assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	1	402192-402283	1	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP010150.1_391442_391652_-,NA	NA|70aa|up_9|NZ_CP010150.1_391442_391652_-	NA	NA|1321aa|up_8|NZ_CP010150.1_391706_395669_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP010150.1_395708_396347_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP010150.1_396634_397726_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP010150.1_397725_398418_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP010150.1_398429_398816_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP010150.1_398823_399624_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP010150.1_399633_400224_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP010150.1_400234_400729_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP010150.1_400749_402078_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP010150.1_402706_403303_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP010150.1_403323_403551_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP010150.1_403588_404830_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP010150.1_405122_406379_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP010150.1_406639_407560_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP010150.1_407559_407865_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP010150.1_407957_408557_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP010150.1_408553_411100_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP010150.1_411099_412272_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP010150.1_412401_413094_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	2	544172-544319	2,1	CRISPRCasFinder,PILER-CR	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	ATTTCTAAGCTGCCTGTACGGCAGTGAAC,ATTTCTAAGCTGCCTGTACGGCAGTGAAC	29,29	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|431aa|up_9|NZ_CP010150.1_529036_530329_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP010150.1_530419_531763_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP010150.1_531773_532385_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1382aa|up_6|NZ_CP010150.1_532539_536685_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP010150.1_536819_537314_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP010150.1_537858_538824_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP010150.1_538946_540713_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP010150.1_540713_542435_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP010150.1_542476_543181_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP010150.1_543465_543684_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP010150.1_544530_546807_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP010150.1_546837_547158_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP010150.1_547480_547705_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP010150.1_547777_549724_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP010150.1_549720_550836_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP010150.1_550986_551943_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP010150.1_551939_553598_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP010150.1_554023_554719_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP010150.1_555213_556113_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP010150.1_556256_557909_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	3	703380-703519	3	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	47	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|330aa|up_9|NZ_CP010150.1_691278_692268_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP010150.1_692664_693573_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP010150.1_693764_695786_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP010150.1_696364_697042_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP010150.1_697034_697790_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP010150.1_697776_698931_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP010150.1_698927_699968_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP010150.1_700054_701344_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP010150.1_701402_701879_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP010150.1_702030_703314_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP010150.1_703547_705809_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP010150.1_705991_707425_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP010150.1_707500_708553_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP010150.1_708736_709690_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP010150.1_709730_710726_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP010150.1_710880_711699_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP010150.1_711699_712758_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP010150.1_712760_713450_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP010150.1_713449_714223_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP010150.1_714389_714539_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	4	945174-945270	4	