assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	1	307307-307506	1	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	TGCAAGTTGGCGGGGCCCCAACACAGAAGCT	31	2	2	307338-307362|307394-307418	NZ_CP013218.1_307507-307531|NZ_CP013218.1_2182305-2182329	NA	3	3	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA,NA|131aa|down_5|NZ_CP013218.1_312682_313075_+	NA|574aa|up_9|NZ_CP013218.1_294753_296475_+	pfam18674, TarS_C1, TarS beta-glycosyltransferase C-terminal domain 1	NA|225aa|up_8|NZ_CP013218.1_296618_297293_+	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA	NA|585aa|up_7|NZ_CP013218.1_297539_299294_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|247aa|up_6|NZ_CP013218.1_299296_300037_+	PRK14084, PRK14084, DNA-binding response regulator	NA|148aa|up_5|NZ_CP013218.1_300149_300593_+	PRK04125, PRK04125, antiholin-like protein LrgA	NA|234aa|up_4|NZ_CP013218.1_300585_301287_+	PRK04288, PRK04288, antiholin-like protein LrgB; Provisional	NA|764aa|up_3|NZ_CP013218.1_301627_303919_+	COG3256, NorB, Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]	NA|235aa|up_2|NZ_CP013218.1_304144_304849_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|264aa|up_1|NZ_CP013218.1_304997_305789_+	COG2190, NagE, Phosphotransferase system IIA components [Carbohydrate transport and metabolism]	NA|479aa|up_0|NZ_CP013218.1_305804_307241_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|254aa|down_0|NZ_CP013218.1_307816_308578_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|305aa|down_1|NZ_CP013218.1_308829_309744_-	TIGR02152, Putative_ribokinase, ribokinase	NA|135aa|down_2|NZ_CP013218.1_309771_310176_-	PRK11797, PRK11797, D-ribose pyranase; Provisional	NA|294aa|down_3|NZ_CP013218.1_310190_311072_-	pfam06800, Sugar_transport, Sugar transport protein	NA|333aa|down_4|NZ_CP013218.1_311303_312302_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|131aa|down_5|NZ_CP013218.1_312682_313075_+	NA	NA|459aa|down_6|NZ_CP013218.1_313203_314580_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|331aa|down_7|NZ_CP013218.1_314813_315806_+	COG3049, COG3049, Penicillin V acylase and related amidases [Cell envelope biogenesis, outer membrane]	NA|317aa|down_8|NZ_CP013218.1_316131_317082_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|220aa|down_9|NZ_CP013218.1_317133_317793_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	2	660707-660815	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	AAAGGAACGCAGTTGGATGCTACCGCACAACTGCATAAA	39	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA,NA|169aa|down_4|NZ_CP013218.1_664548_665055_+,NA|239aa|down_5|NZ_CP013218.1_665216_665933_+	NA|209aa|up_9|NZ_CP013218.1_650211_650838_+	pfam04276, DUF443, Protein of unknown function (DUF443)	NA|313aa|up_8|NZ_CP013218.1_651107_652046_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|up_7|NZ_CP013218.1_652491_653028_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_6|NZ_CP013218.1_653197_653674_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_5|NZ_CP013218.1_653713_655009_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_4|NZ_CP013218.1_655036_655558_+	pfam08741, YwhD, YwhD family	NA|337aa|up_3|NZ_CP013218.1_656056_657067_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|139aa|up_2|NZ_CP013218.1_657342_657759_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_1|NZ_CP013218.1_657755_659417_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|up_0|NZ_CP013218.1_659901_660537_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|296aa|down_0|NZ_CP013218.1_660866_661754_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|NZ_CP013218.1_661904_662855_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|NZ_CP013218.1_662909_663629_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|NZ_CP013218.1_663612_664413_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|NZ_CP013218.1_664548_665055_+	NA	NA|239aa|down_5|NZ_CP013218.1_665216_665933_+	NA	