assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001886875.1_ASM188687v1	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	1	493734-493825	1	CRISPRCasFinder	no		cas14j,RT,DEDDh,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,csa3	Orphan	TTTTACCCTTGCGAACGGTGATTTTTGTAA	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|109aa|up_9|NZ_CP013238.1_478941_479268_-,NA|231aa|up_5|NZ_CP013238.1_485520_486213_-,NA|371aa|up_0|NZ_CP013238.1_492341_493454_-,NA|488aa|down_0|NZ_CP013238.1_494477_495941_+,NA|163aa|down_1|NZ_CP013238.1_496025_496514_-	NA|109aa|up_9|NZ_CP013238.1_478941_479268_-	NA	NA|637aa|up_8|NZ_CP013238.1_480492_482403_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|405aa|up_7|NZ_CP013238.1_483375_484590_+	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism]	NA|170aa|up_6|NZ_CP013238.1_484940_485450_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|231aa|up_5|NZ_CP013238.1_485520_486213_-	NA	NA|384aa|up_4|NZ_CP013238.1_486216_487368_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|325aa|up_3|NZ_CP013238.1_488203_489178_+	pfam13614, AAA_31, AAA domain	NA|336aa|up_2|NZ_CP013238.1_489286_490294_+	cd16408, ParB_N_like, ParB N-terminal, parA -binding, -like domain of bacterial and plasmid parABS partitioning systems	NA|318aa|up_1|NZ_CP013238.1_490442_491396_-	pfam00589, Phage_integrase, Phage integrase family	NA|371aa|up_0|NZ_CP013238.1_492341_493454_-	NA	NA|488aa|down_0|NZ_CP013238.1_494477_495941_+	NA	NA|163aa|down_1|NZ_CP013238.1_496025_496514_-	NA	NA|308aa|down_2|NZ_CP013238.1_496965_497889_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|257aa|down_3|NZ_CP013238.1_501225_501996_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|281aa|down_4|NZ_CP013238.1_502005_502848_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|249aa|down_5|NZ_CP013238.1_503417_504164_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|105aa|down_6|NZ_CP013238.1_504165_504480_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|159aa|down_7|NZ_CP013238.1_505096_505573_+	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|182aa|down_8|NZ_CP013238.1_505627_506173_+	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|288aa|down_9|NZ_CP013238.1_506233_507097_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
GCF_001886875.1_ASM188687v1	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	2	493908-494018	2	CRISPRCasFinder	no		cas14j,RT,DEDDh,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,csa3	Orphan	TTTTACCCTTGCGAACGGTGATTTTTGTAA	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|109aa|up_9|NZ_CP013238.1_478941_479268_-,NA|231aa|up_5|NZ_CP013238.1_485520_486213_-,NA|371aa|up_0|NZ_CP013238.1_492341_493454_-,NA|488aa|down_0|NZ_CP013238.1_494477_495941_+,NA|163aa|down_1|NZ_CP013238.1_496025_496514_-	NA|109aa|up_9|NZ_CP013238.1_478941_479268_-	NA	NA|637aa|up_8|NZ_CP013238.1_480492_482403_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|405aa|up_7|NZ_CP013238.1_483375_484590_+	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism]	NA|170aa|up_6|NZ_CP013238.1_484940_485450_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|231aa|up_5|NZ_CP013238.1_485520_486213_-	NA	NA|384aa|up_4|NZ_CP013238.1_486216_487368_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|325aa|up_3|NZ_CP013238.1_488203_489178_+	pfam13614, AAA_31, AAA domain	NA|336aa|up_2|NZ_CP013238.1_489286_490294_+	cd16408, ParB_N_like, ParB N-terminal, parA -binding, -like domain of bacterial and plasmid parABS partitioning systems	NA|318aa|up_1|NZ_CP013238.1_490442_491396_-	pfam00589, Phage_integrase, Phage integrase family	NA|371aa|up_0|NZ_CP013238.1_492341_493454_-	NA	NA|488aa|down_0|NZ_CP013238.1_494477_495941_+	NA	NA|163aa|down_1|NZ_CP013238.1_496025_496514_-	NA	