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|231aa|up_9|NZ_CP010150.1_936959_937652_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP010150.1_937871_938414_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP010150.1_938894_939761_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP010150.1_939762_939975_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP010150.1_940082_940604_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP010150.1_940639_942025_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP010150.1_942198_942693_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP010150.1_942695_943418_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP010150.1_943535_944045_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP010150.1_944041_945109_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP010150.1_945313_946207_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP010150.1_946203_947019_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP010150.1_947029_948289_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP010150.1_948298_949966_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP010150.1_950282_951332_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP010150.1_951353_952589_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP010150.1_952599_953385_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|382aa|down_7|NZ_CP010150.1_953612_954758_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP010150.1_954779_956081_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP010150.1_956137_957499_-	PRK08044, PRK08044, allantoinase AllB
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	5	1134415-1134546	5	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	AGGCCTGATAAGTCGCGTCAGCGGCGCATCAGGCATCGG	39	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|82aa|down_4|NZ_CP010150.1_1138496_1138742_-,NA|272aa|down_5|NZ_CP010150.1_1139153_1139969_-,NA|125aa|down_9|NZ_CP010150.1_1144055_1144430_-	NA|361aa|up_9|NZ_CP010150.1_1120998_1122081_+	PRK09526, lacI, lac repressor; Reviewed	NA|1025aa|up_8|NZ_CP010150.1_1122203_1125278_+	PRK09525, lacZ, beta-galactosidase	NA|418aa|up_7|NZ_CP010150.1_1125329_1126583_+	PRK09528, lacY, galactoside permease; Reviewed	NA|394aa|up_6|NZ_CP010150.1_1126661_1127843_-	PRK09705, cynX, putative cyanate transporter; Provisional	NA|157aa|up_5|NZ_CP010150.1_1127848_1128319_-	COG1513, CynS, Cyanate lyase [Inorganic ion transport and metabolism]	NA|220aa|up_4|NZ_CP010150.1_1128349_1129009_-	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|300aa|up_3|NZ_CP010150.1_1129118_1130018_+	PRK11242, PRK11242, DNA-binding transcriptional regulator CynR; Provisional	NA|428aa|up_2|NZ_CP010150.1_1130354_1131638_-	PRK09230, PRK09230, cytosine deaminase; Provisional	NA|420aa|up_1|NZ_CP010150.1_1131627_1132887_-	PRK11017, codB, cytosine permease; Provisional	NA|327aa|up_0|NZ_CP010150.1_1133242_1134223_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|297aa|down_0|NZ_CP010150.1_1134573_1135464_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|529aa|down_1|NZ_CP010150.1_1135702_1137289_+	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional	NA|92aa|down_2|NZ_CP010150.1_1137386_1137662_-	PRK09929, PRK09929, hypothetical protein; Provisional	NA|224aa|down_3|NZ_CP010150.1_1137808_1138480_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|82aa|down_4|NZ_CP010150.1_1138496_1138742_-	NA	NA|272aa|down_5|NZ_CP010150.1_1139153_1139969_-	NA	NA|350aa|down_6|NZ_CP010150.1_1140211_1141261_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|461aa|down_7|NZ_CP010150.1_1141637_1143020_-	PRK06846, PRK06846, putative deaminase; Validated	NA|317aa|down_8|NZ_CP010150.1_1143029_1143980_-	PRK12352, PRK12352, putative carbamate kinase; Reviewed	NA|125aa|down_9|NZ_CP010150.1_1144055_1144430_-	NA
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	6	1200571-1200647	6	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CGATGTAACGAATCGTTACTACC	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|71aa|up_9|NZ_CP010150.1_1193455_1193668_-,NA|344aa|up_8|NZ_CP010150.1_1193819_1194851_-,NA|128aa|up_7|NZ_CP010150.1_1194865_1195249_-,NA|66aa|up_6|NZ_CP010150.1_1195253_1195451_-,NA|103aa|up_5|NZ_CP010150.1_1196436_1196745_-,NA|68aa|up_4|NZ_CP010150.1_1196744_1196948_-,NA|129aa|up_3|NZ_CP010150.1_1196965_1197352_-,NA|90aa|up_2|NZ_CP010150.1_1197448_1197718_-,NA|61aa|up_0|NZ_CP010150.1_1198650_1198833_-,NA	NA|71aa|up_9|NZ_CP010150.1_1193455_1193668_-	NA	NA|344aa|up_8|NZ_CP010150.1_1193819_1194851_-	NA	NA|128aa|up_7|NZ_CP010150.1_1194865_1195249_-	NA	NA|66aa|up_6|NZ_CP010150.1_1195253_1195451_-	NA	NA|103aa|up_5|NZ_CP010150.1_1196436_1196745_-	NA	NA|68aa|up_4|NZ_CP010150.1_1196744_1196948_-	NA	NA|129aa|up_3|NZ_CP010150.1_1196965_1197352_-	NA	NA|90aa|up_2|NZ_CP010150.1_1197448_1197718_-	NA	NA|227aa|up_1|NZ_CP010150.1_1197727_1198408_-	pfam13730, HTH_36, Helix-turn-helix domain	NA|61aa|up_0|NZ_CP010150.1_1198650_1198833_-	NA	NA|418aa|down_0|NZ_CP010150.1_1202730_1203984_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|368aa|down_1|NZ_CP010150.1_1203995_1205099_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|352aa|down_2|NZ_CP010150.1_1205386_1206442_+	PRK10159, PRK10159, phosphoporin PhoE	NA|134aa|down_3|NZ_CP010150.1_1206480_1206882_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|down_4|NZ_CP010150.1_1206939_1208184_-	PRK05077, frsA, esterase FrsA	NA|153aa|down_5|NZ_CP010150.1_1208275_1208734_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|down_6|NZ_CP010150.1_1208994_1210452_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|205aa|down_7|NZ_CP010150.1_1210508_1211123_-	PRK08179, prfH, peptide chain release factor-like protein; Reviewed	NA|380aa|down_8|NZ_CP010150.1_1211119_1212259_-	PRK09588, PRK09588, hypothetical protein; Reviewed	NA|151aa|down_9|NZ_CP010150.1_1212504_1212957_-	PRK09831, PRK09831, GNAT family N-acetyltransferase