NA|263aa|down_6|NZ_CP013218.1_666101_666890_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|NZ_CP013218.1_667141_667516_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|NZ_CP013218.1_668463_669393_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|NZ_CP013218.1_669585_669810_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	3	822855-822937	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	CACCCCAACTCGCATTGCTTGTAGAA	26	1	26	822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911|822881-822911	NZ_CP013218.1_917169-917139|NZ_CP013218.1_955970-956000|NZ_CP013218.1_2037165-2037195|NZ_CP013218.1_2037275-2037305|NZ_CP013218.1_2096482-2096512|NZ_CP013218.1_289319-289349|NZ_CP013218.1_289377-289407|NZ_CP013218.1_289435-289465|NZ_CP013218.1_383119-383089|NZ_CP013218.1_652204-652174|NZ_CP013218.1_776568-776538|NZ_CP013218.1_867800-867830|NZ_CP013218.1_1055488-1055518|NZ_CP013218.1_1155815-1155785|NZ_CP013218.1_1155869-1155839|NZ_CP013218.1_1803688-1803658|NZ_CP013218.1_1894466-1894436|NZ_CP013218.1_2345728-2345758|NZ_CP013218.1_2390797-2390767|NZ_CP013218.1_831862-831892|NZ_CP013218.1_871938-871908|NZ_CP013218.1_1365835-1365865|NZ_CP013218.1_1411924-1411954|NZ_CP013218.1_1711215-1711245|NZ_CP013218.1_2356476-2356506|NZ_CP013218.1_2791782-2791812	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA,NA	NA|280aa|up_9|NZ_CP013218.1_810104_810944_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_8|NZ_CP013218.1_811117_811768_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_7|NZ_CP013218.1_811764_812001_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_6|NZ_CP013218.1_812269_814255_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_5|NZ_CP013218.1_814262_817109_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|up_4|NZ_CP013218.1_817718_818651_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|up_3|NZ_CP013218.1_818656_819496_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|up_2|NZ_CP013218.1_819503_819989_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_1|NZ_CP013218.1_819996_821436_+	sd00006, TPR, Tetratricopeptide repeat	NA|312aa|up_0|NZ_CP013218.1_821502_822438_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_0|NZ_CP013218.1_823205_824117_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_1|NZ_CP013218.1_824113_825109_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_2|NZ_CP013218.1_825217_826162_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_3|NZ_CP013218.1_826731_827319_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|545aa|down_4|NZ_CP013218.1_827501_829136_+	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase	NA|301aa|down_5|NZ_CP013218.1_829342_830245_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_6|NZ_CP013218.1_830947_831577_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_7|NZ_CP013218.1_832351_833365_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_8|NZ_CP013218.1_833417_834428_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_9|NZ_CP013218.1_834566_835757_+	PRK00073, pgk, phosphoglycerate kinase; Provisional
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	4	872207-872287	4	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	TCTTTATCATTTCTGTCCCACTCCC	25	1	1	872232-872262	NZ_CP013218.1_817308-817278	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA,NA|105aa|down_7|NZ_CP013218.1_879893_880208_-	NA|180aa|up_9|NZ_CP013218.1_864337_864877_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_8|NZ_CP013218.1_865026_865347_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_7|NZ_CP013218.1_865490_865847_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_6|NZ_CP013218.1_866004_866385_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_5|NZ_CP013218.1_866564_867443_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|up_4|NZ_CP013218.1_868144_868531_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|up_3|NZ_CP013218.1_868523_868820_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|up_2|NZ_CP013218.1_869069_870095_