assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001879585.1_ASM187958v1	NZ_CP013249	Vibrio parahaemolyticus strain FORC_022 chromosome 2, complete sequence	1	68676-68773	1	CRISPRCasFinder	no	DEDDh	DEDDh,WYL,csa3,cas3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Unclear	TATTTTTAAAATGCCTTTTCAAAAA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DinG,csa3,csx1,DEDDh,WYL,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|135aa|up_9|NZ_CP013249.1_58658_59063_-,NA|743aa|down_9|NZ_CP013249.1_76580_78809_+	NA|135aa|up_9|NZ_CP013249.1_58658_59063_-	NA	NA|364aa|up_8|NZ_CP013249.1_59072_60164_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|161aa|up_7|NZ_CP013249.1_60163_60646_-	COG3915, COG3915, Uncharacterized protein conserved in bacteria [Function unknown]	NA|280aa|up_6|NZ_CP013249.1_61069_61909_-	PLN02442, PLN02442, S-formylglutathione hydrolase	NA|383aa|up_5|NZ_CP013249.1_61970_63119_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|269aa|up_4|NZ_CP013249.1_63412_64219_+	pfam00797, Acetyltransf_2, N-acetyltransferase	NA|290aa|up_3|NZ_CP013249.1_64299_65169_+	cd08470, PBP2_CrgA_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding domain	DEDDh|237aa|up_2|NZ_CP013249.1_65169_65880_-	PRK09146, PRK09146, DNA polymerase III subunit epsilon; Validated	NA|623aa|up_1|NZ_CP013249.1_65882_67751_-	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	NA|266aa|up_0|NZ_CP013249.1_67834_68632_-	PRK15090, PRK15090, DNA-binding transcriptional regulator KdgR; Provisional	NA|254aa|down_0|NZ_CP013249.1_68872_69634_+	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|175aa|down_1|NZ_CP013249.1_69652_70177_+	pfam10688, Imp-YgjV, Bacterial inner membrane protein	NA|107aa|down_2|NZ_CP013249.1_70184_70505_+	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain	NA|212aa|down_3|NZ_CP013249.1_70545_71181_+	PRK09273, PRK09273, hypothetical protein; Provisional	NA|304aa|down_4|NZ_CP013249.1_71258_72170_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|310aa|down_5|NZ_CP013249.1_72268_73198_+	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|208aa|down_6|NZ_CP013249.1_73209_73833_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|580aa|down_7|NZ_CP013249.1_74018_75758_-	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|226aa|down_8|NZ_CP013249.1_75887_76565_+	pfam06178, KdgM, Oligogalacturonate-specific porin protein (KdgM)	NA|743aa|down_9|NZ_CP013249.1_76580_78809_+	NA
GCF_001879585.1_ASM187958v1	NZ_CP013249	Vibrio parahaemolyticus strain FORC_022 chromosome 2, complete sequence	2	597373-597506	2	CRISPRCasFinder	no		DEDDh,WYL,csa3,cas3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	GGCGGTCGTCGTGAAGGTGGTTTCCGTGGTAACCG	35	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DinG,csa3,csx1,DEDDh,WYL,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|33aa|up_9|NZ_CP013249.1_584058_584157_-,NA|42aa|down_1|NZ_CP013249.1_599451_599577_-	NA|33aa|up_9|NZ_CP013249.1_584058_584157_-	NA	NA|309aa|up_8|NZ_CP013249.1_584161_585088_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|790aa|up_7|NZ_CP013249.1_585118_587488_-	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins	NA|421aa|up_6|NZ_CP013249.1_587495_588758_-	TIGR03942, sulfatase_rSAM, anaerobic sulfatase-maturating enzyme	NA|318aa|up_5|NZ_CP013249.1_588869_589823_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|227aa|up_4|NZ_CP013249.1_590267_590948_+	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|276aa|up_3|NZ_CP013249.1_591001_591829_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|133aa|up_2|NZ_CP013249.1_592040_592439_+	pfam11225, DUF3024, Protein of unknown function (DUF3024)	NA|268aa|up_1|NZ_CP013249.1_592443_593247_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|669aa|up_0|NZ_CP013249.1_593318_595325_-	PRK05054, PRK05054, exoribonuclease II; Provisional	NA|534aa|down_0|NZ_CP013249.1_597710_599312_-	cd01948, EAL, EAL domain	NA|42aa|down_1|NZ_CP013249.1_599451_599577_-	NA	NA|398aa|down_2|NZ_CP013249.1_599609_600803_+	PRK12440, PRK12440, acetate/propionate family kinase	NA|438aa|down_3|NZ_CP013249.1_601082_602396_+	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|293aa|down_4|NZ_CP013249.1_602681_603560_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|184aa|down_5|NZ_CP013249.1_603585_604137_+	COG5413, COG5413, Uncharacterized integral membrane protein [Function unknown]	NA|301aa|down_6|NZ_CP013249.1_604172_605075_-	PRK05692, PRK05692, hydroxymethylglutaryl-CoA lyase; Provisional	NA|282aa|down_7|NZ_CP013249.1_605071_605917_-	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional	NA|535aa|down_8|NZ_CP013249.1_605954_607559_-	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain	NA|390aa|down_9|NZ_CP013249.1_607593_608763_-	cd01156, IVD, Isovaleryl-CoA dehydrogenase
