assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900335.1_ASM190033v1	NZ_CP010132	Escherichia coli strain C10 chromosome, complete genome	1	251285-251424	1	CRISPRCasFinder	no		PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	Orphan	TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAA	49	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	NA,NA	NA|252aa|up_9|NZ_CP010132.1_240556_241312_+	PRK09762, PRK09762, galactosamine-6-phosphate isomerase; Provisional	NA|195aa|up_8|NZ_CP010132.1_241711_242296_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|232aa|up_7|NZ_CP010132.1_242375_243071_+	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|839aa|up_6|NZ_CP010132.1_243100_245617_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|364aa|up_5|NZ_CP010132.1_245627_246719_+	pfam00419, Fimbrial, Fimbrial protein	NA|287aa|up_4|NZ_CP010132.1_246761_247622_-	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|679aa|up_3|NZ_CP010132.1_247686_249723_+	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|132aa|up_2|NZ_CP010132.1_249680_250076_+	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein	NA|197aa|up_1|NZ_CP010132.1_250095_250686_+	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|192aa|up_0|NZ_CP010132.1_250695_251271_+	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|347aa|down_0|NZ_CP010132.1_251475_252516_-	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|212aa|down_1|NZ_CP010132.1_252588_253224_-	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|173aa|down_2|NZ_CP010132.1_253351_253870_+	TIGR01382, Uncharacterized_protein_MJ0967, intracellular protease, PfpI family	NA|148aa|down_3|NZ_CP010132.1_253849_254293_-	PRK03467, PRK03467, hypothetical protein; Provisional	NA|101aa|down_4|NZ_CP010132.1_254343_254646_+	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|168aa|down_5|NZ_CP010132.1_254632_255136_-	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|175aa|down_6|NZ_CP010132.1_255129_255654_-	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|332aa|down_7|NZ_CP010132.1_255862_256858_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|293aa|down_8|NZ_CP010132.1_256866_257745_+	PRK15447, PRK15447, putative protease; Provisional	NA|336aa|down_9|NZ_CP010132.1_257825_258833_+	PRK10508, PRK10508, luciferase-like monooxygenase
GCF_001900335.1_ASM190033v1	NZ_CP010132	Escherichia coli strain C10 chromosome, complete genome	2	1757091-1757206	2	CRISPRCasFinder	no		PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	Orphan	GATAAGACGCGCCAGCGTCGCATCAGGCGTT	31	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	NA,NA	NA|126aa|up_9|NZ_CP010132.1_1743095_1743473_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|274aa|up_8|NZ_CP010132.1_1743475_1744297_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|330aa|up_7|NZ_CP010132.1_1744293_1745283_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|429aa|up_6|NZ_CP010132.1_1745282_1746569_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|785aa|up_5|NZ_CP010132.1_1746621_1748976_-	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|272aa|up_4|NZ_CP010132.1_1749230_1750046_+	PRK09430, djlA, co-chaperone DjlA	NA|220aa|up_3|NZ_CP010132.1_1750162_1750822_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|969aa|up_2|NZ_CP010132.1_1750833_1753740_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|784aa|up_1|NZ_CP010132.1_1753904_1756256_-	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|232aa|up_0|NZ_CP010132.1_1756330_1757026_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|501aa|down_0|NZ_CP010132.1_1757225_1758728_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|567aa|down_1|NZ_CP010132.1_1758738_1760439_-	PRK04123, PRK04123, ribulokinase; Provisional	NA|293aa|down_2|NZ_CP010132.1_1760776_1761655_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|255aa|down_3|NZ_CP010132.1_1761740_1762505_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|233aa|down_4|NZ_CP010132.1_1762606_1763305_-	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|537aa|down_5|NZ_CP010132.1_1763288_1764899_-	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|328aa|down_6|NZ_CP010132.1_1764874_1765858_-	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|552aa|down_7|NZ_CP010132.1_1766021_1767677_-	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|44aa|down_8|NZ_CP010132.1_1767765_1767897_+	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|393aa|down_9|NZ_CP010132.1_1767998_1769177_+	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter