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	7	1228381-1228474	7	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GGGGACTGATTTGTGCGCGTTGTTACATCG	30	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|326aa|up_5|NZ_CP010150.1_1222701_1223679_-,NA|310aa|down_9|NZ_CP010150.1_1234765_1235695_+	NA|131aa|up_9|NZ_CP010150.1_1218466_1218859_-	pfam02561, FliS, Flagellar protein FliS	NA|439aa|up_8|NZ_CP010150.1_1218881_1220198_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|305aa|up_7|NZ_CP010150.1_1220404_1221319_-	NF033376, flg_lateral_LafA, lateral flagellin LafA	NA|281aa|up_6|NZ_CP010150.1_1221804_1222647_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|326aa|up_5|NZ_CP010150.1_1222701_1223679_-	NA	NA|310aa|up_4|NZ_CP010150.1_1223695_1224625_-	PRK07192, flgL, flagellar hook-associated protein FlgL; Reviewed	NA|459aa|up_3|NZ_CP010150.1_1224639_1226016_-	PRK07191, flgK, flagellar hook-associated protein FlgK; Validated	NA|100aa|up_2|NZ_CP010150.1_1226198_1226498_-	PRK12708, flgJ, peptidoglycan hydrolase; Reviewed	NA|367aa|up_1|NZ_CP010150.1_1226497_1227598_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|222aa|up_0|NZ_CP010150.1_1227612_1228278_-	PRK12407, flgH, flagellar basal body L-ring protein FlgH	NA|262aa|down_0|NZ_CP010150.1_1228549_1229335_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|246aa|down_1|NZ_CP010150.1_1229513_1230251_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|401aa|down_2|NZ_CP010150.1_1230250_1231453_-	PRK06803, flgE, flagellar basal body protein FlaE	NA|238aa|down_3|NZ_CP010150.1_1231537_1232251_-	PRK09619, flgD, flagellar hook assembly protein FlgD	NA|144aa|down_4|NZ_CP010150.1_1232250_1232682_-	PRK06802, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|112aa|down_5|NZ_CP010150.1_1232684_1233020_-	PRK12685, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|246aa|down_6|NZ_CP010150.1_1233101_1233839_+	PRK06804, flgA, flagellar basal body P-ring formation protein FlgA	NA|93aa|down_7|NZ_CP010150.1_1233919_1234198_+	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM	NA|143aa|down_8|NZ_CP010150.1_1234210_1234639_+	pfam05130, FlgN, FlgN protein	NA|310aa|down_9|NZ_CP010150.1_1234765_1235695_+	NA
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	8	3426487-3427430	8,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,TCCCCGCGCCAGCGGGGATAAACCG	29,29,25	0	0	NA	NA	I-E:I-E:I-E	15,15,15	15	Unclear	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|47aa|up_1|NZ_CP010150.1_3425196_3425337_-,NA	NA|434aa|up_9|NZ_CP010150.1_3415893_3417195_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP010150.1_3417242_3419477_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP010150.1_3419554_3419803_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP010150.1_3419802_3420138_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP010150.1_3420208_3421000_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP010150.1_3421227_3422865_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP010150.1_3422952_3424251_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP010150.1_3424310_3425183_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP010150.1_3425196_3425337_-	NA	NA|224aa|up_0|NZ_CP010150.1_3425475_3426147_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP010150.1_3428068_3429547_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP010150.1_3429573_3430851_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP010150.1_3431169_3431955_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP010150.1_3432024_3433479_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP010150.1_3433500_3434910_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP010150.1_3434887_3435667_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP010150.1_3435630_3436524_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP010150.1_3436671_3437247_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP010150.1_3437263_3437524_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP010150.1_3437514_3438786_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	9	3453130-3455049	3,9,2,4	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGNCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG	28,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	20,31,30,20	31	TypeI-E	