assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001870205.1_ASM187020v1	NZ_CP017267	Vagococcus teuberi strain DSM 21459 chromosome, complete genome	1	247898-248003	1	CRISPRCasFinder	no		cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	Orphan	TTGCGTTAAGTGAAGTATGGCGTCTAATTTCTCGTGCAAA	40	0	0	NA	NA	NA	1	1	Orphan	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	NA,NA|189aa|down_3|NZ_CP017267.1_251097_251664_+	NA|374aa|up_9|NZ_CP017267.1_236856_237978_+	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|289aa|up_8|NZ_CP017267.1_238006_238873_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|147aa|up_7|NZ_CP017267.1_238898_239339_-	pfam04138, GtrA, GtrA-like protein	NA|593aa|up_6|NZ_CP017267.1_239331_241110_-	COG5617, COG5617, Predicted integral membrane protein [Function unknown]	NA|318aa|up_5|NZ_CP017267.1_241112_242066_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|227aa|up_4|NZ_CP017267.1_242205_242886_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|356aa|up_3|NZ_CP017267.1_242891_243959_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|135aa|up_2|NZ_CP017267.1_244021_244426_-	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|199aa|up_1|NZ_CP017267.1_244439_245036_-	pfam17924, TetR_C_19, Tetracyclin repressor-like, C-terminal domain	NA|205aa|up_0|NZ_CP017267.1_245898_246513_+	pfam06335, DUF1054, Protein of unknown function (DUF1054)	NA|259aa|down_0|NZ_CP017267.1_248793_249570_+	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|192aa|down_1|NZ_CP017267.1_249562_250138_+	TIGR00334, Ribonuclease_M5, ribonuclease M5	NA|299aa|down_2|NZ_CP017267.1_250130_251027_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|189aa|down_3|NZ_CP017267.1_251097_251664_+	NA	NA|369aa|down_4|NZ_CP017267.1_251713_252820_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|126aa|down_5|NZ_CP017267.1_252936_253314_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|175aa|down_6|NZ_CP017267.1_253520_254045_+	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family	NA|227aa|down_7|NZ_CP017267.1_254133_254814_+	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family	NA|164aa|down_8|NZ_CP017267.1_254886_255378_+	COG4894, COG4894, Uncharacterized conserved protein [Function unknown]	NA|578aa|down_9|NZ_CP017267.1_255435_257169_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
GCF_001870205.1_ASM187020v1	NZ_CP017267	Vagococcus teuberi strain DSM 21459 chromosome, complete genome	2	680341-681498	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	Type II-A, Type II-B, or Type II-C?,Type II-B,Type II-C	GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC,GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC,GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	17,17,17	17	TypeII-A,TypeII-B,orTypeII-C?,TypeII-B,TypeII-C	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	NA|63aa|up_6|NZ_CP017267.1_670707_670896_-,NA	NA|391aa|up_9|NZ_CP017267.1_667308_668481_-	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|208aa|up_8|NZ_CP017267.1_668633_669257_-	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|345aa|up_7|NZ_CP017267.1_669615_670650_-	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily	NA|63aa|up_6|NZ_CP017267.1_670707_670896_-	NA	NA|207aa|up_5|NZ_CP017267.1_671004_671625_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|81aa|up_4|NZ_CP017267.1_671770_672013_+	PRK02539, PRK02539, DUF896 family protein	NA|667aa|up_3|NZ_CP017267.1_672109_674110_+	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	cas9|1336aa|up_2|NZ_CP017267.1_674375_678383_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|289aa|up_1|NZ_CP017267.1_678382_679249_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|112aa|up_0|NZ_CP017267.1_679245_679581_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|487aa|down_0|NZ_CP017267.1_681531_682992_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|309aa|down_1|NZ_CP017267.1_683215_684142_+	TIGR03814, Glutaminase_1, glutaminase