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|up_1|NZ_CP013218.1_870087_870783_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|up_0|NZ_CP013218.1_870800_871622_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_0|NZ_CP013218.1_872429_872624_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_1|NZ_CP013218.1_872857_873709_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_2|NZ_CP013218.1_874036_874798_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_3|NZ_CP013218.1_874896_876204_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_4|NZ_CP013218.1_876309_877560_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|155aa|down_5|NZ_CP013218.1_877549_878014_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|466aa|down_6|NZ_CP013218.1_878164_879562_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|105aa|down_7|NZ_CP013218.1_879893_880208_-	NA	NA|347aa|down_8|NZ_CP013218.1_880576_881617_+	COG4536, CorB, Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]	NA|356aa|down_9|NZ_CP013218.1_881630_882698_+	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	5	1711143-1711233	5	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	CATTGCCTGTAGAATTTCTTTACGAAATTCTCT	33	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA,NA|49aa|down_3|NZ_CP013218.1_1715257_1715404_-,NA|43aa|down_8|NZ_CP013218.1_1718440_1718569_-	NA|208aa|up_9|NZ_CP013218.1_1699910_1700534_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|423aa|up_8|NZ_CP013218.1_1700533_1701802_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|308aa|up_7|NZ_CP013218.1_1701813_1702737_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|213aa|up_6|NZ_CP013218.1_1702739_1703378_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|103aa|up_5|NZ_CP013218.1_1703662_1703971_-	PRK13678, PRK13678, hypothetical protein; Provisional	NA|143aa|up_4|NZ_CP013218.1_1703985_1704414_-	COG0816, COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B	NA|87aa|up_3|NZ_CP013218.1_1704417_1704678_-	PRK05473, IreB-like, IreB family regulatory phosphoprotein	NA|877aa|up_2|NZ_CP013218.1_1704740_1707371_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|826aa|up_1|NZ_CP013218.1_1707713_1710191_-	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|223aa|up_0|NZ_CP013218.1_1710192_1710861_-	sd00006, TPR, Tetratricopeptide repeat	NA|373aa|down_0|NZ_CP013218.1_1711435_1712554_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|381aa|down_1|NZ_CP013218.1_1712554_1713697_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|338aa|down_2|NZ_CP013218.1_1714007_1715021_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|49aa|down_3|NZ_CP013218.1_1715257_1715404_-	NA	NA|61aa|down_4|NZ_CP013218.1_1715443_1715626_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|141aa|down_5|NZ_CP013218.1_1715725_1716148_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|425aa|down_6|NZ_CP013218.1_1716232_1717507_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|258aa|down_7|NZ_CP013218.1_1717667_1718441_-	COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]	NA|43aa|down_8|NZ_CP013218.1_1718440_1718569_-	NA	NA|589aa|down_9|NZ_CP013218.1_1718901_1720668_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	6	1806121-1806203	6	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	GAAGCTGACGAAAAAGTCAGCTTAC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA,NA	NA|454aa|up_9|NZ_CP013218.1_1790954_1792316_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|586aa|up_8|NZ_CP013218.1_1792659_1794417_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|323aa|up_7|NZ_CP013218.1_1794438_1795407_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|315aa|up_6|NZ_CP013218.1_1795675_1796620_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|286aa|up_5|NZ_CP013218.1_1796619_1797477_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|410aa|up_4|NZ_CP013218.1_1797671_1798901_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|1066aa|up_3|NZ_CP013218.1_1799349_1802547_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|314aa|up_2|NZ_CP013218.1_1802567_1803509_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|433aa|up_1|NZ_CP013218.1_1803878_1805177_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|138aa|up_0|NZ_CP013218.1_1805381_1805795_+	