GCF_001900335.1_ASM190033v1	NZ_CP010132	Escherichia coli strain C10 chromosome, complete genome	3	2645863-2646011	3	CRISPRCasFinder	no		PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	Orphan	GTTCACTGCCGTACAGGCAGCTTAGAAAT	29	0	0	NA	NA	I-F	2	2	Orphan	PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	NA,NA	NA|551aa|up_9|NZ_CP010132.1_2632272_2633925_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NZ_CP010132.1_2634068_2634968_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NZ_CP010132.1_2635462_2636158_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NZ_CP010132.1_2636583_2638242_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NZ_CP010132.1_2638238_2639195_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NZ_CP010132.1_2639345_2640461_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP010132.1_2640457_2642404_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NZ_CP010132.1_2642476_2642701_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NZ_CP010132.1_2643023_2643344_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NZ_CP010132.1_2643374_2645651_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|down_0|NZ_CP010132.1_2646394_2646613_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP010132.1_2646897_2647602_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP010132.1_2647643_2649365_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP010132.1_2649365_2651132_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|NZ_CP010132.1_2651254_2652220_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP010132.1_2652763_2653258_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1356aa|down_6|NZ_CP010132.1_2653392_2657460_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NZ_CP010132.1_2657614_2658226_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP010132.1_2658236_2659580_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP010132.1_2659670_2660963_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
GCF_001900335.1_ASM190033v1	NZ_CP010132	Escherichia coli strain C10 chromosome, complete genome	4	4692322-4692716	1,1,4	CRT,PILER-CR,CRISPRCasFinder	no		PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	6,5,5	6	Orphan	PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	NA,NA	NA|254aa|up_9|NZ_CP010132.1_4684195_4684957_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP010132.1_4684937_4685987_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP010132.1_4685983_4686463_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP010132.1_4686462_4687173_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP010132.1_4687191_4687503_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP010132.1_4687696_4688020_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP010132.1_4688069_4688675_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP010132.1_4688674_4690102_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP010132.1_4690103_4691012_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP010132.1_4691263_4692301_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|51aa|down_0|NZ_CP010132.1_4694104_4694257_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_1|NZ_CP010132.1_4694521_4695256_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_2|NZ_CP010132.1_4695330_4697043_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_3|NZ_CP010132.1_4697042_4698842_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|down_4|NZ_CP010132.1_4699160_4699523_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|424aa|down_5|NZ_CP010132.1_4699600_4700872_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|down_6|NZ_CP010132.1_4700862_4701123_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|down_7|NZ_CP010132.1_4701139_4701715_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|down_8|NZ_CP010132.1_4701862_4702723_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|down_9|NZ_CP010132.1_4702719_4703499_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]
GCF_001900335.1_ASM190033v1	NZ_CP010132	Escherichia coli strain C10 chromosome, complete genome	5	4710956-4711289	5,2,2	CRISPRCasFinder,CRT,PILER-CR	no		PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Orphan	PD-DExK,csa3,cas3,WYL,DEDDh,c2c9_V-U4,PrimPol,DinG	NA,NA|47aa|down_1|NZ_CP010132.1_4712438_4712579_+	NA|424aa|up_9|NZ_CP010132.1_4699600_4700872_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP010132.1_4700862_4701123_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP010132.1_4701139_4701715_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP010132.1_4701862_4702723_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP010132.1_4702719_4703499_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NZ_CP010132.1_4703476_4704886_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP010132.1_4704907_4706362_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP010132.1_4706431_4707217_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP010132.1_4707535_4708813_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP010132.1_4708839_4710318_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP010132.1_4711628_4712300_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP010132.1_4712438_4712579_+	NA	NA|291aa|down_2|NZ_CP010132.1_4712592_4713465_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|NZ_CP010132.1_4713524_4714823_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP010132.1_4714910_4716548_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP010132.1_4716775_4717567_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP010132.1_4717637_4717973_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP010132.1_4717972_4718221_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP010132.1_4718298_4720533_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP010132.1_4720580_4721882_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