NA|308aa|down_2|NZ_CP013238.1_496965_497889_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|257aa|down_3|NZ_CP013238.1_501225_501996_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|281aa|down_4|NZ_CP013238.1_502005_502848_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|249aa|down_5|NZ_CP013238.1_503417_504164_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|105aa|down_6|NZ_CP013238.1_504165_504480_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|159aa|down_7|NZ_CP013238.1_505096_505573_+	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|182aa|down_8|NZ_CP013238.1_505627_506173_+	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|288aa|down_9|NZ_CP013238.1_506233_507097_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
GCF_001886875.1_ASM188687v1	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	3	676959-683324	1,3,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2	cas14j,RT,DEDDh,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,csa3	Type I-B	GATTAACAGTAACATTAGATGTATTTAAAT,GATTAACAGTAACATTAGATGTATTTAAAT,GATTAACAGTAACATTAGATGTATTTAAAT,GATTAACAGTAACATTAGATGTATTTAAAT	30,30,30,30	0	0	NA	NA	III-B:III-B:III-B:III-B	94,96,97,94	97	TypeI-B	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|130aa|up_9|NZ_CP013238.1_665702_666092_+,NA|128aa|down_0|NZ_CP013238.1_683663_684047_+,NA|211aa|down_1|NZ_CP013238.1_684052_684685_+,NA|107aa|down_2|NZ_CP013238.1_684677_684998_+,NA|80aa|down_7|NZ_CP013238.1_690012_690252_+	NA|130aa|up_9|NZ_CP013238.1_665702_666092_+	NA	NA|273aa|up_8|NZ_CP013238.1_666181_667000_+	pfam12787, EcsC, EcsC protein family	cas6|231aa|up_7|NZ_CP013238.1_668015_668708_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|587aa|up_6|NZ_CP013238.1_668722_670483_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|317aa|up_5|NZ_CP013238.1_670484_671435_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|263aa|up_4|NZ_CP013238.1_671438_672227_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|872aa|up_3|NZ_CP013238.1_672277_674893_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|165aa|up_2|NZ_CP013238.1_674954_675449_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|up_1|NZ_CP013238.1_675466_676465_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|97aa|up_0|NZ_CP013238.1_676481_676772_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|128aa|down_0|NZ_CP013238.1_683663_684047_+	NA	NA|211aa|down_1|NZ_CP013238.1_684052_684685_+	NA	NA|107aa|down_2|NZ_CP013238.1_684677_684998_+	NA	NA|814aa|down_3|NZ_CP013238.1_685013_687455_+	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|70aa|down_4|NZ_CP013238.1_687477_687687_+	pfam03994, DUF350, Domain of Unknown Function (DUF350)	NA|284aa|down_5|NZ_CP013238.1_687983_688835_+	pfam12541, DUF3737, Protein of unknown function (DUF3737)	NA|292aa|down_6|NZ_CP013238.1_688930_689806_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|80aa|down_7|NZ_CP013238.1_690012_690252_+	NA	NA|394aa|down_8|NZ_CP013238.1_690335_691517_+	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|398aa|down_9|NZ_CP013238.1_691759_692953_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily
GCF_001886875.1_ASM188687v1	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	4	755147-755527	2	CRT	no		cas14j,RT,DEDDh,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,csa3	Orphan	ATGAAAACAGGTTGGGTAAAA	21	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|74aa|up_1|NZ_CP013238.1_753141_753363_-,NA	NA|200aa|up_9|NZ_CP013238.1_742046_742646_+	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|442aa|up_8|NZ_CP013238.1_742848_744174_+	cd01314, D-HYD, D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin	NA|437aa|up_7|NZ_CP013238.1_744139_745450_+	PRK07203, PRK07203, putative aminohydrolase SsnA	NA|363aa|up_6|NZ_CP013238.1_745475_746564_+	COG0167, PyrD, Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]	