pfam00582, Usp, Universal stress protein family	NA|230aa|down_0|NZ_CP013218.1_1806300_1806990_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|352aa|down_1|NZ_CP013218.1_1807164_1808220_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|373aa|down_2|NZ_CP013218.1_1808535_1809654_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|167aa|down_3|NZ_CP013218.1_1809794_1810295_+	pfam00582, Usp, Universal stress protein family	NA|401aa|down_4|NZ_CP013218.1_1810541_1811744_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|316aa|down_5|NZ_CP013218.1_1811831_1812779_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|165aa|down_6|NZ_CP013218.1_1812901_1813396_-	PRK00522, tpx, thiol peroxidase	NA|257aa|down_7|NZ_CP013218.1_1813493_1814264_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|408aa|down_8|NZ_CP013218.1_1814307_1815531_-	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional	NA|383aa|down_9|NZ_CP013218.1_1815530_1816679_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	7	1894475-1894568	7	CRISPRCasFinder	no	csa3	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Type I-A	GCAATGCGCGTTGGGGTGTGGGGCCCCAACATAG	34	1	1	1894509-1894534	NZ_CP013218.1_2037237-2037212	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|75aa|up_5|NZ_CP013218.1_1890568_1890793_-,NA|148aa|up_2|NZ_CP013218.1_1892004_1892448_-,NA|101aa|down_1|NZ_CP013218.1_1895702_1896005_+	NA|501aa|up_9|NZ_CP013218.1_1885600_1887103_-	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|105aa|up_8|NZ_CP013218.1_1887745_1888060_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|431aa|up_7|NZ_CP013218.1_1888059_1889352_+	PRK15445, PRK15445, arsenical efflux pump membrane protein ArsB	NA|285aa|up_6|NZ_CP013218.1_1889438_1890293_-	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|75aa|up_5|NZ_CP013218.1_1890568_1890793_-	NA	NA|157aa|up_4|NZ_CP013218.1_1890991_1891462_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|148aa|up_3|NZ_CP013218.1_1891574_1892018_+	pfam06338, ComK, ComK protein	NA|148aa|up_2|NZ_CP013218.1_1892004_1892448_-	NA	NA|212aa|up_1|NZ_CP013218.1_1892745_1893381_+	pfam02517, Abi, CAAX protease self-immunity	NA|207aa|up_0|NZ_CP013218.1_1893547_1894168_+	pfam02517, Abi, CAAX protease self-immunity	NA|238aa|down_0|NZ_CP013218.1_1894730_1895444_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|101aa|down_1|NZ_CP013218.1_1895702_1896005_+	NA	NA|122aa|down_2|NZ_CP013218.1_1896259_1896625_+	PRK14201, PRK14201, fluoride efflux transporter CrcB	NA|118aa|down_3|NZ_CP013218.1_1896621_1896975_+	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|278aa|down_4|NZ_CP013218.1_1897224_1898058_-	COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]	NA|303aa|down_5|NZ_CP013218.1_1898269_1899178_-	pfam08378, NERD, Nuclease-related domain	NA|398aa|down_6|NZ_CP013218.1_1899302_1900496_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|531aa|down_7|NZ_CP013218.1_1900867_1902460_+	cd00484, PEPCK_ATP, Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis	NA|249aa|down_8|NZ_CP013218.1_1902756_1903503_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|158aa|down_9|NZ_CP013218.1_1903507_1903981_-	TIGR02705, conserved_hypothetical_protein, nucleoside triphosphatase YtkD
