down_4|NZ_CP010171.1_3547851_3548790_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_5|NZ_CP010171.1_3548888_3549878_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_6|NZ_CP010171.1_3549899_3551231_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_7|NZ_CP010171.1_3551256_3552465_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_8|NZ_CP010171.1_3552498_3554793_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_9|NZ_CP010171.1_3554806_3555196_+	PRK11401, PRK11401, enamine/imine deaminase
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	8	3932443-3932837	1,8,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,29,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|47aa|up_1|NZ_CP010171.1_3931152_3931293_-,NA	NA|434aa|up_9|NZ_CP010171.1_3921849_3923151_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP010171.1_3923198_3925433_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP010171.1_3925510_3925759_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP010171.1_3925758_3926094_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP010171.1_3926164_3926956_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP010171.1_3927183_3928821_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP010171.1_3928908_3930207_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP010171.1_3930266_3931139_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP010171.1_3931152_3931293_-	NA	NA|224aa|up_0|NZ_CP010171.1_3931431_3932103_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP010171.1_3933474_3934953_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP010171.1_3934979_3936257_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP010171.1_3936575_3937361_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP010171.1_3937430_3938885_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP010171.1_3938906_3940316_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP010171.1_3940293_3941073_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP010171.1_3941069_3941930_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP010171.1_3942077_3942653_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP010171.1_3942669_3942930_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP010171.1_3942920_3944192_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	9	3959885-3960462	2,9,2	PILER-CR,CRISPRCasFinder,CRT	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	TypeI-E	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|245aa|up_9|NZ_CP010171.1_3948535_3949270_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP010171.1_3949534_3949687_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_7|NZ_CP010171.1_3949879_3950992_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas8e|521aa|up_6|NZ_CP010171.1_3954026_3955589_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP010171.1_3955585_3956122_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP010171.1_3956133_3957189_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP010171.1_3957199_3957946_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP010171.1_3957927_3958578_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP010171.1_3958574_3959498_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP010171.1_3959494_3959788_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP010171.1_3960544_3961582_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP010171.1_3961833_3962742_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP010171.1_3962743_3964171_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP010171.1_3964170_3964776_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP010171.1_3964825_3965149_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP010171.1_3965342_3965654_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP010171.1_3965672_3966383_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP010171.1_3966382_3966862_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP010171.1_3966858_3967908_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP010171.1_3967888_3968650_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001900455.1_ASM190045v1	NZ_CP010171	Escherichia coli strain H7 chromosome, complete genome	10	4478650-4478765	10	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GAGCCGTAGGCCGGATAAGGCGTTCACGC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|62aa|up_9|NZ_CP010171.1_4467925_4468111_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP010171.1_4468123_4469023_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP010171.1_4469215_4470406_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP010171.1_4470402_4471662_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP010171.1_4471651_4473280_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP010171.1_4473552_4474911_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP010171.1_4474915_4475992_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP010171.1_4476454_4477105_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP010171.1_4477158_4477413_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP010171.1_4477412_4478543_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP010171.1_4478784_4481070_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP010171.1_4481765_4485518_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP010171.1_4485645_4486368_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP010171.1_4486514_4489142_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP010171.1_4489290_4490979_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP010171.1_4490975_4491599_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1505aa|down_6|NZ_CP010171.1_4491622_4496137_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP010171.1_4496137_4497787_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP010171.1_4497791_4498568_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP010171.1_4498641_4499826_-	PRK05790, PRK05790, putative acyltransferase; Provisional