NA|710aa|up_5|NZ_CP013238.1_746599_748729_+	pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase	NA|159aa|up_4|NZ_CP013238.1_748721_749198_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|288aa|up_3|NZ_CP013238.1_749191_750055_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|931aa|up_2|NZ_CP013238.1_750171_752964_+	TIGR03311, Se_dep_XDH, selenium-dependent xanthine dehydrogenase	NA|74aa|up_1|NZ_CP013238.1_753141_753363_-	NA	NA|342aa|up_0|NZ_CP013238.1_753804_754830_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|1067aa|down_0|NZ_CP013238.1_755626_758827_+	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16	NA|300aa|down_1|NZ_CP013238.1_759144_760044_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|480aa|down_2|NZ_CP013238.1_760096_761536_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|101aa|down_3|NZ_CP013238.1_761595_761898_+	COG1440, CelA, Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]	NA|447aa|down_4|NZ_CP013238.1_761928_763269_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|104aa|down_5|NZ_CP013238.1_763299_763611_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|350aa|down_6|NZ_CP013238.1_763762_764812_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|349aa|down_7|NZ_CP013238.1_764966_766013_-	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|228aa|down_8|NZ_CP013238.1_766012_766696_-	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|273aa|down_9|NZ_CP013238.1_766729_767548_-	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold
GCF_001886875.1_ASM188687v1	NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	1	811938-812023	1	CRISPRCasFinder	no		csa3,cas3,csx1,WYL,DinG,DEDDh	Orphan	AGGAGCTATGAAGACTGGTTGGATTC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|76aa|up_7|NZ_CP013239.1_796950_797178_-,NA	NA|577aa|up_9|NZ_CP013239.1_792705_794436_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|595aa|up_8|NZ_CP013239.1_794846_796631_+	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain	NA|76aa|up_7|NZ_CP013239.1_796950_797178_-	NA	NA|447aa|up_6|NZ_CP013239.1_798114_799455_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|400aa|up_5|NZ_CP013239.1_799850_801050_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|398aa|up_4|NZ_CP013239.1_801146_802340_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|610aa|up_3|NZ_CP013239.1_802769_804599_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|571aa|up_2|NZ_CP013239.1_805151_806864_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|627aa|up_1|NZ_CP013239.1_807436_809317_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|183aa|up_0|NZ_CP013239.1_809507_810056_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|586aa|down_0|NZ_CP013239.1_812569_814327_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|523aa|down_1|NZ_CP013239.1_814592_816161_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|616aa|down_2|NZ_CP013239.1_816317_818165_-	pfam04932, Wzy_C, O-Antigen ligase	NA|474aa|down_3|NZ_CP013239.1_818462_819884_-	TIGR03023, Sugar_transferase	NA|378aa|down_4|NZ_CP013239.1_820015_821149_-	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins	NA|294aa|down_5|NZ_CP013239.1_821353_822235_+	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|184aa|down_6|NZ_CP013239.1_822266_822818_+	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|340aa|down_7|NZ_CP013239.1_822844_823864_+	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|318aa|down_8|NZ_CP013239.1_823838_824792_+	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|390aa|down_9|NZ_CP013239.1_824823_825993_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins