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|245aa|up_9|NZ_CP010150.1_3443129_3443864_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP010150.1_3444128_3444281_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP010150.1_3444474_3447174_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP010150.1_3447271_3448834_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP010150.1_3448830_3449367_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP010150.1_3449378_3450434_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP010150.1_3450444_3451191_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP010150.1_3451172_3451823_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP010150.1_3451819_3452743_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP010150.1_3452739_3453033_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP010150.1_3455069_3456107_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP010150.1_3456358_3457267_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP010150.1_3457268_3458696_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP010150.1_3458695_3459301_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP010150.1_3459350_3459674_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP010150.1_3459867_3460179_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP010150.1_3460197_3460908_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP010150.1_3460907_3461387_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP010150.1_3461383_3462433_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP010150.1_3462413_3463175_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	10	4596711-4596834	10	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|30aa|down_7|NZ_CP010150.1_4605730_4605820_+	NA|471aa|up_9|NZ_CP010150.1_4586164_4587577_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP010150.1_4588133_4588343_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP010150.1_4588798_4589425_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP010150.1_4589445_4591548_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP010150.1_4591560_4592199_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP010150.1_4592262_4592931_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP010150.1_4592927_4593713_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP010150.1_4593716_4594529_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP010150.1_4594540_4596145_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP010150.1_4596270_4596576_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP010150.1_4597148_4598405_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP010150.1_4598445_4599819_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP010150.1_4600033_4600675_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP010150.1_4600714_4601863_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP010150.1_4602153_4603365_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP010150.1_4603477_4604410_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP010150.1_4604406_4605432_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP010150.1_4605730_4605820_+	NA	NA|390aa|down_8|NZ_CP010150.1_4605985_4607155_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP010150.1_4607300_4607882_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_001900375.1_ASM190037v1	NZ_CP010150	Escherichia coli strain D7 chromosome, complete genome	11	4634236-4634367	11	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGC	36	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|110aa|up_9|NZ_CP010150.1_4624865_4625195_+	PRK11372, PRK11372, C-type lysozyme inhibitor	NA|219aa|up_8|NZ_CP010150.1_4625253_4625910_+	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase	NA|425aa|up_7|NZ_CP010150.1_4626038_4627313_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|287aa|up_6|NZ_CP010150.1_4627374_4628235_+	PRK05756, PRK05756, pyridoxal kinase PdxY	NA|202aa|up_5|NZ_CP010150.1_4628278_4628884_-	PRK10542, PRK10542, glutathionine S-transferase; Provisional	NA|501aa|up_4|NZ_CP010150.1_4628989_4630492_-	PRK09584, tppB, dipeptide/tripeptide permease DtpA	NA|212aa|up_3|NZ_CP010150.1_4631102_4631738_-	PRK10702, PRK10702, endonuclease III; Provisional	NA|232aa|up_2|NZ_CP010150.1_4631737_4632433_-	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional	NA|207aa|up_1|NZ_CP010150.1_4632436_4633057_-	PRK01908, PRK01908, electron transport complex protein RnfG; Validated	NA|353aa|up_0|NZ_CP010150.1_4633060_4634119_-	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed	NA|193aa|down_0|NZ_CP010150.1_4636048_4636627_-	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional	NA|194aa|down_1|NZ_CP010150.1_4636626_4637208_-	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional	NA|147aa|down_2|NZ_CP010150.1_4637284_4637725_-	pfam10754, DUF2569, Protein of unknown function (DUF2569)	NA|72aa|down_3|NZ_CP010150.1_4637810_4638026_-	PRK10391, PRK10391, transcription modulator YdgT	NA|42aa|down_4|NZ_CP010150.1_4638298_4638424_-	NF033231, small_Blr, division septum protein Blr	NA|347aa|down_5|NZ_CP010150.1_4638666_4639707_+	PRK11579, PRK11579, putative oxidoreductase; Provisional	NA|334aa|down_6|NZ_CP010150.1_4639741_4640743_-	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|391aa|down_7|NZ_CP010150.1_4640846_4642019_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|531aa|down_8|NZ_CP010150.1_4642028_4643621_-	PRK10110, PRK10110, PTS maltose transporter subunit IICB	NA|343aa|down_9|NZ_CP010150.1_4643795_4644824_+	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional
