assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	1	257194-258341	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no	cas6,cas10,csm2gr11,csm3gr7,c2c9_V-U4	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Type III-B,Type III-C,Type III-A,Type III-D	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC,GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC,GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	15,14,14	15	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA,NA|203aa|down_2|NZ_CP017920.1_260778_261387_-,NA|104aa|down_3|NZ_CP017920.1_261806_262118_-,NA|86aa|down_4|NZ_CP017920.1_262222_262480_-,NA|64aa|down_6|NZ_CP017920.1_264065_264257_-,NA|135aa|down_7|NZ_CP017920.1_264253_264658_-,NA|85aa|down_8|NZ_CP017920.1_264805_265060_+	NA|90aa|up_9|NZ_CP017920.1_247181_247451_+	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]	NA|182aa|up_8|NZ_CP017920.1_247447_247993_+	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|up_7|NZ_CP017920.1_248297_249185_+	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|295aa|up_6|NZ_CP017920.1_249187_250072_+	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|182aa|up_5|NZ_CP017920.1_250343_250889_+	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	cas6|315aa|up_4|NZ_CP017920.1_251066_252011_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas10|813aa|up_3|NZ_CP017920.1_252007_254446_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|125aa|up_2|NZ_CP017920.1_254442_254817_+	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	csm3gr7|237aa|up_1|NZ_CP017920.1_254826_255537_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	NA|421aa|up_0|NZ_CP017920.1_255900_257162_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|271aa|down_0|NZ_CP017920.1_258489_259302_-	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|470aa|down_1|NZ_CP017920.1_259298_260708_-	pfam00665, rve, Integrase core domain	NA|203aa|down_2|NZ_CP017920.1_260778_261387_-	NA	NA|104aa|down_3|NZ_CP017920.1_261806_262118_-	NA	NA|86aa|down_4|NZ_CP017920.1_262222_262480_-	NA	NA|385aa|down_5|NZ_CP017920.1_262712_263867_-	pfam00665, rve, Integrase core domain	NA|64aa|down_6|NZ_CP017920.1_264065_264257_-	NA	NA|135aa|down_7|NZ_CP017920.1_264253_264658_-	NA	NA|85aa|down_8|NZ_CP017920.1_264805_265060_+	NA	NA|92aa|down_9|NZ_CP017920.1_265235_265511_-	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	2	1216447-1216588	2	CRISPRCasFinder	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	TGAGTATTCCGTCGGTGACGGTTCCGCCGATCACGATTCCGGCTGGCAC	49	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|127aa|up_5|NZ_CP017920.1_1208549_1208930_+,NA|107aa|down_1|NZ_CP017920.1_1221115_1221436_-,NA|136aa|down_4|NZ_CP017920.1_1228795_1229203_+	NA|256aa|up_9|NZ_CP017920.1_1204262_1205030_+	PRK05867, PRK05867, SDR family oxidoreductase	NA|258aa|up_8|NZ_CP017920.1_1205033_1205807_-	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|160aa|up_7|NZ_CP017920.1_1206043_1206523_+	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|621aa|up_6|NZ_CP017920.1_1206530_1208393_-	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|127aa|up_5|NZ_CP017920.1_1208549_1208930_+	NA	NA|447aa|up_4|NZ_CP017920.1_1208966_1210307_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|372aa|up_3|NZ_CP017920.1_1210297_1211413_-	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|424aa|up_2|NZ_CP017920.1_1211684_1212956_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|288aa|up_1|NZ_CP017920.1_1212993_1213857_-	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|155aa|up_0|NZ_CP017920.1_1213954_1214419_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|421aa|down_0|NZ_CP017920.1_1219827_1221089_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|107aa|down_1|NZ_CP017920.1_1221115_1221436_-	NA	NA|337aa|down_2|NZ_CP017920.1_1224213_1225224_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|767aa|down_3|NZ_CP017920.1_1226360_1228661_-	PLN02892, PLN02892, isocitrate lyase	NA|136aa|down_4|NZ_CP017920.1_1228795_1229203_+	NA	NA|251aa|down_5|NZ_CP017920.1_1229180_1229933_-	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|335aa|down_6|NZ_CP017920.1_1230032_1231037_+	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|202aa|down_7|NZ_CP017920.1_1231136_1231742_+	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|198aa|down_8|NZ_CP017920.1_1231824_1232418_+	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|148aa|down_9|NZ_CP017920.1_1232531_1232975_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	3	1326865-1327860	2	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	GNCGGCGGGGCCGGCGGC	18	2	5	1327006-1327026|1327006-1327026|1327006-1327026|1327006-1327026|1327105-1327125	NZ_CP017920.1_1017189-1017209|NZ_CP017920.1_1883344-1883364|NZ_CP017920.1_1883503-1883523|NZ_CP017920.1_2211604-2211624|NZ_CP017920.1_2282120-2282100	NA	16	16	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA,NA|222aa|down_2|NZ_CP017920.1_1330934_1331600_-	NA|248aa|up_9|NZ_CP017920.1_1315294_1316038_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|163aa|up_8|NZ_CP017920.1_1316034_1316523_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|135aa|up_7|NZ_CP017920.1_1316762_1317167_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_6|NZ_CP017920.1_1317204_1318083_-	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_5|NZ_CP017920.1_1318099_1318432_-	COG3856, Sbp, Uncharacterized conserved protein (small basic protein) [Function unknown]	NA|308aa|up_4|NZ_CP017920.1_1318493_1319417_-	