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	8	2171231-2171443	8	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	TGATGTGCTGTTGTGGAAGCTTGGTGTCGTGCCATGCTACTTTGATG	47	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|46aa|up_4|NZ_CP013218.1_2168092_2168230_-,NA|107aa|down_0|NZ_CP013218.1_2171476_2171797_+	NA|232aa|up_9|NZ_CP013218.1_2160784_2161480_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|507aa|up_8|NZ_CP013218.1_2161832_2163353_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|452aa|up_7|NZ_CP013218.1_2163868_2165224_-	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]	NA|357aa|up_6|NZ_CP013218.1_2165238_2166309_-	PRK01966, ddl, D-alanine--D-alanine ligase	NA|401aa|up_5|NZ_CP013218.1_2166626_2167829_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|46aa|up_4|NZ_CP013218.1_2168092_2168230_-	NA	NA|70aa|up_3|NZ_CP013218.1_2168357_2168567_-	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|98aa|up_2|NZ_CP013218.1_2168578_2168872_-	cd10152, SaCsoR-like_DUF156, Staphylococcus aureus copper-sensitive operon repressor (CsoR), and related domains; this family was previously known as part of DUF156	NA|495aa|up_1|NZ_CP013218.1_2169037_2170522_+	TIGR04265, bac_cardiolipin, cardiolipin synthase	NA|216aa|up_0|NZ_CP013218.1_2170549_2171197_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|107aa|down_0|NZ_CP013218.1_2171476_2171797_+	NA	NA|291aa|down_1|NZ_CP013218.1_2173438_2174311_-	PRK02463, PRK02463, OxaA-like protein precursor; Provisional	NA|214aa|down_2|NZ_CP013218.1_2174396_2175038_-	PRK00043, thiE, thiamine phosphate synthase	NA|264aa|down_3|NZ_CP013218.1_2175039_2175831_-	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|277aa|down_4|NZ_CP013218.1_2175814_2176645_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|230aa|down_5|NZ_CP013218.1_2176637_2177327_-	TIGR04306, salvage_TenA, thiaminase II	NA|232aa|down_6|NZ_CP013218.1_2177713_2178409_-	pfam06737, Transglycosylas, Transglycosylase-like domain	NA|132aa|down_7|NZ_CP013218.1_2178797_2179193_-	pfam00436, SSB, Single-strand binding protein family	NA|147aa|down_8|NZ_CP013218.1_2179386_2179827_+	pfam14183, YwpF, YwpF-like protein	NA|147aa|down_9|NZ_CP013218.1_2179883_2180324_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	9	2226862-2227012	9	CRISPRCasFinder	no	csa3,TnsE_C	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|77aa|up_5|NZ_CP013218.1_2221734_2221965_-,NA|364aa|up_0|NZ_CP013218.1_2225752_2226844_+,NA|35aa|down_0|NZ_CP013218.1_2227341_2227446_-,NA|53aa|down_2|NZ_CP013218.1_2228125_2228284_+,NA|31aa|down_3|NZ_CP013218.1_2228719_2228812_+	NA|237aa|up_9|NZ_CP013218.1_2217344_2218055_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP013218.1_2218175_2218619_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP013218.1_2218818_2219232_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP013218.1_2219689_2221063_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP013218.1_2221734_2221965_-	NA	NA|313aa|up_4|NZ_CP013218.1_2221995_2222934_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP013218.1_2223367_2224033_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP013218.1_2224184_2224505_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP013218.1_2224506_2225487_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP013218.1_2225752_2226844_+	NA	NA|35aa|down_0|NZ_CP013218.1_2227341_2227446_-	NA	NA|57aa|down_1|NZ_CP013218.1_2227962_2228133_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|53aa|down_2|NZ_CP013218.1_2228125_2228284_+	NA	NA|31aa|down_3|NZ_CP013218.1_2228719_2228812_+	NA	NA|286aa|down_4|NZ_CP013218.1_2228941_2229799_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_5|NZ_CP013218.1_2229866_2230649_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|203aa|down_6|NZ_CP013218.1_2230938_2231547_-	pfam08937, DUF1863, MTH538 TIR-like domain (DUF1863)	NA|345aa|down_7|NZ_CP013218.1_2231574_2232609_-	pfam13676, TIR_2, TIR domain	NA|490aa|down_8|NZ_CP013218.1_2232702_2234172_-	pfam18185, STALD, Sir2- and TIR-associating SLOG family	NA|97aa|down_9|NZ_CP013218.1_2234231_2234522_-	pfam11867, DUF3387, Domain of unknown function (DUF3387)
