assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001887555.1_ASM188755v1	NZ_CP016910	Burkholderia pseudomallei strain Burk178-Type1 chromosome 2, complete sequence	1	779353-779495	1	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCTAACCGCTAACCGCTAACCGCTAACCGCT	31	1	22	779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464	NZ_CP016909.1_1281812-1281836|NZ_CP016909.1_1281819-1281843|NZ_CP016909.1_1281826-1281850|NZ_CP016909.1_1281833-1281857|NZ_CP016909.1_1281840-1281864|NZ_CP016909.1_1281847-1281871|NZ_CP016909.1_1281854-1281878|NZ_CP016909.1_1281861-1281885|NZ_CP016909.1_1281868-1281892|NZ_CP016909.1_1281875-1281899|NZ_CP016909.1_1281882-1281906|NZ_CP016909.1_1281889-1281913|NZ_CP016909.1_1281896-1281920|NZ_CP016909.1_1281903-1281927|NZ_CP016909.1_1281910-1281934|NZ_CP016909.1_1281917-1281941|NZ_CP016909.1_1281924-1281948|NZ_CP016909.1_1281931-1281955|NZ_CP016909.1_1281938-1281962|NZ_CP016909.1_1281952-1281976|NZ_CP016909.1_1281945-1281969|NZ_CP016909.1_1281959-1281983	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|43aa|up_9|NZ_CP016910.1_766350_766479_+,NA|64aa|up_5|NZ_CP016910.1_770822_771014_+,NA	NA|43aa|up_9|NZ_CP016910.1_766350_766479_+	NA	NA|440aa|up_8|NZ_CP016910.1_766486_767806_+	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|529aa|up_7|NZ_CP016910.1_767802_769389_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|332aa|up_6|NZ_CP016910.1_769701_770697_+	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase	NA|64aa|up_5|NZ_CP016910.1_770822_771014_+	NA	NA|528aa|up_4|NZ_CP016910.1_771010_772594_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|418aa|up_3|NZ_CP016910.1_773332_774586_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|422aa|up_2|NZ_CP016910.1_775099_776365_-	cd18622, GH32_Inu-like, glycoside hydrolase family 32 protein such as Aspergillus ficuum endo-inulinase (Inu2)	NA|522aa|up_1|NZ_CP016910.1_776497_778063_-	pfam02435, Glyco_hydro_68, Levansucrase/Invertase	NA|339aa|up_0|NZ_CP016910.1_778251_779268_+	cd20010, PBP1_AglR-like, Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) and similar proteins	NA|400aa|down_0|NZ_CP016910.1_779757_780957_+	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent	NA|342aa|down_1|NZ_CP016910.1_781134_782160_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|425aa|down_2|NZ_CP016910.1_782592_783867_+	PRK13034, PRK13034, serine hydroxymethyltransferase; Reviewed	NA|324aa|down_3|NZ_CP016910.1_783939_784911_+	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|178aa|down_4|NZ_CP016910.1_785061_785595_+	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|688aa|down_5|NZ_CP016910.1_785655_787719_+	cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3	NA|642aa|down_6|NZ_CP016910.1_787721_789647_+	pfam11982, DUF3483, Domain of unknown function (DUF3483)	NA|391aa|down_7|NZ_CP016910.1_789651_790824_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|262aa|down_8|NZ_CP016910.1_790820_791606_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|423aa|down_9|NZ_CP016910.1_791630_792899_+	cd08884, RHO_alpha_C_GbcA-like, C-terminal catalytic domain of GbcA (glycine betaine catabolism A) from Pseudomonas aeruginosa PAO1 and related aromatic ring hydroxylating dioxygenases
GCF_001887555.1_ASM188755v1	NZ_CP016910	Burkholderia pseudomallei strain Burk178-Type1 chromosome 2, complete sequence	2	1440479-1440643	1	PILER-CR	no		cas3,DinG,csa3	Orphan	GCGAGCGCGGCGAGCGCGGCCGCG	24	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|77aa|up_4|NZ_CP016910.1_1434457_1434688_+,NA|143aa|down_2|NZ_CP016910.1_1444238_1444667_-,NA|84aa|down_4|NZ_CP016910.1_1445855_1446107_-,NA|83aa|down_7|NZ_CP016910.1_1449629_1449878_-,NA|67aa|down_8|NZ_CP016910.1_1450324_1450525_-	NA|53aa|up_9|NZ_CP016910.1_1431283_1431442_+	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|174aa|up_8|NZ_CP016910.1_1431457_1431979_+	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional	