assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001879605.1_ASM187960v1	NZ_CP013246	Clostridium botulinum strain CDC_69094, complete genome	1	402588-403077	1,1	CRISPRCasFinder,CRT	no		WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	Orphan	ATTTAAATACATCTCATGTTATTGTTCAAC,ATTTAAATACATCTTATGTTAATGTTCAAC	30,30	0	0	NA	NA	III-B:III-B	7,7	7	Orphan	WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	NA|39aa|up_9|NZ_CP013246.1_392668_392785_-,NA|81aa|up_1|NZ_CP013246.1_401713_401956_-,NA|63aa|up_0|NZ_CP013246.1_401957_402146_-,NA|353aa|down_0|NZ_CP013246.1_403387_404446_-,NA|58aa|down_2|NZ_CP013246.1_405505_405679_-,NA|84aa|down_5|NZ_CP013246.1_408333_408585_-,NA|56aa|down_6|NZ_CP013246.1_408727_408895_-	NA|39aa|up_9|NZ_CP013246.1_392668_392785_-	NA	NA|295aa|up_8|NZ_CP013246.1_392861_393746_+	PRK06701, PRK06701, short chain dehydrogenase; Provisional	NA|278aa|up_7|NZ_CP013246.1_393962_394796_-	pfam06161, DUF975, Protein of unknown function (DUF975)	NA|447aa|up_6|NZ_CP013246.1_395035_396376_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|491aa|up_5|NZ_CP013246.1_396463_397936_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|390aa|up_4|NZ_CP013246.1_398361_399531_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|185aa|up_3|NZ_CP013246.1_399968_400523_-	COG3945, COG3945, Uncharacterized conserved protein [Function unknown]	NA|56aa|up_2|NZ_CP013246.1_401408_401576_-	PRK04024, PRK04024, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|81aa|up_1|NZ_CP013246.1_401713_401956_-	NA	NA|63aa|up_0|NZ_CP013246.1_401957_402146_-	NA	NA|353aa|down_0|NZ_CP013246.1_403387_404446_-	NA	NA|257aa|down_1|NZ_CP013246.1_404694_405465_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|58aa|down_2|NZ_CP013246.1_405505_405679_-	NA	NA|75aa|down_3|NZ_CP013246.1_405690_405915_-	pfam10779, XhlA, Haemolysin XhlA	NA|399aa|down_4|NZ_CP013246.1_406082_407279_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|84aa|down_5|NZ_CP013246.1_408333_408585_-	NA	NA|56aa|down_6|NZ_CP013246.1_408727_408895_-	NA	NA|274aa|down_7|NZ_CP013246.1_409814_410636_-	TIGR02875, stage_0_sporulation_protein_A, sporulation transcription factor Spo0A	NA|409aa|down_8|NZ_CP013246.1_411065_412292_-	TIGR02860, stage_IV_sporulation_protein_B, stage IV sporulation protein B	NA|299aa|down_9|NZ_CP013246.1_412713_413610_-	pfam04204, HTS, Homoserine O-succinyltransferase
GCF_001879605.1_ASM187960v1	NZ_CP013246	Clostridium botulinum strain CDC_69094, complete genome	2	698380-698607	2,1	CRT,PILER-CR	no	cas3,cas5,cas7,cas8b1,cas6	WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	Type I-B	TATTTAAATACATCTTATGTTA,ATTTAAATACATCTTATGTTACTGTTCAAC	22,30	0	0	NA	NA	NA:III-B	3,3	3	TypeI-B	WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	NA|136aa|up_1|NZ_CP013246.1_696398_696806_-,cas8b1|577aa|down_3|NZ_CP013246.1_704139_705870_-,NA|279aa|down_5|NZ_CP013246.1_707347_708184_-,NA|165aa|down_6|NZ_CP013246.1_708953_709448_-	NA|667aa|up_9|NZ_CP013246.1_686789_688790_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_8|NZ_CP013246.1_688770_689538_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_7|NZ_CP013246.1_690313_690667_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|698aa|up_6|NZ_CP013246.1_690992_693086_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|455aa|up_5|NZ_CP013246.1_693297_694662_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|95aa|up_4|NZ_CP013246.1_694674_694959_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_3|NZ_CP013246.1_694987_695425_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_2|NZ_CP013246.1_695448_696165_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|136aa|up_1|NZ_CP013246.1_696398_696806_-	NA	NA|249aa|up_0|NZ_CP013246.1_697195_697942_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	cas3|745aa|down_0|NZ_CP013246.1_700234_702469_-	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas5|238aa|down_1|NZ_CP013246.1_702486_703200_-	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas7|312aa|down_2|NZ_CP013246.1_703201_704137_-	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas8b1|577aa|down_3|NZ_CP013246.1_704139_705870_-	NA	cas6|249aa|down_4|NZ_CP013246.1_705873_706620_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|279aa|down_5|NZ_CP013246.1_707347_708184_-	NA	NA|165aa|down_6|NZ_CP013246.1_708953_709448_-	NA	NA|205aa|down_7|NZ_CP013246.1_709492_710107_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|68aa|down_8|NZ_CP013246.1_710430_710634_+	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain	NA|469aa|down_9|NZ_CP013246.1_711063_712470_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters
GCF_001879605.1_ASM187960v1	NZ_CP013246	Clostridium botulinum strain CDC_69094, complete genome	3	734916-735207	2,2,3	PILER-CR,CRISPRCasFinder,CRT	no		WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	Orphan	ATTTAAATACATCTCATGTTATTGTTCAAC,ATTTAAATACATCTCATGTTATTGTTCAAC,ATTTAAATACATCTCATGTTATTGTTCAAC	30,30,30	0	0	NA	NA	III-B:III-B:III-B	4,4,4	4	Orphan	WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	NA|98aa|up_8|NZ_CP013246.1_724405_724699_-,NA|300aa|down_3|NZ_CP013246.1_738153_739053_+	NA|266aa|up_9|NZ_CP013246.1_723560_724358_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|up_8|NZ_CP013246.1_724405_724699_-	NA	NA|150aa|up_7|NZ_CP013246.1_724873_725323_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|139aa|up_6|NZ_CP013246.1_725461_725878_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|311aa|up_5|NZ_CP013246.1_726387_727320_-	cd05663, M28_like_PA_PDZ_associated, M28 Zn-peptidase containing a protease-associated (PA) domain insert and associated with a PDZ domain	NA|283aa|up_4|NZ_CP013246.1_728284_729133_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|307aa|up_3|NZ_CP013246.1_729409_730330_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|up_2|NZ_CP013246.1_730654_732148_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|488aa|up_1|NZ_CP013246.1_732927_734391_+	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|128aa|up_0|NZ_CP013246.1_734425_734809_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|151aa|down_0|NZ_CP013246.1_735541_735994_+	pfam12638, Staygreen, Staygreen protein	NA|149aa|down_1|NZ_CP013246.1_736075_736522_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|349aa|down_2|NZ_CP013246.1_736689_737736_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|300aa|down_3|NZ_CP013246.1_738153_739053_+	NA	NA|441aa|down_4|NZ_CP013246.1_739393_740716_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|245aa|down_5|NZ_CP013246.1_740783_741518_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|258aa|down_6|NZ_CP013246.1_742020_742794_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|429aa|down_7|NZ_CP013246.1_742931_744218_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]	NA|350aa|down_8|NZ_CP013246.1_744511_745561_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|262aa|down_9|NZ_CP013246.1_745579_746365_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]
GCF_001879605.1_ASM187960v1	NZ_CP013246	Clostridium botulinum strain CDC_69094, complete genome	4	3472574-3472868	3,3,4	PILER-CR,CRISPRCasFinder,CRT	no		WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	Orphan	ATTTAAATACATCTCATGTTAATGTTCAAT,ATTGAACATTAACATGAGATGTATTTAAAT,ATTGAACATTAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	4,4,4	4	Orphan	WYL,RT,cas3,DEDDh,cas5,cas7,cas8b1,cas6,csa3,DinG	NA|41aa|up_0|NZ_CP013246.1_3472361_3472484_-,NA	NA|536aa|up_9|NZ_CP013246.1_3459617_3461225_+	pfam14897, EpsG, EpsG family	NA|787aa|up_8|NZ_CP013246.1_3461588_3463949_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|224aa|up_7|NZ_CP013246.1_3464108_3464780_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|344aa|up_6|NZ_CP013246.1_3464776_3465808_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|342aa|up_5|NZ_CP013246.1_3466217_3467243_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|182aa|up_4|NZ_CP013246.1_3467482_3468028_+	COG1268, BioY, Uncharacterized conserved protein [General function prediction only]	NA|216aa|up_3|NZ_CP013246.1_3468256_3468904_+	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|532aa|up_2|NZ_CP013246.1_3469908_3471504_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|186aa|up_1|NZ_CP013246.1_3471795_3472353_+	PRK05800, cobU, adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated	NA|41aa|up_0|NZ_CP013246.1_3472361_3472484_-	NA	NA|255aa|down_0|NZ_CP013246.1_3472980_3473745_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|494aa|down_1|NZ_CP013246.1_3474449_3475931_+	PRK00784, PRK00784, cobyric acid synthase	NA|324aa|down_2|NZ_CP013246.1_3475932_3476904_+	PRK01209, cobD, cobalamin biosynthesis protein	NA|363aa|down_3|NZ_CP013246.1_3477288_3478377_+	PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional	NA|240aa|down_4|NZ_CP013246.1_3478561_3479281_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|100aa|down_5|NZ_CP013246.1_3479284_3479584_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|233aa|down_6|NZ_CP013246.1_3479546_3480245_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|221aa|down_7|NZ_CP013246.1_3480578_3481241_+	PRK05562, PRK05562, NAD(P)-dependent oxidoreductase	NA|291aa|down_8|NZ_CP013246.1_3481209_3482082_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|487aa|down_9|NZ_CP013246.1_3482217_3483678_+	TIGR01469, Uroporphyrinogen-III_C-methyltransferase, uroporphyrin-III C-methyltransferase