GCF_001886875.1_ASM188687v1	NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	2	937493-937578	2	CRISPRCasFinder	no		csa3,cas3,csx1,WYL,DinG,DEDDh	Orphan	TTTAAATATTATCTTGGGAAAGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|109aa|up_6|NZ_CP013239.1_930562_930889_+,NA|132aa|down_1|NZ_CP013239.1_939885_940281_+,NA|112aa|down_2|NZ_CP013239.1_940282_940618_+,NA|191aa|down_5|NZ_CP013239.1_943518_944091_+,NA|130aa|down_7|NZ_CP013239.1_945051_945441_+	NA|471aa|up_9|NZ_CP013239.1_927049_928462_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|310aa|up_8|NZ_CP013239.1_928585_929515_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|226aa|up_7|NZ_CP013239.1_929472_930150_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|109aa|up_6|NZ_CP013239.1_930562_930889_+	NA	NA|526aa|up_5|NZ_CP013239.1_930949_932527_+	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|113aa|up_4|NZ_CP013239.1_932571_932910_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|241aa|up_3|NZ_CP013239.1_933147_933870_+	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain	NA|210aa|up_2|NZ_CP013239.1_934006_934636_-	COG0490, COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism]	NA|376aa|up_1|NZ_CP013239.1_934779_935907_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|528aa|up_0|NZ_CP013239.1_935906_937490_+	cd13609, PBP2_Opu_like_1, Substrate-binding domain of putative ABC-type osmoprotectant uptake system; the type 2 periplasmic-binding protein fold	NA|587aa|down_0|NZ_CP013239.1_937675_939436_-	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|132aa|down_1|NZ_CP013239.1_939885_940281_+	NA	NA|112aa|down_2|NZ_CP013239.1_940282_940618_+	NA	NA|476aa|down_3|NZ_CP013239.1_940698_942126_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|246aa|down_4|NZ_CP013239.1_942422_943160_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|191aa|down_5|NZ_CP013239.1_943518_944091_+	NA	NA|283aa|down_6|NZ_CP013239.1_944151_945000_+	sd00045, ANK, ankyrin repeats	NA|130aa|down_7|NZ_CP013239.1_945051_945441_+	NA	NA|433aa|down_8|NZ_CP013239.1_945720_947019_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|108aa|down_9|NZ_CP013239.1_947190_947514_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit
GCF_001886875.1_ASM188687v1	NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	3	2181206-2181289	3	CRISPRCasFinder	no		csa3,cas3,csx1,WYL,DinG,DEDDh	Orphan	TGGTATTATCTAAATGAAGATGGA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA,NA	NA|195aa|up_9|NZ_CP013239.1_2165860_2166445_-	COG2112, COG2112, Predicted Ser/Thr protein kinase [Signal transduction mechanisms]	NA|460aa|up_8|NZ_CP013239.1_2166716_2168096_+	PRK09496, trkA, Trk system potassium transporter TrkA	NA|483aa|up_7|NZ_CP013239.1_2168085_2169534_+	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|239aa|up_6|NZ_CP013239.1_2169709_2170426_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|299aa|up_5|NZ_CP013239.1_2170594_2171491_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|439aa|up_4|NZ_CP013239.1_2171580_2172897_+	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional	NA|88aa|up_3|NZ_CP013239.1_2173052_2173316_+	pfam10719, ComFB, Late competence development protein ComFB	NA|679aa|up_2|NZ_CP013239.1_2173476_2175513_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|1076aa|up_1|NZ_CP013239.1_2175832_2179060_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|457aa|up_0|NZ_CP013239.1_2179112_2180483_-	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3	NA|466aa|down_0|NZ_CP013239.1_2181793_2183191_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|201aa|down_1|NZ_CP013239.1_2183254_2183857_-	smart00257, LysM, Lysin motif	NA|166aa|down_2|NZ_CP013239.1_2184118_2184616_+	COG1329, COG1329, Transcriptional regulators, similar to M	NA|309aa|down_3|NZ_CP013239.1_2184753_2185680_+	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|307aa|down_4|NZ_CP013239.1_2185724_2186645_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|204aa|down_5|NZ_CP013239.1_2186805_2187417_-	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|556aa|down_6|NZ_CP013239.1_2187792_2189460_+	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|354aa|down_7|NZ_CP013239.1_2189562_2190624_+	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional	NA|511aa|down_8|NZ_CP013239.1_2190768_2192301_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|350aa|down_9|NZ_CP013239.1_2192491_2193541_+	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily