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|210aa|up_3|NZ_CP017920.1_1319409_1320039_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|809aa|up_2|NZ_CP017920.1_1320235_1322662_-	PRK12326, PRK12326, preprotein translocase subunit SecA; Reviewed	NA|548aa|up_1|NZ_CP017920.1_1322676_1324320_-	PRK05858, PRK05858, acetolactate synthase	NA|640aa|up_0|NZ_CP017920.1_1324390_1326310_+	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]	NA|488aa|down_0|NZ_CP017920.1_1328069_1329533_-	PRK07121, PRK07121, FAD-binding protein	NA|235aa|down_1|NZ_CP017920.1_1330167_1330872_-	pfam13305, WHG, WHG domain	NA|222aa|down_2|NZ_CP017920.1_1330934_1331600_-	NA	NA|301aa|down_3|NZ_CP017920.1_1331704_1332607_-	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|144aa|down_4|NZ_CP017920.1_1333015_1333447_+	pfam13827, DUF4189, Domain of unknown function (DUF4189)	NA|401aa|down_5|NZ_CP017920.1_1333768_1334971_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|235aa|down_6|NZ_CP017920.1_1334980_1335685_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|119aa|down_7|NZ_CP017920.1_1335838_1336195_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|469aa|down_8|NZ_CP017920.1_1336439_1337846_-	pfam00823, PPE, PPE family	NA|410aa|down_9|NZ_CP017920.1_1337977_1339207_-	pfam00823, PPE, PPE family
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	4	1734748-1734994	2	PILER-CR	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CGGCGGAGTCGGCGGGGCCGGCGGGCCCGGCGGGCCCGGCGGG	43	2	2	1734791-1734877|1734921-1734961	NZ_CP017920.1_1738555-1738641|NZ_CP017920.1_1738684-1738724	NA	2	2	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|288aa|up_2|NZ_CP017920.1_1730972_1731836_-,NA|137aa|down_7|NZ_CP017920.1_1749208_1749619_+,NA|38aa|down_8|NZ_CP017920.1_1749668_1749782_+	NA|398aa|up_9|NZ_CP017920.1_1721743_1722937_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|847aa|up_8|NZ_CP017920.1_1722933_1725474_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|269aa|up_7|NZ_CP017920.1_1725470_1726277_-	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|592aa|up_6|NZ_CP017920.1_1726324_1728100_+	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|314aa|up_5|NZ_CP017920.1_1728255_1729197_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|262aa|up_4|NZ_CP017920.1_1729193_1729979_+	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|311aa|up_3|NZ_CP017920.1_1730090_1731023_+	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|288aa|up_2|NZ_CP017920.1_1730972_1731836_-	NA	NA|329aa|up_1|NZ_CP017920.1_1731855_1732842_+	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|422aa|up_0|NZ_CP017920.1_1732869_1734135_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|309aa|down_0|NZ_CP017920.1_1736740_1737667_-	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|1399aa|down_1|NZ_CP017920.1_1738068_1742265_+	pfam00934, PE, PE family	NA|701aa|down_2|NZ_CP017920.1_1742703_1744806_+	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|374aa|down_3|NZ_CP017920.1_1744822_1745944_+	PRK03343, PRK03343, transaldolase; Validated	NA|515aa|down_4|NZ_CP017920.1_1745940_1747485_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|305aa|down_5|NZ_CP017920.1_1747537_1748452_+	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|248aa|down_6|NZ_CP017920.1_1748448_1749192_+	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|137aa|down_7|NZ_CP017920.1_1749208_1749619_+	NA	NA|38aa|down_8|NZ_CP017920.1_1749668_1749782_+	NA	NA|162aa|down_9|NZ_CP017920.1_1750213_1750699_+	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	5	2184423-2184593	3	PILER-CR	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	TGCTCGGCGACGGCGGCAACGGCGGCAACGGCGGCAAGGGCG	42	0	0	NA	NA	NA	2	2	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA,NA	NA|465aa|up_9|NZ_CP017920.1_2169793_2171188_-	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|298aa|up_8|NZ_CP017920.1_2171244_2172138_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|315aa|up_7|NZ_CP017920.1_2172534_2173479_+	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|406aa|up_6|NZ_CP017920.1_2173531_2174749_+	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|284aa|up_5|NZ_CP017920.1_2174822_2175674_-	pfam18741, MTES_1575, REase_MTES_1575	NA|279aa|up_4|NZ_CP017920.1_2175789_2176626_-	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|346aa|up_3|NZ_CP017920.1_2176812_2177850_+	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|258aa|up_2|NZ_CP017920.1_2177861_2178635_+	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|588aa|up_1|NZ_CP017920.1_2178631_2180395_+	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|513aa|up_0|NZ_CP017920.1_2180756_2182295_+	pfam00934, PE, PE family	NA|132aa|down_0|NZ_CP017920.1_2184712_2185108_-	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|189aa|down_1|NZ_CP017920.1_2185104_2185671_-	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|140aa|down_2|NZ_CP017920.1_2185782_2186202_+	pfam17301, LpqV, Putative lipoprotein LpqV	NA|361aa|down_3|NZ_CP017920.1_2186282_2187365_+	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|286aa|down_4|NZ_CP017920.1_2187365_2188223_-	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|288aa|down_5|NZ_CP017920.1_2188227_2189091_-	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|158aa|down_6|NZ_CP017920.1_2189124_2189598_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|355aa|down_7|NZ_CP017920.1_2189650_2190715_-	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|544aa|down_8|NZ_CP017920.1_2190790_2192422_-	