NA|275aa|up_7|NZ_CP016910.1_1431975_1432800_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|329aa|up_6|NZ_CP016910.1_1432857_1433844_+	pfam04264, YceI, YceI-like domain	NA|120aa|up_5|NZ_CP016910.1_1433883_1434243_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|77aa|up_4|NZ_CP016910.1_1434457_1434688_+	NA	NA|170aa|up_3|NZ_CP016910.1_1434709_1435219_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|335aa|up_2|NZ_CP016910.1_1435215_1436220_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|822aa|up_1|NZ_CP016910.1_1436538_1439004_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|327aa|up_0|NZ_CP016910.1_1439222_1440203_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|609aa|down_0|NZ_CP016910.1_1441277_1443104_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|350aa|down_1|NZ_CP016910.1_1443100_1444150_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|143aa|down_2|NZ_CP016910.1_1444238_1444667_-	NA	NA|247aa|down_3|NZ_CP016910.1_1444781_1445522_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|84aa|down_4|NZ_CP016910.1_1445855_1446107_-	NA	NA|420aa|down_5|NZ_CP016910.1_1446269_1447529_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|488aa|down_6|NZ_CP016910.1_1447748_1449212_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|83aa|down_7|NZ_CP016910.1_1449629_1449878_-	NA	NA|67aa|down_8|NZ_CP016910.1_1450324_1450525_-	NA	NA|91aa|down_9|NZ_CP016910.1_1450517_1450790_+	pfam13663, DUF4148, Domain of unknown function (DUF4148)
GCF_001887555.1_ASM188755v1	NZ_CP016910	Burkholderia pseudomallei strain Burk178-Type1 chromosome 2, complete sequence	3	2727004-2727096	2	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCGCGTCGGCGCGCGCGGCGGCGA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|53aa|up_6|NZ_CP016910.1_2718963_2719122_+,NA|170aa|up_4|NZ_CP016910.1_2721319_2721829_+,NA|168aa|up_3|NZ_CP016910.1_2721886_2722390_-,NA|86aa|down_5|NZ_CP016910.1_2731220_2731478_+,NA|57aa|down_9|NZ_CP016910.1_2736101_2736272_-	NA|1083aa|up_9|NZ_CP016910.1_2712496_2715745_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|375aa|up_8|NZ_CP016910.1_2715747_2716872_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|612aa|up_7|NZ_CP016910.1_2717021_2718857_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|53aa|up_6|NZ_CP016910.1_2718963_2719122_+	NA	NA|522aa|up_5|NZ_CP016910.1_2719213_2720779_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|170aa|up_4|NZ_CP016910.1_2721319_2721829_+	NA	NA|168aa|up_3|NZ_CP016910.1_2721886_2722390_-	NA	NA|342aa|up_2|NZ_CP016910.1_2722466_2723492_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|283aa|up_1|NZ_CP016910.1_2723710_2724559_-	pfam00231, ATP-synt, ATP synthase	NA|671aa|up_0|NZ_CP016910.1_2724555_2726568_-	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|83aa|down_0|NZ_CP016910.1_2727314_2727563_-	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|234aa|down_1|NZ_CP016910.1_2727559_2728261_-	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|103aa|down_2|NZ_CP016910.1_2728257_2728566_-	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|167aa|down_3|NZ_CP016910.1_2728558_2729059_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|152aa|down_4|NZ_CP016910.1_2729055_2729511_-	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|86aa|down_5|NZ_CP016910.1_2731220_2731478_+	NA	NA|598aa|down_6|NZ_CP016910.1_2731609_2733403_+	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|477aa|down_7|NZ_CP016910.1_2733386_2734817_+	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|393aa|down_8|NZ_CP016910.1_2734813_2735992_+	PRK07058, PRK07058, acetate/propionate family kinase	NA|57aa|down_9|NZ_CP016910.1_2736101_2736272_-	NA
