assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001887695.1_ASM188769v1	NZ_CP017637	Bradyrhizobium japonicum strain J5, complete genome	1	4843583-4843739	1	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL,PD-DExK	Orphan	GCCGTCGCAACAGCCGCCTCCGCAA	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,RT,WYL,PD-DExK	NA|62aa|up_7|NZ_CP017637.1_4835352_4835538_-,NA|125aa|up_5|NZ_CP017637.1_4837447_4837822_+,NA|133aa|down_0|NZ_CP017637.1_4844481_4844880_-,NA|50aa|down_1|NZ_CP017637.1_4844869_4845019_+,NA|65aa|down_2|NZ_CP017637.1_4845166_4845361_+,NA|64aa|down_6|NZ_CP017637.1_4847713_4847905_+	NA|210aa|up_9|NZ_CP017637.1_4833153_4833783_-	COG5588, COG5588, Uncharacterized conserved protein [Function unknown]	NA|422aa|up_8|NZ_CP017637.1_4834041_4835307_+	cd00519, Lipase_3, Lipase (class 3)	NA|62aa|up_7|NZ_CP017637.1_4835352_4835538_-	NA	NA|405aa|up_6|NZ_CP017637.1_4835534_4836749_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|125aa|up_5|NZ_CP017637.1_4837447_4837822_+	NA	NA|446aa|up_4|NZ_CP017637.1_4837825_4839163_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|269aa|up_3|NZ_CP017637.1_4839324_4840131_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|474aa|up_2|NZ_CP017637.1_4840213_4841635_+	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|112aa|up_1|NZ_CP017637.1_4841886_4842222_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|273aa|up_0|NZ_CP017637.1_4842367_4843186_+	cd19140, AKR_AKR3F3, Sinorhizobium meliloti isatin reductase and similar proteins	NA|133aa|down_0|NZ_CP017637.1_4844481_4844880_-	NA	NA|50aa|down_1|NZ_CP017637.1_4844869_4845019_+	NA	NA|65aa|down_2|NZ_CP017637.1_4845166_4845361_+	NA	NA|239aa|down_3|NZ_CP017637.1_4845546_4846263_-	pfam04654, DUF599, Protein of unknown function, DUF599	NA|221aa|down_4|NZ_CP017637.1_4846387_4847050_+	cd03194, GST_C_3, C-terminal, alpha helical domain of an unknown subfamily 3 of Glutathione S-transferases	NA|123aa|down_5|NZ_CP017637.1_4847139_4847508_+	COG3753, COG3753, Uncharacterized protein conserved in bacteria [Function unknown]	NA|64aa|down_6|NZ_CP017637.1_4847713_4847905_+	NA	NA|329aa|down_7|NZ_CP017637.1_4848062_4849049_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|147aa|down_8|NZ_CP017637.1_4849092_4849533_+	pfam07370, DUF1489, Protein of unknown function (DUF1489)	NA|250aa|down_9|NZ_CP017637.1_4849542_4850292_-	COG3904, COG3904, Predicted periplasmic protein [Function unknown]
GCF_001887695.1_ASM188769v1	NZ_CP017637	Bradyrhizobium japonicum strain J5, complete genome	2	6475335-6475987	2,1	CRISPRCasFinder,CRT	no		DEDDh,csa3,RT,WYL,PD-DExK	Orphan	AGCACGGCCGGCAGCGCCACCATCA,AGNACGGCNGGCAGCGCCACCATCA	25,25	0	0	NA	NA	NA:NA	10,6	10	Orphan	DEDDh,csa3,RT,WYL,PD-DExK	NA|68aa|up_9|NZ_CP017637.1_6461908_6462112_+,NA|114aa|up_7|NZ_CP017637.1_6463713_6464055_+,NA|98aa|down_8|NZ_CP017637.1_6488724_6489018_+	NA|68aa|up_9|NZ_CP017637.1_6461908_6462112_+	NA	NA|210aa|up_8|NZ_CP017637.1_6462746_6463376_-	COG4318, COG4318, Uncharacterized protein conserved in bacteria [Function unknown]	NA|114aa|up_7|NZ_CP017637.1_6463713_6464055_+	NA	NA|96aa|up_6|NZ_CP017637.1_6464263_6464551_+	PRK06508, PRK06508, acyl carrier protein; Provisional	NA|157aa|up_5|NZ_CP017637.1_6464561_6465032_+	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|402aa|up_4|NZ_CP017637.1_6465028_6466234_+	PRK06519, PRK06519, beta-ketoacyl-ACP synthase	NA|426aa|up_3|NZ_CP017637.1_6466281_6467559_+	PRK06501, PRK06501, beta-ketoacyl-ACP synthase	NA|311aa|up_2|NZ_CP017637.1_6467567_6468500_+	