assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	1	316988-317091	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	AAACCGCTGGTCAGAAAATCACGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|123aa|up_6|NZ_CP009360.2_310443_310812_-,NA|116aa|up_5|NZ_CP009360.2_310898_311246_+,NA|80aa|up_1|NZ_CP009360.2_315116_315356_+,NA|107aa|up_0|NZ_CP009360.2_315514_315835_+,NA|92aa|down_0|NZ_CP009360.2_317176_317452_+,NA|107aa|down_1|NZ_CP009360.2_317718_318039_+,NA|65aa|down_2|NZ_CP009360.2_318440_318635_+,NA|92aa|down_4|NZ_CP009360.2_319522_319798_+,NA|147aa|down_5|NZ_CP009360.2_319800_320241_+,NA|61aa|down_7|NZ_CP009360.2_320650_320833_+,NA|170aa|down_9|NZ_CP009360.2_321469_321979_-	NA|162aa|up_9|NZ_CP009360.2_307626_308112_+	COG4119, COG4119, Predicted NTP pyrophosphohydrolase [DNA replication, recombination, and repair / General function prediction only]	NA|302aa|up_8|NZ_CP009360.2_308113_309019_+	PRK00870, PRK00870, haloalkane dehalogenase; Provisional	NA|412aa|up_7|NZ_CP009360.2_309055_310291_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|123aa|up_6|NZ_CP009360.2_310443_310812_-	NA	NA|116aa|up_5|NZ_CP009360.2_310898_311246_+	NA	NA|370aa|up_4|NZ_CP009360.2_311212_312322_-	PRK08224, ligC, ATP-dependent DNA ligase; Reviewed	NA|346aa|up_3|NZ_CP009360.2_312348_313386_+	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|301aa|up_2|NZ_CP009360.2_313435_314338_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|80aa|up_1|NZ_CP009360.2_315116_315356_+	NA	NA|107aa|up_0|NZ_CP009360.2_315514_315835_+	NA	NA|92aa|down_0|NZ_CP009360.2_317176_317452_+	NA	NA|107aa|down_1|NZ_CP009360.2_317718_318039_+	NA	NA|65aa|down_2|NZ_CP009360.2_318440_318635_+	NA	NA|149aa|down_3|NZ_CP009360.2_318621_319068_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|92aa|down_4|NZ_CP009360.2_319522_319798_+	NA	NA|147aa|down_5|NZ_CP009360.2_319800_320241_+	NA	NA|91aa|down_6|NZ_CP009360.2_320371_320644_+	cd01022, GH57N_like, N-terminal catalytic domain of heat stable retaining glycoside hydrolase family 57	NA|61aa|down_7|NZ_CP009360.2_320650_320833_+	NA	NA|68aa|down_8|NZ_CP009360.2_321066_321270_-	smart01040, Bro-N, BRO family, N-terminal domain	NA|170aa|down_9|NZ_CP009360.2_321469_321979_-	NA
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	2	349248-349327	2	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,DinG,cas4,WYL	Unclear	TGGCGGGCCTGCATCGTCGTCGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|379aa|up_8|NZ_CP009360.2_339548_340685_-,NA|443aa|up_7|NZ_CP009360.2_340681_342010_-,NA|113aa|up_6|NZ_CP009360.2_342054_342393_+,NA|563aa|up_4|NZ_CP009360.2_343774_345463_-,NA|126aa|up_2|NZ_CP009360.2_346195_346573_+,NA	NA|356aa|up_9|NZ_CP009360.2_338442_339510_-	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|379aa|up_8|NZ_CP009360.2_339548_340685_-	NA	NA|443aa|up_7|NZ_CP009360.2_340681_342010_-	NA	NA|113aa|up_6|NZ_CP009360.2_342054_342393_+	NA	NA|461aa|up_5|NZ_CP009360.2_342395_343778_-	pfam12770, CHAT, CHAT domain	NA|563aa|up_4|NZ_CP009360.2_343774_345463_-	NA	NA|164aa|up_3|NZ_CP009360.2_345560_346052_-	pfam05481, Myco_19_kDa, Mycobacterium 19 kDa lipoprotein antigen	NA|126aa|up_2|NZ_CP009360.2_346195_346573_+	NA	NA|275aa|up_1|NZ_CP009360.2_346569_347394_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|428aa|up_0|NZ_CP009360.2_347861_349145_+	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase	NA|609aa|down_0|NZ_CP009360.2_349350_351177_+	PRK14952, PRK14952, DNA polymerase III subunits gamma/tau	NA|421aa|down_1|NZ_CP009360.2_351188_352451_-	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|475aa|down_2|NZ_CP009360.2_352495_353920_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|146aa|down_3|NZ_CP009360.2_353968_354406_+	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|246aa|down_4|NZ_CP009360.2_354402_355140_-	COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|117aa|down_5|NZ_CP009360.2_355274_355625_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|204aa|down_6|NZ_CP009360.2_355650_356262_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|236aa|down_7|NZ_CP009360.2_356276_356984_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|417aa|down_8|NZ_CP009360.2_356976_358227_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	DEDDh|330aa|down_9|NZ_CP009360.2_358475_359465_+	PRK06063, PRK06063, DEDDh family exonuclease