GCF_001887555.1_ASM188755v1	NZ_CP016910	Burkholderia pseudomallei strain Burk178-Type1 chromosome 2, complete sequence	4	3134173-3134318	2,3	PILER-CR,CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCGAAG,CGGAATGCCCGATCATCGGGATGC	53,24	0	0	NA	NA	NA:NA	2,1	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|75aa|up_9|NZ_CP016910.1_3123465_3123690_-,NA|97aa|up_8|NZ_CP016910.1_3123668_3123959_+,NA|37aa|up_5|NZ_CP016910.1_3126669_3126780_-,NA|144aa|up_3|NZ_CP016910.1_3128017_3128449_+,NA	NA|75aa|up_9|NZ_CP016910.1_3123465_3123690_-	NA	NA|97aa|up_8|NZ_CP016910.1_3123668_3123959_+	NA	NA|147aa|up_7|NZ_CP016910.1_3124718_3125159_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_6|NZ_CP016910.1_3125493_3126609_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|37aa|up_5|NZ_CP016910.1_3126669_3126780_-	NA	NA|312aa|up_4|NZ_CP016910.1_3126906_3127842_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|144aa|up_3|NZ_CP016910.1_3128017_3128449_+	NA	NA|553aa|up_2|NZ_CP016910.1_3128748_3130407_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP016910.1_3130690_3132964_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP016910.1_3133096_3133492_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP016910.1_3134894_3136160_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|595aa|down_1|NZ_CP016910.1_3136475_3138260_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP016910.1_3138334_3140146_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|152aa|down_3|NZ_CP016910.1_3140162_3140618_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|344aa|down_4|NZ_CP016910.1_3140715_3141747_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_5|NZ_CP016910.1_3141743_3143576_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|150aa|down_6|NZ_CP016910.1_3144032_3144482_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP016910.1_3144922_3145576_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP016910.1_3145643_3146078_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|376aa|down_9|NZ_CP016910.1_3146494_3147622_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_001887555.1_ASM188755v1	NZ_CP016909	Burkholderia pseudomallei strain Burk178-Type1 chromosome 1, complete sequence	1	4021918-4021997	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,DinG,RT	Orphan	ACGGAATGGGCCCCGGCATGATG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|95aa|up_5|NZ_CP016909.1_4014731_4015016_+,NA|183aa|down_0|NZ_CP016909.1_4022976_4023525_+,NA|84aa|down_1|NZ_CP016909.1_4023540_4023792_+,NA|115aa|down_8|NZ_CP016909.1_4030786_4031131_-	NA|881aa|up_9|NZ_CP016909.1_4007292_4009935_-	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|377aa|up_8|NZ_CP016909.1_4009931_4011062_-	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|374aa|up_7|NZ_CP016909.1_4012432_4013553_+	pfam13683, rve_3, Integrase core domain	NA|161aa|up_6|NZ_CP016909.1_4014252_4014735_+	pfam10908, DUF2778, Protein of unknown function (DUF2778)	NA|95aa|up_5|NZ_CP016909.1_4014731_4015016_+	NA	NA|354aa|up_4|NZ_CP016909.1_4015089_4016151_-	PHA02536, Q, portal vertex protein; Provisional	NA|292aa|up_3|NZ_CP016909.1_4017449_4018325_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|371aa|up_2|NZ_CP016909.1_4018335_4019448_-	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII	NA|365aa|up_1|NZ_CP016909.1_4019476_4020571_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|323aa|up_0|NZ_CP016909.1_4020713_4021682_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|183aa|down_0|NZ_CP016909.1_4022976_4023525_+	NA	NA|84aa|down_1|NZ_CP016909.1_4023540_4023792_+	NA	NA|483aa|down_2|NZ_CP016909.1_4023788_4025237_+	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain	NA|534aa|down_3|NZ_CP016909.1_4025255_4026857_-	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|314aa|down_4|NZ_CP016909.1_4027027_4027969_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|365aa|down_5|NZ_CP016909.1_4027965_4029060_-	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA|139aa|down_6|NZ_CP016909.1_4029461_4029878_+	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins	NA|185aa|down_7|NZ_CP016909.1_4030018_4030573_-	pfam07152, YaeQ, YaeQ protein	NA|115aa|down_8|NZ_CP016909.1_4030786_4031131_-	NA	NA|187aa|down_9|NZ_CP016909.1_4031619_4032180_-	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional
