The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018099	Caldithrix abyssi DSM 13497 strain LF13 chromosome, complete genome	4978541	671975	754430	4978541	tail,tRNA,transposase	Bacillus_phage(28.57%)	58	NA	NA
WP_006928579.1|671975_674666_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	43.2	4.8e-164
WP_006926562.1|674947_676534_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_006927061.1|676836_678498_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_044281142.1|679085_681059_+	homoaconitase	NA	NA	NA	NA	NA
WP_006928581.1|681183_682275_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_006928582.1|682365_683289_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_006928583.1|683423_685019_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_006928584.1|685230_686040_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_006928585.1|686168_686450_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_006928586.1|686749_688723_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_006928587.1|688730_689258_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_006928588.1|689310_690219_-	proline dehydrogenase family protein	NA	NA	NA	NA	NA
WP_006928590.1|690780_692949_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_006928591.1|693360_695046_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_006928592.1|695042_695834_+	DUF4292 domain-containing protein	NA	NA	NA	NA	NA
WP_006928593.1|695847_696771_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	28.1	4.8e-23
WP_006928594.1|696782_697817_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_006928595.1|697930_700327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006928596.1|700646_701576_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_006928597.1|701585_702218_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_006928598.1|702230_703031_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_083581042.1|703301_704963_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_044281147.1|705980_706718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006928601.1|706695_708075_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_006928602.1|708327_711552_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	29.2	7.2e-66
WP_006928603.1|712407_713487_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_006928604.1|713560_714973_+	PhoH family protein	NA	A0A141HS37	Bacillus_phage	29.7	2.1e-41
WP_006928605.1|715103_718637_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_006928606.1|718925_719270_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	40.9	1.9e-09
WP_006928607.1|719660_721829_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_006928608.1|722352_723738_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_006928609.1|723734_725204_-	HAMP domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	24.0	3.9e-11
WP_006928610.1|725203_726142_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_006928611.1|726443_727031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006928612.1|727094_727493_+	DUF498 domain-containing protein	NA	NA	NA	NA	NA
WP_006928613.1|727614_728097_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_006928614.1|728110_729610_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_006928615.1|729629_731126_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_006928616.1|731135_731780_+	DUF47 family protein	NA	NA	NA	NA	NA
WP_006928618.1|731792_733274_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_006928619.1|733290_734574_+	phosphate-selective porin O and P	NA	NA	NA	NA	NA
WP_006928620.1|734586_735897_+|tail	lamin tail domain-containing protein	tail	NA	NA	NA	NA
WP_169833690.1|735920_736664_+	SdiA-regulated domain-containing protein	NA	NA	NA	NA	NA
WP_006928623.1|736857_738663_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.5	3.8e-24
WP_006928627.1|738681_739398_+	signal peptidase I	NA	NA	NA	NA	NA
WP_006928628.1|739394_740555_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
WP_006928630.1|740529_742365_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_006928631.1|742364_743627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006928632.1|743703_744102_+	YjbQ family protein	NA	NA	NA	NA	NA
WP_006928633.1|744343_745951_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006928634.1|745985_746852_+	DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_006928635.1|746841_747663_+	histidinol-phosphatase HisJ	NA	NA	NA	NA	NA
WP_006928636.1|747674_748094_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_006928637.1|748104_748971_+	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_006928638.1|748983_749754_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_006928639.1|749771_751004_+	DUF1343 domain-containing protein	NA	NA	NA	NA	NA
WP_006927246.1|751068_752655_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_006927246.1|752843_754430_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP018099	Caldithrix abyssi DSM 13497 strain LF13 chromosome, complete genome	4978541	2681566	2756453	4978541	protease,transposase	Bacillus_phage(25.0%)	59	NA	NA
WP_006930366.1|2681566_2682592_-|protease	trypsin-like serine protease	protease	J7Q326	Aeropyrum_coil-shaped_virus	32.5	3.5e-22
WP_052304183.1|2682915_2683563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150109312.1|2683798_2684260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006930373.1|2684340_2687091_-	insulinase family protein	NA	NA	NA	NA	NA
WP_150109378.1|2687160_2687856_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_006930375.1|2687861_2688860_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_006930376.1|2688884_2689514_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_006930377.1|2689545_2690268_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_006930378.1|2690410_2691079_+	response regulator	NA	W8CYM9	Bacillus_phage	35.0	4.1e-16
WP_006930379.1|2691080_2691281_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_006930380.1|2691298_2692300_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_006930381.1|2692302_2693979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006930382.1|2694013_2695243_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_006930383.1|2695267_2696725_-	peptidase M64	NA	NA	NA	NA	NA
WP_006930384.1|2696940_2697120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006930386.1|2697132_2698494_-	alkaline phosphatase	NA	NA	NA	NA	NA
WP_006930388.1|2698639_2699701_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_006930390.1|2699681_2700395_-	DUF2459 domain-containing protein	NA	NA	NA	NA	NA
WP_006930392.1|2700897_2703420_-	CotH kinase family protein	NA	A0A2D1GD28	Mycobacterium_phage	30.7	2.6e-55
WP_006930393.1|2703558_2705466_-	Na+:solute symporter	NA	NA	NA	NA	NA
WP_006930395.1|2705791_2707624_-	glutamate formimidoyltransferase	NA	NA	NA	NA	NA
WP_044281339.1|2707828_2708392_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_006928599.1|2708707_2710369_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_006930400.1|2710426_2712448_-	DUF1573 domain-containing protein	NA	NA	NA	NA	NA
WP_006930402.1|2713058_2713814_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_006930403.1|2714074_2717683_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
WP_006930405.1|2718375_2719452_-	class II fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_006930406.1|2719959_2720985_-	arsenic efflux protein	NA	NA	NA	NA	NA
WP_006930407.1|2721011_2721662_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_006930408.1|2721663_2722056_-	dinitrogenase iron-molybdenum cofactor biosynthesis protein	NA	NA	NA	NA	NA
WP_006930409.1|2722257_2722668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006930411.1|2722788_2723430_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_071961279.1|2723760_2725521_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	29.9	4.3e-65
WP_006930413.1|2725580_2727206_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA	NA
WP_006930414.1|2727384_2729280_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.3	1.8e-56
WP_006930415.1|2729290_2730148_+	DUF3108 domain-containing protein	NA	NA	NA	NA	NA
WP_006930417.1|2730316_2730940_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	53.4	4.6e-62
WP_006930418.1|2730972_2731530_-	PepSY-associated TM helix domain-containing protein	NA	NA	NA	NA	NA
WP_006930419.1|2731621_2732095_-	DUF4920 domain-containing protein	NA	NA	NA	NA	NA
WP_006930420.1|2732166_2732700_-	spore maturation protein	NA	NA	NA	NA	NA
WP_150109379.1|2732692_2733346_-	nucleoside recognition protein	NA	NA	NA	NA	NA
WP_006930422.1|2734548_2735523_+	AgmX/PglI C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_006930425.1|2735515_2736172_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_006930440.1|2736174_2740203_-	S8 family serine peptidase	NA	A0A2K9L199	Tupanvirus	34.7	1.3e-19
WP_081475109.1|2740202_2741726_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_169833709.1|2741719_2742226_-	LptE family protein	NA	NA	NA	NA	NA
WP_006930447.1|2742380_2743541_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_006930448.1|2743850_2744687_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_044281343.1|2744896_2745325_-|protease	hydrogenase maturation protease	protease	NA	NA	NA	NA
