assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001865855.1_ASM186585v1	NZ_CP017839	Nocardia seriolae strain EM150506 chromosome, complete genome	1	3840423-3840504	1	CRISPRCasFinder	no		WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	Orphan	GGATGGCCAGTGGCGGATCGCCT	23	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	NA,NA|124aa|down_8|NZ_CP017839.1_3853357_3853729_-	NA|195aa|up_9|NZ_CP017839.1_3825939_3826524_-	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]	NA|722aa|up_8|NZ_CP017839.1_3826825_3828991_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|161aa|up_7|NZ_CP017839.1_3829130_3829613_-	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|288aa|up_6|NZ_CP017839.1_3829669_3830533_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|151aa|up_5|NZ_CP017839.1_3831035_3831488_+	pfam00582, Usp, Universal stress protein family	NA|740aa|up_4|NZ_CP017839.1_3831601_3833821_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|444aa|up_3|NZ_CP017839.1_3834093_3835425_-	COG2199, COG2199, c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal    transduction mechanisms]	NA|382aa|up_2|NZ_CP017839.1_3835652_3836798_+	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II	NA|578aa|up_1|NZ_CP017839.1_3836806_3838540_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|216aa|up_0|NZ_CP017839.1_3838611_3839259_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|640aa|down_0|NZ_CP017839.1_3843560_3845480_-	PRK10522, PRK10522, multidrug transporter membrane component/ATP-binding component; Provisional	NA|415aa|down_1|NZ_CP017839.1_3845519_3846764_-	COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|514aa|down_2|NZ_CP017839.1_3846846_3848388_-	pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid binding domain	NA|378aa|down_3|NZ_CP017839.1_3848657_3849791_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|278aa|down_4|NZ_CP017839.1_3849971_3850805_-	pfam07161, LppX_LprAFG, LppX_LprAFG lipoprotein	NA|243aa|down_5|NZ_CP017839.1_3851015_3851744_-	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family	NA|279aa|down_6|NZ_CP017839.1_3851860_3852697_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|202aa|down_7|NZ_CP017839.1_3852703_3853309_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|124aa|down_8|NZ_CP017839.1_3853357_3853729_-	NA	NA|233aa|down_9|NZ_CP017839.1_3854074_3854773_+	PRK00028, infC, translation initiation factor IF-3; Reviewed
GCF_001865855.1_ASM186585v1	NZ_CP017839	Nocardia seriolae strain EM150506 chromosome, complete genome	2	6136924-6137038	2	CRISPRCasFinder	no		WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	Orphan	CCGACCGTGCACGCCTACAACCCGCAGG	28	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	NA|173aa|up_7|NZ_CP017839.1_6127887_6128406_+,NA|58aa|up_0|NZ_CP017839.1_6136435_6136609_+,NA|116aa|down_0|NZ_CP017839.1_6137938_6138286_+,NA|266aa|down_7|NZ_CP017839.1_6144287_6145085_-	NA|209aa|up_9|NZ_CP017839.1_6125727_6126354_+	pfam11452, DUF3000, Protein of unknown function (DUF3000)	NA|415aa|up_8|NZ_CP017839.1_6126520_6127765_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|173aa|up_7|NZ_CP017839.1_6127887_6128406_+	NA	NA|268aa|up_6|NZ_CP017839.1_6128556_6129360_-	PRK05864, PRK05864, enoyl-CoA hydratase; Provisional	NA|649aa|up_5|NZ_CP017839.1_6129479_6131426_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|612aa|up_4|NZ_CP017839.1_6131569_6133405_+	pfam04960, Glutaminase, Glutaminase	NA|309aa|up_3|NZ_CP017839.1_6133597_6134524_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|140aa|up_2|NZ_CP017839.1_6134617_6135037_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|378aa|up_1|NZ_CP017839.1_6135107_6136241_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|58aa|up_0|NZ_CP017839.1_6136435_6136609_+	NA	NA|116aa|down_0|NZ_CP017839.1_6137938_6138286_+	NA	NA|213aa|down_1|NZ_CP017839.1_6138290_6138929_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|191aa|down_2|NZ_CP017839.1_6138985_6139558_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|400aa|down_3|NZ_CP017839.1_6139557_6140757_+	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain	NA|248aa|down_4|NZ_CP017839.1_6140753_6141497_+	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|404aa|down_5|NZ_CP017839.1_6141501_6142713_-	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|209aa|down_6|NZ_CP017839.1_6142803_6143430_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|266aa|down_7|NZ_CP017839.1_6144287_6145085_-	NA	NA|663aa|down_8|NZ_CP017839.1_6147141_6149130_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|222aa|down_9|NZ_CP017839.1_6149535_6150201_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_001865855.1_ASM186585v1	NZ_CP017839	