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|394aa|down_9|NZ_CP017920.1_2192529_2193711_-	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	6	2532183-2532298	4	PILER-CR	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCGGCGGGGACGGCGGGGCCGGCGGC	26	1	3	2532254-2532272|2532254-2532272|2532254-2532272	NZ_CP017920.1_659209-659227|NZ_CP017920.1_4002281-4002263|NZ_CP017920.1_4414400-4414418	NA	2	2	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|82aa|up_4|NZ_CP017920.1_2530556_2530802_-,NA|53aa|up_3|NZ_CP017920.1_2530816_2530975_-,NA|46aa|up_2|NZ_CP017920.1_2530960_2531098_+,NA|186aa|down_4|NZ_CP017920.1_2538262_2538820_+,NA|176aa|down_6|NZ_CP017920.1_2540402_2540930_-,NA|71aa|down_9|NZ_CP017920.1_2542794_2543007_-	NA|646aa|up_9|NZ_CP017920.1_2522794_2524732_+	pfam00823, PPE, PPE family	NA|585aa|up_8|NZ_CP017920.1_2524921_2526676_-	pfam00934, PE, PE family	NA|511aa|up_7|NZ_CP017920.1_2526881_2528414_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|391aa|up_6|NZ_CP017920.1_2528420_2529593_+	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|295aa|up_5|NZ_CP017920.1_2529603_2530488_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|82aa|up_4|NZ_CP017920.1_2530556_2530802_-	NA	NA|53aa|up_3|NZ_CP017920.1_2530816_2530975_-	NA	NA|46aa|up_2|NZ_CP017920.1_2530960_2531098_+	NA	NA|143aa|up_1|NZ_CP017920.1_2531178_2531607_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|86aa|up_0|NZ_CP017920.1_2531630_2531888_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|785aa|down_0|NZ_CP017920.1_2534650_2537005_-	pfam00934, PE, PE family	NA|176aa|down_1|NZ_CP017920.1_2537024_2537552_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|49aa|down_2|NZ_CP017920.1_2537500_2537647_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|169aa|down_3|NZ_CP017920.1_2537759_2538266_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|186aa|down_4|NZ_CP017920.1_2538262_2538820_+	NA	NA|176aa|down_5|NZ_CP017920.1_2539197_2539725_-	pfam00934, PE, PE family	NA|176aa|down_6|NZ_CP017920.1_2540402_2540930_-	NA	NA|283aa|down_7|NZ_CP017920.1_2541044_2541893_-	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|183aa|down_8|NZ_CP017920.1_2542097_2542646_-	TIGR03086, TIGR03086, TIGR03086 family protein	NA|71aa|down_9|NZ_CP017920.1_2542794_2543007_-	NA
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	7	2535495-2535652	3	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCGCCGGCCCCGCCGGCCCCGCC	23	0	0	NA	NA	NA	3	3	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|82aa|up_5|NZ_CP017920.1_2530556_2530802_-,NA|53aa|up_4|NZ_CP017920.1_2530816_2530975_-,NA|46aa|up_3|NZ_CP017920.1_2530960_2531098_+,NA|186aa|down_3|NZ_CP017920.1_2538262_2538820_+,NA|176aa|down_5|NZ_CP017920.1_2540402_2540930_-,NA|71aa|down_8|NZ_CP017920.1_2542794_2543007_-	NA|585aa|up_9|NZ_CP017920.1_2524921_2526676_-	pfam00934, PE, PE family	NA|511aa|up_8|NZ_CP017920.1_2526881_2528414_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|391aa|up_7|NZ_CP017920.1_2528420_2529593_+	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|295aa|up_6|NZ_CP017920.1_2529603_2530488_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|82aa|up_5|NZ_CP017920.1_2530556_2530802_-	NA	NA|53aa|up_4|NZ_CP017920.1_2530816_2530975_-	NA	NA|46aa|up_3|NZ_CP017920.1_2530960_2531098_+	NA	NA|143aa|up_2|NZ_CP017920.1_2531178_2531607_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|86aa|up_1|NZ_CP017920.1_2531630_2531888_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|758aa|up_0|NZ_CP017920.1_2531978_2534252_-	pfam00934, PE, PE family	NA|176aa|down_0|NZ_CP017920.1_2537024_2537552_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|49aa|down_1|NZ_CP017920.1_2537500_2537647_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|169aa|down_2|NZ_CP017920.1_2537759_2538266_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|186aa|down_3|NZ_CP017920.1_2538262_2538820_+	NA	NA|176aa|down_4|NZ_CP017920.1_2539197_2539725_-	pfam00934, PE, PE family	NA|176aa|down_5|NZ_CP017920.1_2540402_2540930_-	NA	NA|283aa|down_6|NZ_CP017920.1_2541044_2541893_-	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|183aa|down_7|NZ_CP017920.1_2542097_2542646_-	TIGR03086, TIGR03086, TIGR03086 family protein	NA|71aa|down_8|NZ_CP017920.1_2542794_2543007_-	NA	NA|166aa|down_9|NZ_CP017920.1_2543003_2543501_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	8	2681268-2681344	3	CRISPRCasFinder	no	c2c9_V-U4	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Type V-U4	ACCCGCGCTCACGCCGCACCTCA	23	0	0	NA	NA	NA	1	1	TypeV-U4	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA,NA	NA|104aa|up_9|NZ_CP017920.1_2673201_2673513_-	pfam03413, PepSY, Peptidase propeptide and YPEB domain	NA|254aa|up_8|NZ_CP017920.1_2673569_2674331_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|157aa|up_7|NZ_CP017920.1_2674374_2674845_+	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|169aa|up_6|NZ_CP017920.1_2674958_2675465_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|79aa|up_5|NZ_CP017920.1_2675568_2675805_+	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|138aa|up_4|NZ_CP017920.1_2675801_2676215_+	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|412aa|up_3|NZ_CP017920.1_2676465_2677701_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|86aa|up_2|NZ_CP017920.1_2677883_2678141_+	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|131aa|up_1|NZ_CP017920.1_2678137_2678530_+	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|517aa|up_0|NZ_CP017920.1_2678581_2680132_-	