GCF_001886875.1_ASM188687v1	NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	4	2422667-2422764	4	CRISPRCasFinder	no	DinG	csa3,cas3,csx1,WYL,DinG,DEDDh	Type IV-A	ATTATTTCCCGCATCTTTTTTAT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|74aa|up_8|NZ_CP013239.1_2412870_2413092_+,NA|410aa|up_4|NZ_CP013239.1_2414554_2415784_-,NA|412aa|up_3|NZ_CP013239.1_2415812_2417048_-,NA|76aa|up_2|NZ_CP013239.1_2417762_2417990_-,NA|165aa|down_0|NZ_CP013239.1_2422938_2423433_-,NA|142aa|down_1|NZ_CP013239.1_2423866_2424292_+	NA|205aa|up_9|NZ_CP013239.1_2411104_2411719_-	pfam11667, DUF3267, Putative zincin peptidase	NA|74aa|up_8|NZ_CP013239.1_2412870_2413092_+	NA	NA|96aa|up_7|NZ_CP013239.1_2413388_2413676_-	pfam06304, DUF1048, Protein of unknown function (DUF1048)	NA|116aa|up_6|NZ_CP013239.1_2413685_2414033_-	pfam06304, DUF1048, Protein of unknown function (DUF1048)	NA|111aa|up_5|NZ_CP013239.1_2414036_2414369_-	pfam03551, PadR, Transcriptional regulator PadR-like family	NA|410aa|up_4|NZ_CP013239.1_2414554_2415784_-	NA	NA|412aa|up_3|NZ_CP013239.1_2415812_2417048_-	NA	NA|76aa|up_2|NZ_CP013239.1_2417762_2417990_-	NA	NA|330aa|up_1|NZ_CP013239.1_2418185_2419175_-	cd00542, Ntn_PVA, Penicillin V acylase (PVA), also known as conjugated bile salt acid hydrolase (CBAH), catalyzes the hydrolysis of penicillin V to yield 6-amino penicillanic acid (6-APA), an important key intermediate of semisynthetic penicillins	DinG|976aa|up_0|NZ_CP013239.1_2419349_2422277_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|165aa|down_0|NZ_CP013239.1_2422938_2423433_-	NA	NA|142aa|down_1|NZ_CP013239.1_2423866_2424292_+	NA	NA|492aa|down_2|NZ_CP013239.1_2424393_2425869_-	PRK00029, PRK00029, YdiU family protein	NA|311aa|down_3|NZ_CP013239.1_2425936_2426869_-	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ	NA|224aa|down_4|NZ_CP013239.1_2426946_2427618_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|676aa|down_5|NZ_CP013239.1_2427666_2429694_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|down_6|NZ_CP013239.1_2429683_2430451_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|311aa|down_7|NZ_CP013239.1_2432433_2433366_-	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein	NA|800aa|down_8|NZ_CP013239.1_2433443_2435843_-	cd01677, PFL2_DhaB_BssA, Pyruvate formate lyase 2 and related enzymes	NA|329aa|down_9|NZ_CP013239.1_2436213_2437200_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3
GCF_001886875.1_ASM188687v1	NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	5	2682766-2682963	1,5	PILER-CR,CRISPRCasFinder	no		csa3,cas3,csx1,WYL,DinG,DEDDh	Orphan	ACTCACATTCATTCATTGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTCTCACTT,TAAGTTCGACTACCAAATATAAAATTTGGAGT	60,32	0	0	NA	NA	NA:NA	2,1	2	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA,NA|161aa|down_0|NZ_CP013239.1_2685568_2686051_-,NA|344aa|down_3|NZ_CP013239.1_2688739_2689771_-,NA|227aa|down_4|NZ_CP013239.1_2690092_2690773_-,NA|78aa|down_7|NZ_CP013239.1_2692883_2693117_+,NA|155aa|down_8|NZ_CP013239.1_2693274_2693739_-	NA|344aa|up_9|NZ_CP013239.1_2671797_2672829_-	PRK15055, PRK15055, anaerobic sulfite reductase subunit AsrA	NA|447aa|up_8|NZ_CP013239.1_2672948_2674289_-	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|196aa|up_7|NZ_CP013239.1_2674437_2675025_-	