A	NA|503aa|down_2|NZ_CP017267.1_684229_685738_+	pfam05043, Mga, Mga helix-turn-helix domain	NA|614aa|down_3|NZ_CP017267.1_685939_687781_+	COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]	NA|413aa|down_4|NZ_CP017267.1_687804_689043_+	COG3919, COG3919, Predicted ATP-grasp enzyme [General function prediction only]	NA|237aa|down_5|NZ_CP017267.1_689054_689765_+	TIGR00035, Aspartate_racemase, aspartate racemase	NA|651aa|down_6|NZ_CP017267.1_689872_691825_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|325aa|down_7|NZ_CP017267.1_691821_692796_+	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|179aa|down_8|NZ_CP017267.1_692867_693404_+	COG1268, BioY, Uncharacterized conserved protein [General function prediction only]	NA|302aa|down_9|NZ_CP017267.1_693477_694383_-	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands
GCF_001870205.1_ASM187020v1	NZ_CP017267	Vagococcus teuberi strain DSM 21459 chromosome, complete genome	3	1207085-1207168	3	CRISPRCasFinder	no	cas3	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	Unclear	TTCTAACAAACCACCTAAGAAATGATA	27	0	0	NA	NA	NA	1	1	Unclear	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	NA|85aa|up_3|NZ_CP017267.1_1204496_1204751_-,NA	NA|924aa|up_9|NZ_CP017267.1_1196005_1198777_-	COG3933, COG3933, Transcriptional antiterminator [Transcription]	cas3|449aa|up_8|NZ_CP017267.1_1198859_1200206_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|314aa|up_7|NZ_CP017267.1_1200254_1201196_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|380aa|up_6|NZ_CP017267.1_1201196_1202336_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|285aa|up_5|NZ_CP017267.1_1202406_1203261_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|343aa|up_4|NZ_CP017267.1_1203348_1204377_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|85aa|up_3|NZ_CP017267.1_1204496_1204751_-	NA	NA|187aa|up_2|NZ_CP017267.1_1204833_1205394_-	PRK00529, PRK00529, elongation factor P; Validated	NA|171aa|up_1|NZ_CP017267.1_1205534_1206047_-	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|109aa|up_0|NZ_CP017267.1_1206213_1206540_+	PRK00967, PRK00967, hypothetical protein; Provisional	NA|111aa|down_0|NZ_CP017267.1_1208016_1208349_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|417aa|down_1|NZ_CP017267.1_1208458_1209709_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|415aa|down_2|NZ_CP017267.1_1209692_1210937_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|313aa|down_3|NZ_CP017267.1_1210952_1211891_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|242aa|down_4|NZ_CP017267.1_1211883_1212609_-	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins	NA|56aa|down_5|NZ_CP017267.1_1212740_1212908_+	pfam11240, DUF3042, Protein of unknown function (DUF3042)	NA|196aa|down_6|NZ_CP017267.1_1212969_1213557_+	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily	NA|325aa|down_7|NZ_CP017267.1_1213641_1214616_+	cd00542, Ntn_PVA, Penicillin V acylase (PVA), also known as conjugated bile salt acid hydrolase (CBAH), catalyzes the hydrolysis of penicillin V to yield 6-amino penicillanic acid (6-APA), an important key intermediate of semisynthetic penicillins	NA|131aa|down_8|NZ_CP017267.1_1214649_1215042_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|324aa|down_9|NZ_CP017267.1_1215064_1216036_-	TIGR00744, Glucokinase_Glucose_kinase
GCF_001870205.1_ASM187020v1	NZ_CP017267	Vagococcus teuberi strain DSM 21459 chromosome, complete genome	4	2047586-2047673	4	CRISPRCasFinder	no		cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	Orphan	GGCTCTATAATTTCTACTGTTGGTAAC	27	1	1	2047613-2047646	NZ_CP017267.1_1645680-1645713	NA	1	1	Orphan	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	NA|53aa|up_9|NZ_CP017267.1_2033486_2033645_-,NA	NA|53aa|up_9|NZ_CP017267.1_2033486_2033645_-	NA	