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|482aa|down_0|NZ_CP017920.1_2682864_2684310_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|405aa|down_1|NZ_CP017920.1_2685335_2686550_-	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|296aa|down_2|NZ_CP017920.1_2686555_2687443_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|266aa|down_3|NZ_CP017920.1_2687444_2688242_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|241aa|down_4|NZ_CP017920.1_2688238_2688961_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|796aa|down_5|NZ_CP017920.1_2689098_2691486_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|878aa|down_6|NZ_CP017920.1_2691508_2694142_-	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|229aa|down_7|NZ_CP017920.1_2694295_2694982_+	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|136aa|down_8|NZ_CP017920.1_2695041_2695449_-	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|72aa|down_9|NZ_CP017920.1_2695445_2695661_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	9	2947808-2947955	5	PILER-CR	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CACCGGCAACATCGGCTTCGGCAACACCGGAAACGGAAACAT	42	1	9	2947923-2947940|2947923-2947940|2947923-2947940|2947923-2947940|2947923-2947940|2947923-2947940|2947923-2947940|2947923-2947940|2947923-2947940	NZ_CP017920.1_1219062-1219079|NZ_CP017920.1_2939564-2939581|NZ_CP017920.1_2942249-2942266|NZ_CP017920.1_2946650-2946667|NZ_CP017920.1_2948108-2948125|NZ_CP017920.1_3003804-3003821|NZ_CP017920.1_4017843-4017860|NZ_CP017920.1_4023287-4023304|NZ_CP017920.1_4035219-4035236	NA	2	2	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|276aa|up_5|NZ_CP017920.1_2933775_2934603_-,NA|216aa|up_2|NZ_CP017920.1_2935917_2936565_-,NA|220aa|down_4|NZ_CP017920.1_2953748_2954408_-,NA|218aa|down_5|NZ_CP017920.1_2954410_2955064_-	NA|377aa|up_9|NZ_CP017920.1_2929227_2930358_+	COG4833, COG4833, Predicted glycosyl hydrolase [Carbohydrate transport and metabolism]	NA|228aa|up_8|NZ_CP017920.1_2930346_2931030_-	PRK10847, PRK10847, DedA family protein	NA|345aa|up_7|NZ_CP017920.1_2931125_2932160_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|461aa|up_6|NZ_CP017920.1_2932171_2933554_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|276aa|up_5|NZ_CP017920.1_2933775_2934603_-	NA	NA|146aa|up_4|NZ_CP017920.1_2934685_2935123_+	pfam11349, DUF3151, Protein of unknown function (DUF3151)	NA|260aa|up_3|NZ_CP017920.1_2935127_2935907_-	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|216aa|up_2|NZ_CP017920.1_2935917_2936565_-	NA	NA|433aa|up_1|NZ_CP017920.1_2936655_2937954_+	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|215aa|up_0|NZ_CP017920.1_2937950_2938595_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|127aa|down_0|NZ_CP017920.1_2949337_2949718_-	cd01279, HTH_HspR-like, Helix-Turn-Helix DNA binding domain of HspR-like transcription regulators	NA|396aa|down_1|NZ_CP017920.1_2949717_2950905_-	PRK14279, PRK14279, molecular chaperone DnaJ	NA|236aa|down_2|NZ_CP017920.1_2950940_2951648_-	PRK14142, PRK14142, heat shock protein GrpE; Provisional	NA|626aa|down_3|NZ_CP017920.1_2951644_2953522_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|220aa|down_4|NZ_CP017920.1_2953748_2954408_-	NA	NA|218aa|down_5|NZ_CP017920.1_2954410_2955064_-	NA	NA|329aa|down_6|NZ_CP017920.1_2955066_2956053_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|488aa|down_7|NZ_CP017920.1_2956391_2957855_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|137aa|down_8|NZ_CP017920.1_2957896_2958307_-	COG2068, COG2068, Uncharacterized MobA-related protein [General function prediction only]	NA|187aa|down_9|NZ_CP017920.1_2958415_2958976_+	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	10	3010604-3010700	4	CRISPRCasFinder	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCCGCCGTTGCCACCGTTGCCGAA	24	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|161aa|up_8|NZ_CP017920.1_2996301_2996784_+,NA|101aa|up_1|NZ_CP017920.1_3009562_3009865_-,NA	NA|239aa|up_9|NZ_CP017920.1_2995527_2996244_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|161aa|up_8|NZ_CP017920.1_2996301_2996784_+	NA	NA|224aa|up_7|NZ_CP017920.1_2996771_2997443_-	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|3182aa|up_6|NZ_CP017920.1_2997645_3007191_+	pfam00823, PPE, PPE family	NA|303aa|up_5|NZ_CP017920.1_3007198_3008107_-	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|211aa|up_4|NZ_CP017920.1_3008103_3008736_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|142aa|up_3|NZ_CP017920.1_3008871_3009297_-	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|74aa|up_2|NZ_CP017920.1_3009293_3009515_-	PHA01748, PHA01748, hypothetical protein	NA|101aa|up_1|NZ_CP017920.1_3009562_3009865_-	NA	NA|76aa|up_0|NZ_CP017920.1_3009861_3010089_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|466aa|down_0|NZ_CP017920.1_3012185_3013583_+	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|268aa|down_1|NZ_CP017920.1_3013592_3014396_+	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|262aa|down_2|NZ_CP017920.1_3014384_3015170_-	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|401aa|down_3|NZ_CP017920.1_3015276_3016479_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|332aa|down_4|NZ_CP017920.1_3016465_3017461_-	TIGR03923, T7SS_EccE, type VII secretion protein EccE	NA|462aa|down_5|NZ_CP017920.1_3017457_3018843_-	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|473aa|down_6|NZ_CP017920.1_3018839_3020258_-	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|296aa|down_7|NZ_CP017920.1_3020304_3021192_-	pfam14011, ESX-1_EspG, EspG family	NA|97aa|down_8|NZ_CP017920.1_3021202_3021493_-	