cd04692, Nudix_Hydrolase_33, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|338aa|up_6|NZ_CP013239.1_2675100_2676114_-	pfam13515, FUSC_2, Fusaric acid resistance protein-like	NA|578aa|up_5|NZ_CP013239.1_2676809_2678543_+	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type	NA|98aa|up_4|NZ_CP013239.1_2678535_2678829_+	PRK08178, PRK08178, acetolactate synthase 1 small subunit	NA|122aa|up_3|NZ_CP013239.1_2678971_2679337_+	PRK11770, PRK11770, YccF domain-containing protein	NA|480aa|up_2|NZ_CP013239.1_2679393_2680833_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|480aa|up_1|NZ_CP013239.1_2680845_2682285_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|93aa|up_0|NZ_CP013239.1_2682300_2682579_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|161aa|down_0|NZ_CP013239.1_2685568_2686051_-	NA	NA|362aa|down_1|NZ_CP013239.1_2686264_2687350_-	PRK08664, PRK08664, aspartate-semialdehyde dehydrogenase; Reviewed	NA|298aa|down_2|NZ_CP013239.1_2687736_2688630_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|344aa|down_3|NZ_CP013239.1_2688739_2689771_-	NA	NA|227aa|down_4|NZ_CP013239.1_2690092_2690773_-	NA	NA|246aa|down_5|NZ_CP013239.1_2691057_2691795_-	sd00006, TPR, Tetratricopeptide repeat	NA|149aa|down_6|NZ_CP013239.1_2692028_2692475_-	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|78aa|down_7|NZ_CP013239.1_2692883_2693117_+	NA	NA|155aa|down_8|NZ_CP013239.1_2693274_2693739_-	NA	NA|1229aa|down_9|NZ_CP013239.1_2693931_2697618_-	pfam07745, Glyco_hydro_53, Glycosyl hydrolase family 53
GCF_001886875.1_ASM188687v1	NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	6	3635104-3635212	6	CRISPRCasFinder	no		csa3,cas3,csx1,WYL,DinG,DEDDh	Orphan	TTTTAGAAATCATTTATATGAAGTT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csx1,WYL,DinG,DEDDh,cas14j,RT,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	NA|214aa|up_5|NZ_CP013239.1_3629877_3630519_-,NA|70aa|up_4|NZ_CP013239.1_3630688_3630898_+,NA|300aa|up_0|NZ_CP013239.1_3634086_3634986_-,NA|78aa|down_0|NZ_CP013239.1_3635246_3635480_+,NA|234aa|down_4|NZ_CP013239.1_3638939_3639641_-	NA|376aa|up_9|NZ_CP013239.1_3624022_3625150_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|388aa|up_8|NZ_CP013239.1_3626417_3627581_-	pfam11185, DUF2971, Protein of unknown function (DUF2971)	NA|372aa|up_7|NZ_CP013239.1_3627684_3628800_-	pfam03235, DUF262, Protein of unknown function DUF262	NA|269aa|up_6|NZ_CP013239.1_3628814_3629621_-	pfam08867, FRG, FRG domain	NA|214aa|up_5|NZ_CP013239.1_3629877_3630519_-	NA	NA|70aa|up_4|NZ_CP013239.1_3630688_3630898_+	NA	NA|212aa|up_3|NZ_CP013239.1_3631116_3631752_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|310aa|up_2|NZ_CP013239.1_3632330_3633260_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|226aa|up_1|NZ_CP013239.1_3633217_3633895_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|300aa|up_0|NZ_CP013239.1_3634086_3634986_-	NA	NA|78aa|down_0|NZ_CP013239.1_3635246_3635480_+	NA	NA|498aa|down_1|NZ_CP013239.1_3635473_3636967_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|452aa|down_2|NZ_CP013239.1_3637016_3638372_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|136aa|down_3|NZ_CP013239.1_3638511_3638919_-	pfam06271, RDD, RDD family	NA|234aa|down_4|NZ_CP013239.1_3638939_3639641_-	NA	NA|225aa|down_5|NZ_CP013239.1_3640114_3640789_-	TIGR01259, ComE_operon_protein_1, comEA protein	NA|414aa|down_6|NZ_CP013239.1_3640956_3642198_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|302aa|down_7|NZ_CP013239.1_3642304_3643210_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|425aa|down_8|NZ_CP013239.1_3643236_3644511_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|188aa|down_9|NZ_CP013239.1_3644793_3645357_-	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]