PRK06553, PRK06553, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|269aa|up_1|NZ_CP017637.1_6468726_6469533_-	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]	NA|578aa|up_0|NZ_CP017637.1_6469687_6471421_-	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|371aa|down_0|NZ_CP017637.1_6478766_6479879_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|394aa|down_1|NZ_CP017637.1_6479884_6481066_-	PRK08912, PRK08912, aminotransferase	NA|109aa|down_2|NZ_CP017637.1_6481073_6481400_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|643aa|down_3|NZ_CP017637.1_6481704_6483633_-	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	NA|633aa|down_4|NZ_CP017637.1_6483773_6485672_-	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	NA|277aa|down_5|NZ_CP017637.1_6485945_6486776_-	COG1360, MotB, Flagellar motor protein [Cell motility and secretion]	NA|258aa|down_6|NZ_CP017637.1_6486799_6487573_-	PRK08990, PRK08990, flagellar motor protein PomA; Reviewed	NA|286aa|down_7|NZ_CP017637.1_6487799_6488657_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|98aa|down_8|NZ_CP017637.1_6488724_6489018_+	NA	NA|240aa|down_9|NZ_CP017637.1_6489034_6489754_-	cd16841, RraA_family, ribonuclease activity regulator RraA family
GCF_001887695.1_ASM188769v1	NZ_CP017637	Bradyrhizobium japonicum strain J5, complete genome	3	6476073-6476217	3	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL,PD-DExK	Orphan	AGCACGGCCGGCAGCGCCACCATCA	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,RT,WYL,PD-DExK	NA|68aa|up_9|NZ_CP017637.1_6461908_6462112_+,NA|114aa|up_7|NZ_CP017637.1_6463713_6464055_+,NA|98aa|down_8|NZ_CP017637.1_6488724_6489018_+	NA|68aa|up_9|NZ_CP017637.1_6461908_6462112_+	NA	NA|210aa|up_8|NZ_CP017637.1_6462746_6463376_-	COG4318, COG4318, Uncharacterized protein conserved in bacteria [Function unknown]	NA|114aa|up_7|NZ_CP017637.1_6463713_6464055_+	NA	NA|96aa|up_6|NZ_CP017637.1_6464263_6464551_+	PRK06508, PRK06508, acyl carrier protein; Provisional	NA|157aa|up_5|NZ_CP017637.1_6464561_6465032_+	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|402aa|up_4|NZ_CP017637.1_6465028_6466234_+	PRK06519, PRK06519, beta-ketoacyl-ACP synthase	NA|426aa|up_3|NZ_CP017637.1_6466281_6467559_+	PRK06501, PRK06501, beta-ketoacyl-ACP synthase	NA|311aa|up_2|NZ_CP017637.1_6467567_6468500_+	PRK06553, PRK06553, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|269aa|up_1|NZ_CP017637.1_6468726_6469533_-	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]	NA|578aa|up_0|NZ_CP017637.1_6469687_6471421_-	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|371aa|down_0|NZ_CP017637.1_6478766_6479879_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|394aa|down_1|NZ_CP017637.1_6479884_6481066_-	PRK08912, PRK08912, aminotransferase	NA|109aa|down_2|NZ_CP017637.1_6481073_6481400_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|643aa|down_3|NZ_CP017637.1_6481704_6483633_-	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	NA|633aa|down_4|NZ_CP017637.1_6483773_6485672_-	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	NA|277aa|down_5|NZ_CP017637.1_6485945_6486776_-	COG1360, MotB, Flagellar motor protein [Cell motility and secretion]	NA|258aa|down_6|NZ_CP017637.1_6486799_6487573_-	PRK08990, PRK08990, flagellar motor protein PomA; Reviewed	NA|286aa|down_7|NZ_CP017637.1_6487799_6488657_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|98aa|down_8|NZ_CP017637.1_6488724_6489018_+	NA	NA|240aa|down_9|NZ_CP017637.1_6489034_6489754_-	cd16841, RraA_family, ribonuclease activity regulator RraA family