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|down_9|NZ_CP017920.1_3021522_3021816_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	11	3010781-3011051	5	CRISPRCasFinder	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCCGCCGTTGCCACCGTTGCCGAA	24	0	0	NA	NA	NA	4	4	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|161aa|up_8|NZ_CP017920.1_2996301_2996784_+,NA|101aa|up_1|NZ_CP017920.1_3009562_3009865_-,NA	NA|239aa|up_9|NZ_CP017920.1_2995527_2996244_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|161aa|up_8|NZ_CP017920.1_2996301_2996784_+	NA	NA|224aa|up_7|NZ_CP017920.1_2996771_2997443_-	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|3182aa|up_6|NZ_CP017920.1_2997645_3007191_+	pfam00823, PPE, PPE family	NA|303aa|up_5|NZ_CP017920.1_3007198_3008107_-	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|211aa|up_4|NZ_CP017920.1_3008103_3008736_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|142aa|up_3|NZ_CP017920.1_3008871_3009297_-	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|74aa|up_2|NZ_CP017920.1_3009293_3009515_-	PHA01748, PHA01748, hypothetical protein	NA|101aa|up_1|NZ_CP017920.1_3009562_3009865_-	NA	NA|76aa|up_0|NZ_CP017920.1_3009861_3010089_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|466aa|down_0|NZ_CP017920.1_3012185_3013583_+	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|268aa|down_1|NZ_CP017920.1_3013592_3014396_+	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|262aa|down_2|NZ_CP017920.1_3014384_3015170_-	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|401aa|down_3|NZ_CP017920.1_3015276_3016479_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|332aa|down_4|NZ_CP017920.1_3016465_3017461_-	TIGR03923, T7SS_EccE, type VII secretion protein EccE	NA|462aa|down_5|NZ_CP017920.1_3017457_3018843_-	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|473aa|down_6|NZ_CP017920.1_3018839_3020258_-	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|296aa|down_7|NZ_CP017920.1_3020304_3021192_-	pfam14011, ESX-1_EspG, EspG family	NA|97aa|down_8|NZ_CP017920.1_3021202_3021493_-	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|down_9|NZ_CP017920.1_3021522_3021816_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	12	3011321-3011662	6	CRISPRCasFinder	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCCGCCGTTGCCACCGTTGCCGAA	24	1	1	3011345-3011365	NZ_CP017920.1_3241228-3241248	NA	5	5	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|161aa|up_8|NZ_CP017920.1_2996301_2996784_+,NA|101aa|up_1|NZ_CP017920.1_3009562_3009865_-,NA	NA|239aa|up_9|NZ_CP017920.1_2995527_2996244_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|161aa|up_8|NZ_CP017920.1_2996301_2996784_+	NA	NA|224aa|up_7|NZ_CP017920.1_2996771_2997443_-	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|3182aa|up_6|NZ_CP017920.1_2997645_3007191_+	pfam00823, PPE, PPE family	NA|303aa|up_5|NZ_CP017920.1_3007198_3008107_-	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|211aa|up_4|NZ_CP017920.1_3008103_3008736_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|142aa|up_3|NZ_CP017920.1_3008871_3009297_-	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|74aa|up_2|NZ_CP017920.1_3009293_3009515_-	PHA01748, PHA01748, hypothetical protein	NA|101aa|up_1|NZ_CP017920.1_3009562_3009865_-	NA	NA|76aa|up_0|NZ_CP017920.1_3009861_3010089_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|466aa|down_0|NZ_CP017920.1_3012185_3013583_+	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|268aa|down_1|NZ_CP017920.1_3013592_3014396_+	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|262aa|down_2|NZ_CP017920.1_3014384_3015170_-	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|401aa|down_3|NZ_CP017920.1_3015276_3016479_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|332aa|down_4|NZ_CP017920.1_3016465_3017461_-	TIGR03923, T7SS_EccE, type VII secretion protein EccE	NA|462aa|down_5|NZ_CP017920.1_3017457_3018843_-	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|473aa|down_6|NZ_CP017920.1_3018839_3020258_-	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|296aa|down_7|NZ_CP017920.1_3020304_3021192_-	pfam14011, ESX-1_EspG, EspG family	NA|97aa|down_8|NZ_CP017920.1_3021202_3021493_-	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|down_9|NZ_CP017920.1_3021522_3021816_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	13	3038865-3039942	4	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CGGNGCCGGCGGNNNCGGCGG	21	1	5	3039859-3039882|3039859-3039882|3039859-3039882|3039859-3039882|3039859-3039882	NZ_CP017920.1_3036853-3036876|NZ_CP017920.1_949713-949736|NZ_CP017920.1_2532129-2532106|NZ_CP017920.1_1515681-1515704|NZ_CP017920.1_2445735-2445712	NA	20	20	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA,NA|61aa|down_0|NZ_CP017920.1_3040141_3040324_+	NA|97aa|up_9|NZ_CP017920.1_3021202_3021493_-	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|up_8|NZ_CP017920.1_3021522_3021816_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|514aa|up_7|NZ_CP017920.1_3021864_3023406_-	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|103aa|up_6|NZ_CP017920.1_3023408_3023717_-	pfam00934, PE, PE family	NA|1331aa|up_5|NZ_CP017920.1_3023713_3027706_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|539aa|up_4|NZ_CP017920.1_3027702_3029319_-	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|632aa|up_3|NZ_CP017920.1_3029315_3031211_-	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|303aa|up_2|NZ_CP017920.1_3031434_3032343_-	