NA|189aa|up_8|NZ_CP017267.1_2033750_2034317_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|327aa|up_7|NZ_CP017267.1_2034351_2035332_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|572aa|up_6|NZ_CP017267.1_2035750_2037466_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|1073aa|up_5|NZ_CP017267.1_2037543_2040762_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|1044aa|up_4|NZ_CP017267.1_2040773_2043905_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|378aa|up_3|NZ_CP017267.1_2043915_2045049_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|213aa|up_2|NZ_CP017267.1_2045648_2046287_-	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	NA|248aa|up_1|NZ_CP017267.1_2046418_2047162_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|88aa|up_0|NZ_CP017267.1_2047148_2047412_+	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|1516aa|down_0|NZ_CP017267.1_2049184_2053732_-	pfam05738, Cna_B, Cna protein B-type domain	NA|257aa|down_1|NZ_CP017267.1_2053995_2054766_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|291aa|down_2|NZ_CP017267.1_2054862_2055735_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|351aa|down_3|NZ_CP017267.1_2055886_2056939_-	pfam04892, VanZ, VanZ like family	NA|106aa|down_4|NZ_CP017267.1_2056975_2057293_-	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|505aa|down_5|NZ_CP017267.1_2058507_2060022_-	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|508aa|down_6|NZ_CP017267.1_2060859_2062383_-	TIGR03813, put_Glu_GABA_T, putative glutamate/gamma-aminobutyrate antiporter	NA|468aa|down_7|NZ_CP017267.1_2062405_2063809_-	pfam03577, Peptidase_C69, Peptidase family C69	NA|444aa|down_8|NZ_CP017267.1_2063838_2065170_-	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)	NA|473aa|down_9|NZ_CP017267.1_2065195_2066614_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter
GCF_001870205.1_ASM187020v1	NZ_CP017267	Vagococcus teuberi strain DSM 21459 chromosome, complete genome	5	2117021-2117128	5	CRISPRCasFinder	no		cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	Orphan	CCCCTTCAAACCCTAAGCGTAACAC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,cas9,cas1,cas2,DEDDh,DinG,WYL,csa3	NA,NA	NA|293aa|up_9|NZ_CP017267.1_2109988_2110867_-	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|280aa|up_8|NZ_CP017267.1_2110842_2111682_-	PRK13635, cbiO, energy-coupling factor ABC transporter ATP-binding protein	NA|129aa|up_7|NZ_CP017267.1_2111944_2112331_-	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|313aa|up_6|NZ_CP017267.1_2112360_2113299_-	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|130aa|up_5|NZ_CP017267.1_2113376_2113766_-	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|122aa|up_4|NZ_CP017267.1_2113794_2114160_-	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|38aa|up_3|NZ_CP017267.1_2114177_2114291_-	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed	NA|73aa|up_2|NZ_CP017267.1_2114323_2114542_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|218aa|up_1|NZ_CP017267.1_2114728_2115382_-	PRK00279, adk, adenylate kinase; Reviewed	NA|433aa|up_0|NZ_CP017267.1_2115438_2116737_-	PRK09204, secY, preprotein translocase subunit SecY; Reviewed	NA|60aa|down_0|NZ_CP017267.1_2117302_2117482_-	PRK05611, rpmD, 50S ribosomal protein L30; Reviewed	NA|167aa|down_1|NZ_CP017267.1_2117494_2117995_-	PRK00550, rpsE, 30S ribosomal protein S5; Validated	NA|119aa|down_2|NZ_CP017267.1_2118015_2118372_-	PRK05593, rplR, 50S ribosomal protein L18; Reviewed	NA|179aa|down_3|NZ_CP017267.1_2118397_2118934_-	PRK05498, rplF, 50S ribosomal protein L6; Validated	NA|133aa|down_4|NZ_CP017267.1_2118963_2119362_-	PRK00136, rpsH, 30S ribosomal protein S8; Validated	NA|62aa|down_5|NZ_CP017267.1_2119396_2119582_-	PRK08061, rpsN, type Z 30S ribosomal protein S14	NA|180aa|down_6|NZ_CP017267.1_2119600_2120140_-	PRK00010, rplE, 50S ribosomal protein L5; Validated	NA|104aa|down_7|NZ_CP017267.1_2120166_2120478_-	PRK00004, rplX, 50S ribosomal protein L24; Reviewed	NA|123aa|down_8|NZ_CP017267.1_2120512_2120881_-	PRK05483, rplN, 50S ribosomal protein L14; Validated	NA|89aa|down_9|NZ_CP017267.1_2120931_2121198_-	PRK05610, rpsQ, 30S ribosomal protein S17; Reviewed