WP_006930450.1|2745356_2746040_-	Ni/Fe-hydrogenase, b-type cytochrome subunit	NA	NA	NA	NA	NA
WP_150109313.1|2746052_2747771_-	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA	NA
WP_006930452.1|2747770_2748883_-	hydrogenase small subunit	NA	NA	NA	NA	NA
WP_006930453.1|2749337_2749655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006930454.1|2749670_2751053_-	tetrathionate reductase family octaheme c-type cytochrome	NA	NA	NA	NA	NA
WP_006930455.1|2751481_2751811_-	Hpt domain-containing protein	NA	NA	NA	NA	NA
WP_006930456.1|2751944_2752373_-	OsmC family protein	NA	NA	NA	NA	NA
WP_006930457.1|2752393_2752549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006926562.1|2752806_2754393_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_071961280.1|2754692_2756453_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	30.1	5.1e-66
>prophage 3
NZ_CP018099	Caldithrix abyssi DSM 13497 strain LF13 chromosome, complete genome	4978541	3304484	3314083	4978541		Salmonella_phage(16.67%)	7	NA	NA
WP_169833716.1|3304484_3306656_-	RelA/SpoT family protein	NA	J9Q7H7	Salmonella_phage	33.6	2.1e-08
WP_044281452.1|3306689_3308069_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	43.3	3.2e-95
WP_006926512.1|3308661_3309462_-	uracil-DNA glycosylase	NA	L7TNG6	Rhizobium_phage	25.5	1.3e-05
WP_006926513.1|3309458_3310520_-	DNA/pantothenate metabolism flavoprotein domain protein	NA	Q9HH70	Methanothermobacter_phage	35.6	8.2e-27
WP_006926514.1|3310521_3311082_-	guanylate kinase	NA	A0A1C9KCK9	Volepox_virus	33.0	1.9e-19
WP_006926515.1|3311091_3311967_-	YicC family protein	NA	NA	NA	NA	NA
WP_006926516.1|3312415_3314083_+	DUF814 domain-containing protein	NA	M1I3C6	Paramecium_bursaria_Chlorella_virus	42.0	4.6e-08
>prophage 6
NZ_CP018099	Caldithrix abyssi DSM 13497 strain LF13 chromosome, complete genome	4978541	4826923	4862518	4978541	transposase	Staphylococcus_virus(50.0%)	33	NA	NA
WP_071961310.1|4826923_4828684_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	29.4	1.4e-63
WP_169313624.1|4830471_4831119_+	succinate dehydrogenase cytochrome b subunit	NA	NA	NA	NA	NA
WP_006927722.1|4831115_4833026_+	fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_006927721.1|4833037_4833793_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_006927720.1|4833875_4835321_-	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_006927719.1|4835349_4836369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044281037.1|4836658_4836934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006927718.1|4837059_4837515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006927717.1|4837537_4838500_-	C40 family peptidase	NA	A0A0A8WIF2	Clostridium_phage	31.4	7.2e-06
WP_006927716.1|4838627_4838969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006927715.1|4838987_4840019_-	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA	NA
WP_006927714.1|4840127_4840493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044281015.1|4840650_4840923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006926562.1|4841379_4842966_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_081475146.1|4843538_4844393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006927712.1|4844414_4844627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006927711.1|4844929_4845157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169313623.1|4845340_4846204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006927708.1|4846205_4847009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169833740.1|4847114_4847288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006927707.1|4847289_4847820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081475145.1|4848675_4849542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169833741.1|4849716_4849974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006927061.1|4850252_4851914_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_006926562.1|4852285_4853872_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_006927704.1|4854126_4854450_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_006927703.1|4854619_4855144_-	cytochrome P460 family protein	NA	NA	NA	NA	NA
WP_006927702.1|4855170_4856010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006927701.1|4856012_4856585_-	YceI family protein	NA	NA	NA	NA	NA
WP_052304144.1|4856688_4857099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006927699.1|4857208_4859494_+	fused MFS/spermidine synthase	NA	NA	NA	NA	NA
WP_006926703.1|4859590_4861387_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_006927698.1|4862074_4862518_+|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