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|537aa|up_1|NZ_CP017920.1_3032366_3033977_-	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|903aa|up_0|NZ_CP017920.1_3034267_3036976_+	pfam00934, PE, PE family	NA|61aa|down_0|NZ_CP017920.1_3040141_3040324_+	NA	NA|143aa|down_1|NZ_CP017920.1_3040347_3040776_+	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|307aa|down_2|NZ_CP017920.1_3040815_3041736_-	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|242aa|down_3|NZ_CP017920.1_3041825_3042551_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|down_4|NZ_CP017920.1_3042480_3043062_-	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|207aa|down_5|NZ_CP017920.1_3043158_3043779_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|378aa|down_6|NZ_CP017920.1_3043775_3044909_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|732aa|down_7|NZ_CP017920.1_3045022_3047218_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|561aa|down_8|NZ_CP017920.1_3047234_3048917_-	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|398aa|down_9|NZ_CP017920.1_3048952_3050146_+	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	14	3672933-3673021	7	CRISPRCasFinder	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	GGCCGTCATCCGGCCCGCATCGTCGCCGAGC	31	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|126aa|up_6|NZ_CP017920.1_3667319_3667697_-,NA|233aa|down_0|NZ_CP017920.1_3673217_3673916_+,NA|52aa|down_2|NZ_CP017920.1_3675917_3676073_-,NA|119aa|down_3|NZ_CP017920.1_3676172_3676529_-,NA|257aa|down_8|NZ_CP017920.1_3681663_3682434_+	NA|152aa|up_9|NZ_CP017920.1_3665184_3665640_+	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|265aa|up_8|NZ_CP017920.1_3665646_3666441_+	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|225aa|up_7|NZ_CP017920.1_3666546_3667221_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|126aa|up_6|NZ_CP017920.1_3667319_3667697_-	NA	NA|246aa|up_5|NZ_CP017920.1_3667804_3668542_+	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|228aa|up_4|NZ_CP017920.1_3668541_3669225_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|274aa|up_3|NZ_CP017920.1_3669356_3670178_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|398aa|up_2|NZ_CP017920.1_3670183_3671377_+	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|328aa|up_1|NZ_CP017920.1_3671369_3672353_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|173aa|up_0|NZ_CP017920.1_3672353_3672872_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|233aa|down_0|NZ_CP017920.1_3673217_3673916_+	NA	NA|652aa|down_1|NZ_CP017920.1_3673951_3675907_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|52aa|down_2|NZ_CP017920.1_3675917_3676073_-	NA	NA|119aa|down_3|NZ_CP017920.1_3676172_3676529_-	NA	NA|542aa|down_4|NZ_CP017920.1_3676614_3678240_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|309aa|down_5|NZ_CP017920.1_3678241_3679168_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|288aa|down_6|NZ_CP017920.1_3679160_3680024_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|549aa|down_7|NZ_CP017920.1_3680020_3681667_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|257aa|down_8|NZ_CP017920.1_3681663_3682434_+	NA	NA|288aa|down_9|NZ_CP017920.1_3683188_3684052_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	15	3833942-3834527	5	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCGCCGGNGCCGCCNNTGC	19	6	66	3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834078-3834103|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834195-3834220|3834240-3834274|3834294-3834322|3834342-3834376|3834396-3834439	NZ_CP017920.1_2533190-2533215|NZ_CP017920.1_3038674-3038649|NZ_CP017920.1_416179-416154|NZ_CP017920.1_2699970-2699945|NZ_CP017920.1_949756-949731|NZ_CP017920.1_1515490-1515465|NZ_CP017920.1_1799490-1799465|NZ_CP017920.1_2534728-2534753|NZ_CP017920.1_2698278-2698253|NZ_CP017920.1_3835428-3835453|NZ_CP017920.1_3835473-3835498|NZ_CP017920.1_3839556-3839581|NZ_CP017920.1_3839628-3839653|NZ_CP017920.1_3840048-3840073|NZ_CP017920.1_4002319-4002344|NZ_CP017920.1_1741825-1741800|NZ_CP017920.1_1741834-1741809|NZ_CP017920.1_1800435-1800410|NZ_CP017920.1_3835338-3835363|NZ_CP017920.1_3835410-3835435|NZ_CP017920.1_3835419-3835444|NZ_CP017920.1_3835491-3835516|NZ_CP017920.1_3839398-3839423|NZ_CP017920.1_1883734-1883709|NZ_CP017920.1_2183729-2183704|NZ_CP017920.1_3835347-3835372|NZ_CP017920.1_3835428-3835453|NZ_CP017920.1_3835482-3835507|NZ_CP017920.1_3839628-3839653|NZ_CP017920.1_3839637-3839662|NZ_CP017920.1_3846135-3846160|NZ_CP017920.1_3846378-3846403|NZ_CP017920.1_3851435-3851460|NZ_CP017920.1_3851858-3851883|NZ_CP017920.1_1716288-1716263|NZ_CP017920.1_1740094-1740069|NZ_CP017920.1_1740103-1740078|NZ_CP017920.1_1741927-1741902|NZ_CP017920.1_1741936-1741911|NZ_CP017920.1_1800444-1800419|NZ_CP017920.1_1883872-1883847|NZ_CP017920.1_2183738-2183713|NZ_CP017920.1_2404487-2404462|NZ_CP017920.1_2532851-2532876|NZ_CP017920.1_2534728-2534753|NZ_CP017920.1_2534737-2534762|NZ_CP017920.1_2699574-2699549|NZ_CP017920.1_2699970-2699945|NZ_CP017920.1_2700771-2700746|NZ_CP017920.1_3036029-3036004|NZ_CP017920.1_3036248-3036223|NZ_CP017920.1_3835320-3835345|NZ_CP017920.1_3835329-3835354|NZ_CP017920.1_3835401-3835426|NZ_CP017920.1_3839389-3839414|NZ_CP017920.1_3839901-3839926|NZ_CP017920.1_3851426-3851451|NZ_CP017920.1_3851849-3851874|NZ_CP017920.1_3851945-3851970|NZ_CP017920.1_4002319-4002344|NZ_CP017920.1_4040728-4040703|NZ_CP017920.1_4044391-4044366|NZ_CP017920.1_3835455-3835489|NZ_CP017920.1_3835509-3835537|NZ_CP017920.1_3835557-3835591|NZ_CP017920.1_3835611-3835654	NA	10	10	