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	10	2390849-2390934	10	CRISPRCasFinder	no	WYL	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Unclear	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	6	2390879-2390904|2390879-2390904|2390879-2390904|2390879-2390904|2390879-2390904|2390879-2390904	NZ_CP013218.1_867889-867864|NZ_CP013218.1_872009-872034|NZ_CP013218.1_916944-916969|NZ_CP013218.1_1361506-1361531|NZ_CP013218.1_2182343-2182368|NZ_CP013218.1_2522795-2522770	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|65aa|up_6|NZ_CP013218.1_2383593_2383788_-,NA|78aa|down_1|NZ_CP013218.1_2391884_2392118_-,NA|110aa|down_8|NZ_CP013218.1_2400206_2400536_+	NA|248aa|up_9|NZ_CP013218.1_2379381_2380125_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|652aa|up_8|NZ_CP013218.1_2380150_2382106_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|270aa|up_7|NZ_CP013218.1_2382715_2383525_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|65aa|up_6|NZ_CP013218.1_2383593_2383788_-	NA	NA|467aa|up_5|NZ_CP013218.1_2383961_2385362_-	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC	NA|361aa|up_4|NZ_CP013218.1_2385456_2386539_-	pfam02317, Octopine_DH, NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain	NA|141aa|up_3|NZ_CP013218.1_2386786_2387209_+	COG3296, COG3296, Uncharacterized protein conserved in bacteria [Function unknown]	NA|167aa|up_2|NZ_CP013218.1_2387445_2387946_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|318aa|up_1|NZ_CP013218.1_2388308_2389262_+	cd12178, 2-Hacid_dh_13, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains	NA|375aa|up_0|NZ_CP013218.1_2389353_2390478_-	PRK06753, PRK06753, hypothetical protein; Provisional	NA|259aa|down_0|NZ_CP013218.1_2391086_2391863_-	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|78aa|down_1|NZ_CP013218.1_2391884_2392118_-	NA	NA|158aa|down_2|NZ_CP013218.1_2392412_2392886_-	COG2427, COG2427, Uncharacterized conserved protein [Function unknown]	NA|985aa|down_3|NZ_CP013218.1_2392885_2395840_-	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only]	NA|316aa|down_4|NZ_CP013218.1_2396441_2397389_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|266aa|down_5|NZ_CP013218.1_2397521_2398319_-	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]	WYL|231aa|down_6|NZ_CP013218.1_2398703_2399396_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|246aa|down_7|NZ_CP013218.1_2399420_2400158_-	pfam02517, Abi, CAAX protease self-immunity	NA|110aa|down_8|NZ_CP013218.1_2400206_2400536_+	NA	NA|291aa|down_9|NZ_CP013218.1_2400980_2401853_+	COG1737, RpiR, Transcriptional regulators [Transcription]
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	11	2567058-2567152	11	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	AGGCTCTTATGCAGTTGGTGCGAAGCAA	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|249aa|up_9|NZ_CP013218.1_2556643_2557390_+,NA|121aa|down_0|NZ_CP013218.1_2567820_2568183_-,NA|105aa|down_8|NZ_CP013218.1_2574995_2575310_+	NA|249aa|up_9|NZ_CP013218.1_2556643_2557390_+	NA	NA|398aa|up_8|NZ_CP013218.1_2557613_2558807_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|250aa|up_7|NZ_CP013218.1_2558818_2559568_-	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|up_6|NZ_CP013218.1_2559560_2560376_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|290aa|up_5|NZ_CP013218.1_2560372_2561242_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|312aa|up_4|NZ_CP013218.1_2561238_2562174_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|533aa|up_3|NZ_CP013218.1_2562186_2563785_-	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|434aa|up_2|NZ_CP013218.1_2563927_2565229_-	COG4408, COG4408, Uncharacterized protein conserved in bacteria [Function unknown]	NA|273aa|up_1|NZ_CP013218.1_2565221_2566040_-	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|274aa|up_0|NZ_CP013218.1_2566050_2566872_-	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]	NA|121aa|down_0|NZ_CP013218.1_2567820_2568183_-	NA	NA|273aa|down_1|NZ_CP013218.1_2568445_2569264_-	PRK08589, PRK08589, SDR family oxidoreductase	NA|513aa|down_2|NZ_CP013218.1_2569497_2571036_+	pfam03806, ABG_transport, AbgT putative transporter family	