Nocardia seriolae strain EM150506 chromosome, complete genome	3	6943037-6943110	3	CRISPRCasFinder	no		WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	Orphan	GCGCCGGGTTGTGGTTGGGGCGC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	NA|305aa|up_8|NZ_CP017839.1_6935401_6936316_+,NA|278aa|up_7|NZ_CP017839.1_6936591_6937425_+,NA|79aa|up_3|NZ_CP017839.1_6939817_6940054_+,NA|59aa|up_0|NZ_CP017839.1_6941565_6941742_+,NA|260aa|down_2|NZ_CP017839.1_6946366_6947146_+,NA|139aa|down_8|NZ_CP017839.1_6953780_6954197_+,NA|179aa|down_9|NZ_CP017839.1_6954223_6954760_+	NA|596aa|up_9|NZ_CP017839.1_6933585_6935373_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|305aa|up_8|NZ_CP017839.1_6935401_6936316_+	NA	NA|278aa|up_7|NZ_CP017839.1_6936591_6937425_+	NA	NA|344aa|up_6|NZ_CP017839.1_6937502_6938534_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|194aa|up_5|NZ_CP017839.1_6938600_6939182_-	pfam11706, zf-CGNR, CGNR zinc finger	NA|165aa|up_4|NZ_CP017839.1_6939269_6939764_+	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme	NA|79aa|up_3|NZ_CP017839.1_6939817_6940054_+	NA	NA|66aa|up_2|NZ_CP017839.1_6940108_6940306_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|294aa|up_1|NZ_CP017839.1_6940302_6941184_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|59aa|up_0|NZ_CP017839.1_6941565_6941742_+	NA	NA|220aa|down_0|NZ_CP017839.1_6944236_6944896_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|383aa|down_1|NZ_CP017839.1_6945002_6946151_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|260aa|down_2|NZ_CP017839.1_6946366_6947146_+	NA	NA|447aa|down_3|NZ_CP017839.1_6947373_6948714_+	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|664aa|down_4|NZ_CP017839.1_6948674_6950666_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|490aa|down_5|NZ_CP017839.1_6950851_6952321_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|100aa|down_6|NZ_CP017839.1_6952317_6952617_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|217aa|down_7|NZ_CP017839.1_6952860_6953511_+	cd04887, ACT_MalLac-Enz, ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains	NA|139aa|down_8|NZ_CP017839.1_6953780_6954197_+	NA	NA|179aa|down_9|NZ_CP017839.1_6954223_6954760_+	NA
GCF_001865855.1_ASM186585v1	NZ_CP017839	Nocardia seriolae strain EM150506 chromosome, complete genome	4	7057116-7057216	4	CRISPRCasFinder	no		WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	Orphan	ACGGTCGGGGCGGGCGCGACCGA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,PrimPol,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG	NA|86aa|up_3|NZ_CP017839.1_7052233_7052491_-,NA|105aa|up_2|NZ_CP017839.1_7052540_7052855_-,NA	NA|521aa|up_9|NZ_CP017839.1_7045277_7046840_-	pfam00743, FMO-like, Flavin-binding monooxygenase-like	NA|332aa|up_8|NZ_CP017839.1_7046990_7047986_-	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter	NA|270aa|up_7|NZ_CP017839.1_7047982_7048792_-	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]	NA|292aa|up_6|NZ_CP017839.1_7048791_7049667_-	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT	NA|346aa|up_5|NZ_CP017839.1_7049729_7050767_-	cd01005, PBP2_CysP, Substrate binding domain of an active sulfate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|348aa|up_4|NZ_CP017839.1_7051193_7052237_+	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase	NA|86aa|up_3|NZ_CP017839.1_7052233_7052491_-	NA	NA|105aa|up_2|NZ_CP017839.1_7052540_7052855_-	NA	NA|645aa|up_1|NZ_CP017839.1_7053057_7054992_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|594aa|up_0|NZ_CP017839.1_7055066_7056848_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|616aa|down_0|NZ_CP017839.1_7059501_7061349_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|194aa|down_1|NZ_CP017839.1_7061505_7062087_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|260aa|down_2|NZ_CP017839.1_7062083_7062863_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|277aa|down_3|NZ_CP017839.1_7062904_7063735_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|325aa|down_4|NZ_CP017839.1_7063817_7064792_-	COG2307, COG2307, Uncharacterized protein conserved in bacteria [Function unknown]	NA|527aa|down_5|NZ_CP017839.1_7064856_7066437_-	COG2308, COG2308, Uncharacterized conserved protein [Function unknown]	NA|88aa|down_6|NZ_CP017839.1_7066731_7066995_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|248aa|down_7|NZ_CP017839.1_7067310_7068054_+	COG5479, COG5479, Uncharacterized protein potentially involved in peptidoglycan biosynthesis [Cell envelope biogenesis, outer membrane]	NA|325aa|down_8|NZ_CP017839.1_7068069_7069044_-	PRK07914, PRK07914, hypothetical protein; Reviewed	NA|386aa|down_9|NZ_CP017839.1_7069170_7070328_+	pfam00144, Beta-lactamase, Beta-lactamase