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|280aa|up_2|NZ_CP017920.1_3829777_3830617_-,NA	NA|344aa|up_9|NZ_CP017920.1_3822261_3823293_-	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD	NA|395aa|up_8|NZ_CP017920.1_3823334_3824519_-	PRK08313, PRK08313, thiolase domain-containing protein	NA|355aa|up_7|NZ_CP017920.1_3824535_3825600_-	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|304aa|up_6|NZ_CP017920.1_3825615_3826527_-	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|348aa|up_5|NZ_CP017920.1_3826679_3827723_+	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|237aa|up_4|NZ_CP017920.1_3827787_3828498_-	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|399aa|up_3|NZ_CP017920.1_3828526_3829723_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|280aa|up_2|NZ_CP017920.1_3829777_3830617_-	NA	NA|264aa|up_1|NZ_CP017920.1_3830712_3831504_-	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|549aa|up_0|NZ_CP017920.1_3831577_3833224_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|219aa|down_0|NZ_CP017920.1_3838154_3838811_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|516aa|down_1|NZ_CP017920.1_3841580_3843128_+	PRK07586, PRK07586, acetolactate synthase large subunit	NA|1618aa|down_2|NZ_CP017920.1_3843294_3848148_-	pfam00934, PE, PE family	NA|1384aa|down_3|NZ_CP017920.1_3848438_3852590_-	pfam00934, PE, PE family	NA|503aa|down_4|NZ_CP017920.1_3852760_3854269_-	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|374aa|down_5|NZ_CP017920.1_3854339_3855461_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|401aa|down_6|NZ_CP017920.1_3855485_3856688_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|64aa|down_7|NZ_CP017920.1_3856902_3857094_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|318aa|down_8|NZ_CP017920.1_3857118_3858072_+	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|255aa|down_9|NZ_CP017920.1_3858297_3859062_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	16	3834614-3835204	6	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCGCCGGTGCCGCCGNNG	18	8	12	3834632-3834676|3834695-3834745|3834764-3834826|3834845-3834880|3834899-3834928|3834947-3834982|3835073-3835108|3835073-3835108|3835073-3835108|3835073-3835108|3835073-3835108|3835127-3835186	NZ_CP017920.1_3835241-3835285|NZ_CP017920.1_3835304-3835354|NZ_CP017920.1_3835373-3835435|NZ_CP017920.1_3835454-3835489|NZ_CP017920.1_3835508-3835537|NZ_CP017920.1_3835556-3835591|NZ_CP017920.1_3835682-3835717|NZ_CP017920.1_3836033-3836068|NZ_CP017920.1_3836192-3836227|NZ_CP017920.1_3836543-3836578|NZ_CP017920.1_3836855-3836890|NZ_CP017920.1_3834518-3834577	NA	9	9	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|280aa|up_2|NZ_CP017920.1_3829777_3830617_-,NA	NA|344aa|up_9|NZ_CP017920.1_3822261_3823293_-	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD	NA|395aa|up_8|NZ_CP017920.1_3823334_3824519_-	PRK08313, PRK08313, thiolase domain-containing protein	NA|355aa|up_7|NZ_CP017920.1_3824535_3825600_-	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|304aa|up_6|NZ_CP017920.1_3825615_3826527_-	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|348aa|up_5|NZ_CP017920.1_3826679_3827723_+	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|237aa|up_4|NZ_CP017920.1_3827787_3828498_-	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|399aa|up_3|NZ_CP017920.1_3828526_3829723_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|280aa|up_2|NZ_CP017920.1_3829777_3830617_-	NA	NA|264aa|up_1|NZ_CP017920.1_3830712_3831504_-	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|549aa|up_0|NZ_CP017920.1_3831577_3833224_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|219aa|down_0|NZ_CP017920.1_3838154_3838811_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|516aa|down_1|NZ_CP017920.1_3841580_3843128_+	PRK07586, PRK07586, acetolactate synthase large subunit	NA|1618aa|down_2|NZ_CP017920.1_3843294_3848148_-	pfam00934, PE, PE family	NA|1384aa|down_3|NZ_CP017920.1_3848438_3852590_-	pfam00934, PE, PE family	NA|503aa|down_4|NZ_CP017920.1_3852760_3854269_-	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|374aa|down_5|NZ_CP017920.1_3854339_3855461_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|401aa|down_6|NZ_CP017920.1_3855485_3856688_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|64aa|down_7|NZ_CP017920.1_3856902_3857094_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|318aa|down_8|NZ_CP017920.1_3857118_3858072_+	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|255aa|down_9|NZ_CP017920.1_3858297_3859062_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	17	3848476-3848900	7	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCGCCGGTGCCGCCGTTGCCGCC	23	1	1	3848856-3848877	NZ_CP017920.1_1754526-1754505	NA	7	7	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|280aa|up_5|NZ_CP017920.1_3829777_3830617_-,NA	NA|304aa|up_9|NZ_CP017920.1_3825615_3826527_-	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|348aa|up_8|NZ_CP017920.1_3826679_3827723_+	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|237aa|up_7|NZ_CP017920.1_3827787_3828498_-	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|399aa|up_6|NZ_CP017920.1_3828526_3829723_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|280aa|up_5|NZ_CP017920.1_3829777_3830617_-	NA	NA|264aa|up_4|NZ_CP017920.1_3830712_3831504_-	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|549aa|up_3|NZ_CP017920.1_3831577_3833224_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|219aa|up_2|NZ_CP017920.1_3838154_3838811_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|516aa|up_1|NZ_CP017920.1_3841580_3843128_+	