NA|141aa|down_3|NZ_CP013218.1_2571147_2571570_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|133aa|down_4|NZ_CP013218.1_2572041_2572440_-	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|137aa|down_5|NZ_CP013218.1_2572466_2572877_-	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|128aa|down_6|NZ_CP013218.1_2573331_2573715_-	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|403aa|down_7|NZ_CP013218.1_2573781_2574990_+	cd07657, F-BAR_Fes_Fer, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma) and Fer (Fes related) tyrosine kinases	NA|105aa|down_8|NZ_CP013218.1_2574995_2575310_+	NA	NA|140aa|down_9|NZ_CP013218.1_2577186_2577606_-	pfam07252, DUF1433, Protein of unknown function (DUF1433)
GCF_001887075.1_ASM188707v1	NZ_CP013218	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 chromosome, complete genome	12	2595003-2595113	12	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,TnsE_C	Orphan	GGTACTTCTGGTGTCGGTGGCGTTGGT	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|89aa|up_3|NZ_CP013218.1_2589306_2589573_+,NA|103aa|up_2|NZ_CP013218.1_2589716_2590025_+,NA	NA|262aa|up_9|NZ_CP013218.1_2582052_2582838_-	pfam04507, DUF576, Csa1 family	NA|255aa|up_8|NZ_CP013218.1_2583085_2583850_-	pfam04507, DUF576, Csa1 family	NA|258aa|up_7|NZ_CP013218.1_2583961_2584735_-	pfam04507, DUF576, Csa1 family	NA|310aa|up_6|NZ_CP013218.1_2584977_2585907_-	pfam09019, EcoRII-C, EcoRII C terminal	NA|398aa|up_5|NZ_CP013218.1_2586002_2587196_+	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|584aa|up_4|NZ_CP013218.1_2587271_2589023_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|89aa|up_3|NZ_CP013218.1_2589306_2589573_+	NA	NA|103aa|up_2|NZ_CP013218.1_2589716_2590025_+	NA	NA|289aa|up_1|NZ_CP013218.1_2590150_2591017_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|952aa|up_0|NZ_CP013218.1_2591196_2594052_-	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin	NA|453aa|down_0|NZ_CP013218.1_2598253_2599612_-	TIGR00791, Gluconate_permease, gluconate transporter	NA|518aa|down_1|NZ_CP013218.1_2599728_2601282_-	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type	NA|226aa|down_2|NZ_CP013218.1_2601306_2601984_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|255aa|down_3|NZ_CP013218.1_2602140_2602905_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|231aa|down_4|NZ_CP013218.1_2603069_2603762_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|139aa|down_5|NZ_CP013218.1_2603992_2604409_-	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown]	NA|608aa|down_6|NZ_CP013218.1_2604547_2606371_-	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|426aa|down_7|NZ_CP013218.1_2607282_2608560_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|204aa|down_8|NZ_CP013218.1_2609106_2609718_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|388aa|down_9|NZ_CP013218.1_2609815_2610979_-	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily
GCF_001887075.1_ASM188707v1	NZ_CP014695	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 isolate E154 plasmid paadD, complete sequence	1	2395-2522	1	CRISPRCasFinder	no			Orphan	GGGGACTTAGATTATCAATAGATAAATGAACATTTTTATT	40	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,TnsE_C	NA|168aa|up_1|NZ_CP014695.1_395_899_-,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|119aa|up_2|NZ_CP014695.1_17_374_-	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|168aa|up_1|NZ_CP014695.1_395_899_-	NA	NA|455aa|up_0|NZ_CP014695.1_987_2352_-	cd00569, HTH_Hin_like, Helix-turn-helix domain of Hin and related proteins	NA|329aa|down_0|NZ_CP014695.1_2589_3576_-	pfam01076, Mob_Pre, Plasmid recombination enzyme	NA|450aa|down_1|NZ_CP014695.1_3715_5065_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|72aa|down_2|NZ_CP014695.1_5102_5318_-	pfam01076, Mob_Pre, Plasmid recombination enzyme	NA|135aa|down_3|NZ_CP014695.1_5798_6203_-	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	NA|257aa|down_4|NZ_CP014695.1_6419_7190_-	pfam07827, KNTase_C, KNTase C-terminal domain	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