GCF_001879585.1_ASM187958v1	NZ_CP013249	Vibrio parahaemolyticus strain FORC_022 chromosome 2, complete sequence	3	826587-828294	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	DEDDh,WYL,csa3,cas3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTAACTGCCACACAGGCAGCTTAGAAA,GTTAACTGCCACACAGGCAGCTTAGAAA,GTTAACTGCCACACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	28,28,28	28	TypeI-F	cas3,RT,DinG,csa3,csx1,DEDDh,WYL,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|122aa|up_6|NZ_CP013249.1_816858_817224_+,NA|114aa|down_0|NZ_CP013249.1_828656_828998_+	NA|271aa|up_9|NZ_CP013249.1_813942_814755_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|493aa|up_8|NZ_CP013249.1_814984_816463_+	cd16033, sulfatase_like, uncharacterized sulfatase subfamily	NA|119aa|up_7|NZ_CP013249.1_816518_816875_+	COG2149, COG2149, Predicted membrane protein [Function unknown]	NA|122aa|up_6|NZ_CP013249.1_816858_817224_+	NA	cas1|326aa|up_5|NZ_CP013249.1_818229_819207_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1127aa|up_4|NZ_CP013249.1_819203_822584_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|424aa|up_3|NZ_CP013249.1_822583_823855_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|298aa|up_2|NZ_CP013249.1_823851_824745_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|344aa|up_1|NZ_CP013249.1_824756_825788_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|213aa|up_0|NZ_CP013249.1_825797_826436_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|114aa|down_0|NZ_CP013249.1_828656_828998_+	NA	NA|553aa|down_1|NZ_CP013249.1_829242_830901_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|403aa|down_2|NZ_CP013249.1_831047_832256_+	COG3434, COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms]	NA|316aa|down_3|NZ_CP013249.1_832373_833321_+	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1105aa|down_4|NZ_CP013249.1_833745_837060_+	pfam17128, DUF5107, Domain of unknown function (DUF5107)	NA|476aa|down_5|NZ_CP013249.1_837139_838567_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|301aa|down_6|NZ_CP013249.1_838642_839545_-	cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB	NA|410aa|down_7|NZ_CP013249.1_839684_840914_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|732aa|down_8|NZ_CP013249.1_841220_843416_+	PRK09419, PRK09419, multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase	NA|392aa|down_9|NZ_CP013249.1_843507_844683_+	pfam07907, YibE_F, YibE/F-like protein
GCF_001879585.1_ASM187958v1	NZ_CP013248	Vibrio parahaemolyticus strain FORC_022 chromosome 1, complete sequence	1	2402779-2402890	1	CRISPRCasFinder	no		cas3,RT,DinG,csa3,csx1,DEDDh	Orphan	CAGCCATCGATGCCAATGCATCTTCTTC	28	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DinG,csa3,csx1,DEDDh,WYL,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|44aa|up_8|NZ_CP013248.1_2393162_2393294_-,NA|55aa|down_5|NZ_CP013248.1_2412936_2413101_+,NA|41aa|down_8|NZ_CP013248.1_2414253_2414376_+	NA|135aa|up_9|NZ_CP013248.1_2392742_2393147_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|44aa|up_8|NZ_CP013248.1_2393162_2393294_-	NA	NA|369aa|up_7|NZ_CP013248.1_2393536_2394643_-	PRK10693, PRK10693, two-component system response regulator RssB	NA|292aa|up_6|NZ_CP013248.1_2394917_2395793_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|505aa|up_5|NZ_CP013248.1_2395861_2397376_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|up_4|NZ_CP013248.1_2397412_2397904_-	PRK10845, PRK10845, colicin V production protein; Provisional	NA|203aa|up_3|NZ_CP013248.1_2397965_2398574_-	COG3147, DedD, Uncharacterized protein conserved in bacteria [Function unknown]	NA|421aa|up_2|NZ_CP013248.1_2398588_2399851_-	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|309aa|up_1|NZ_CP013248.1_2399896_2400823_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|265aa|up_0|NZ_CP013248.1_2401007_2401802_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|338aa|down_0|NZ_CP013248.1_2406454_2407468_-	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|378aa|down_1|NZ_CP013248.1_2407464_2408598_-	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains	NA|404aa|down_2|NZ_CP013248.1_2408996_2410208_-	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I	NA|673aa|down_3|NZ_CP013248.1_2410336_2412355_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|175aa|down_4|NZ_CP013248.1_2412458_2412983_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|55aa|down_5|NZ_CP013248.1_2412936_2413101_+	NA	NA|88aa|down_6|NZ_CP013248.1_2413262_2413526_-	pfam08891, YfcL, YfcL protein	NA|177aa|down_7|NZ_CP013248.1_2413550_2414081_-	pfam04315, EpmC, Elongation factor P hydroxylase	NA|41aa|down_8|NZ_CP013248.1_2414253_2414376_+	NA	NA|208aa|down_9|NZ_CP013248.1_2414413_2415037_+	COG2860, COG2860, Predicted membrane protein [Function unknown]