PRK07586, PRK07586, acetolactate synthase large subunit	NA|1618aa|up_0|NZ_CP017920.1_3843294_3848148_-	pfam00934, PE, PE family	NA|503aa|down_0|NZ_CP017920.1_3852760_3854269_-	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|374aa|down_1|NZ_CP017920.1_3854339_3855461_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|401aa|down_2|NZ_CP017920.1_3855485_3856688_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|64aa|down_3|NZ_CP017920.1_3856902_3857094_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|318aa|down_4|NZ_CP017920.1_3857118_3858072_+	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|255aa|down_5|NZ_CP017920.1_3858297_3859062_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|281aa|down_6|NZ_CP017920.1_3859096_3859939_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|401aa|down_7|NZ_CP017920.1_3859958_3861161_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|351aa|down_8|NZ_CP017920.1_3861160_3862213_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|358aa|down_9|NZ_CP017920.1_3862202_3863276_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	18	3849656-3850335	8	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CGTTGCCGCCGTNGCCGCCGTTGCCNCCGTNNCCG	35	0	0	NA	NA	NA	7	7	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|280aa|up_5|NZ_CP017920.1_3829777_3830617_-,NA	NA|304aa|up_9|NZ_CP017920.1_3825615_3826527_-	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|348aa|up_8|NZ_CP017920.1_3826679_3827723_+	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|237aa|up_7|NZ_CP017920.1_3827787_3828498_-	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|399aa|up_6|NZ_CP017920.1_3828526_3829723_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|280aa|up_5|NZ_CP017920.1_3829777_3830617_-	NA	NA|264aa|up_4|NZ_CP017920.1_3830712_3831504_-	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|549aa|up_3|NZ_CP017920.1_3831577_3833224_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|219aa|up_2|NZ_CP017920.1_3838154_3838811_+	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|516aa|up_1|NZ_CP017920.1_3841580_3843128_+	PRK07586, PRK07586, acetolactate synthase large subunit	NA|1618aa|up_0|NZ_CP017920.1_3843294_3848148_-	pfam00934, PE, PE family	NA|503aa|down_0|NZ_CP017920.1_3852760_3854269_-	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|374aa|down_1|NZ_CP017920.1_3854339_3855461_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|401aa|down_2|NZ_CP017920.1_3855485_3856688_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|64aa|down_3|NZ_CP017920.1_3856902_3857094_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|318aa|down_4|NZ_CP017920.1_3857118_3858072_+	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|255aa|down_5|NZ_CP017920.1_3858297_3859062_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|281aa|down_6|NZ_CP017920.1_3859096_3859939_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|401aa|down_7|NZ_CP017920.1_3859958_3861161_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|351aa|down_8|NZ_CP017920.1_3861160_3862213_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|358aa|down_9|NZ_CP017920.1_3862202_3863276_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein
GCF_001870145.1_ASM187014v1	NZ_CP017920	Mycobacterium tuberculosis strain TB282 chromosome, complete genome	19	3978985-3980253	9	CRT	no		c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	Orphan	CCGCCGNCNCCGCCGNTGCCG	21	0	0	NA	NA	NA	20	20	Orphan	c2c9_V-U4,cas6,cas10,csm2gr11,csm3gr7,csa3,DEDDh,cas4,WYL,DinG,cas3	NA|237aa|up_7|NZ_CP017920.1_3969925_3970636_-,NA|205aa|up_6|NZ_CP017920.1_3970634_3971249_+,NA|297aa|down_5|NZ_CP017920.1_3989006_3989897_+	NA|303aa|up_9|NZ_CP017920.1_3967272_3968181_+	TIGR03465, HpnD, squalene synthase HpnD	NA|526aa|up_8|NZ_CP017920.1_3968192_3969770_+	PRK00074, guaA, GMP synthase; Reviewed	NA|237aa|up_7|NZ_CP017920.1_3969925_3970636_-	NA	NA|205aa|up_6|NZ_CP017920.1_3970634_3971249_+	NA	NA|528aa|up_5|NZ_CP017920.1_3971245_3972829_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|309aa|up_4|NZ_CP017920.1_3972883_3973810_-	cd02653, nuc_hydro_3, NH_3: A subgroup of nucleoside hydrolases	NA|288aa|up_3|NZ_CP017920.1_3973833_3974697_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|651aa|up_2|NZ_CP017920.1_3974697_3976650_-	PRK07201, PRK07201, SDR family oxidoreductase	NA|237aa|up_1|NZ_CP017920.1_3976695_3977406_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|291aa|up_0|NZ_CP017920.1_3977479_3978352_+	PLN02864, PLN02864, enoyl-CoA hydratase	NA|103aa|down_0|NZ_CP017920.1_3982309_3982618_+	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|131aa|down_1|NZ_CP017920.1_3982617_3983010_+	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|421aa|down_2|NZ_CP017920.1_3984470_3985732_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|330aa|down_3|NZ_CP017920.1_3986173_3987163_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|613aa|down_4|NZ_CP017920.1_3987159_3988998_+	PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|297aa|down_5|NZ_CP017920.1_3989006_3989897_+	NA	NA|502aa|down_6|NZ_CP017920.1_3989901_3991407_+	PLN02592, PLN02592, ent-copalyl diphosphate synthase	NA|218aa|down_7|NZ_CP017920.1_3991445_3992099_-	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|476aa|down_8|NZ_CP017920.1_3992206_3993634_-	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|83aa|down_9|NZ_CP017920.1_3993638_3993887_-	PRK06144, PRK06144, enoyl-CoA hydratase; Provisional