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	3	1171959-1172202	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	GCGGCGGGTGCCGGAGCGGACGGCG	25	0	0	NA	NA	NA	4	4	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|41aa|up_9|NZ_CP009360.2_1164557_1164680_-,NA|49aa|up_0|NZ_CP009360.2_1171318_1171465_+,NA	NA|41aa|up_9|NZ_CP009360.2_1164557_1164680_-	NA	NA|781aa|up_8|NZ_CP009360.2_1164992_1167335_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|212aa|up_7|NZ_CP009360.2_1167417_1168053_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|238aa|up_6|NZ_CP009360.2_1168060_1168774_-	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional	NA|122aa|up_5|NZ_CP009360.2_1168811_1169177_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|200aa|up_4|NZ_CP009360.2_1169228_1169828_-	COG3797, COG3797, Uncharacterized protein conserved in bacteria [Function unknown]	NA|148aa|up_3|NZ_CP009360.2_1169826_1170270_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|75aa|up_2|NZ_CP009360.2_1170328_1170553_+	pfam17227, DUF5302, Family of unknown function (DUF5302)	NA|192aa|up_1|NZ_CP009360.2_1170714_1171290_+	TIGR03252, TIGR03252, uncharacterized HhH-GPD family protein	NA|49aa|up_0|NZ_CP009360.2_1171318_1171465_+	NA	NA|197aa|down_0|NZ_CP009360.2_1172685_1173276_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|438aa|down_1|NZ_CP009360.2_1173521_1174835_+	PRK13375, pimE, mannosyltransferase; Provisional	NA|95aa|down_2|NZ_CP009360.2_1174907_1175192_-	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|258aa|down_3|NZ_CP009360.2_1175321_1176095_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|131aa|down_4|NZ_CP009360.2_1176264_1176657_+	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|1231aa|down_5|NZ_CP009360.2_1177075_1180768_+	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion]	NA|539aa|down_6|NZ_CP009360.2_1180769_1182386_+	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|228aa|down_7|NZ_CP009360.2_1182382_1183066_+	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion]	NA|244aa|down_8|NZ_CP009360.2_1183058_1183790_+	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|633aa|down_9|NZ_CP009360.2_1183952_1185851_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	4	1213788-1213865	4	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	TGGCCGCCGGCGCGGCGGCCGCCA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|82aa|up_7|NZ_CP009360.2_1204818_1205064_-,NA	NA|795aa|up_9|NZ_CP009360.2_1195803_1198188_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|2121aa|up_8|NZ_CP009360.2_1198459_1204822_+	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|82aa|up_7|NZ_CP009360.2_1204818_1205064_-	NA	NA|68aa|up_6|NZ_CP009360.2_1205219_1205423_+	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB	NA|351aa|up_5|NZ_CP009360.2_1205419_1206472_-	pfam00823, PPE, PPE family	NA|396aa|up_4|NZ_CP009360.2_1206546_1207734_-	pfam00823, PPE, PPE family	NA|231aa|up_3|NZ_CP009360.2_1208545_1209238_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|420aa|up_2|NZ_CP009360.2_1209234_1210494_+	PRK04149, sat, sulfate adenylyltransferase; Reviewed	NA|111aa|up_1|NZ_CP009360.2_1210490_1210823_+	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|580aa|up_0|NZ_CP009360.2_1210833_1212573_-	PRK05850, PRK05850, acyl-CoA synthetase; Validated	NA|531aa|down_0|NZ_CP009360.2_1214705_1216298_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|547aa|down_1|NZ_CP009360.2_1216382_1218023_+	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1	NA|321aa|down_2|NZ_CP009360.2_1218022_1218985_+	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|201aa|down_3|NZ_CP009360.2_1219077_1219680_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|390aa|down_4|NZ_CP009360.2_1219700_1220870_-	PRK07855, PRK07855, lipid-transfer protein; Provisional	NA|154aa|down_5|NZ_CP009360.2_1220866_1221328_-	cd03455, SAV4209, SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|374aa|down_6|NZ_CP009360.2_1221324_1222446_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|135aa|down_7|NZ_CP009360.2_1222453_1222858_-	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|182aa|down_8|NZ_CP009360.2_1222857_1223403_-	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase	NA|399aa|down_9|NZ_CP009360.2_1224610_1225807_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	5	1371180-1371255	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	GCAGGAGGAGCGGCGCTGATGTCT	24	1	1	1371204-1371231	NZ_CP009360.2_3164309-3164336	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|114aa|up_9|NZ_CP009360.2_1359435_1359777_-,NA|102aa|up_3|NZ_CP009360.2_1366614_1366920_+,NA	NA|114aa|up_9|NZ_CP009360.2_1359435_1359777_-	NA	NA|551aa|up_8|NZ_CP009360.2_1360192_1361845_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|473aa|up_7|NZ_CP009360.2_1361841_1363260_+	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|442aa|up_6|NZ_CP009360.2_1363263_1364589_+	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|361aa|up_5|NZ_CP009360.2_1364585_1365668_+	PRK07409, PRK07409, threonine synthase; Validated	NA|316aa|up_4|NZ_CP009360.2_1365697_1366645_+	COG0083, ThrB, Homoserine kinase [Amino acid transport and metabolism]	NA|102aa|up_3|NZ_CP009360.2_1366614_1366920_+	NA	NA|621aa|up_2|NZ_CP009360.2_1366912_1368775_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|81aa|up_1|NZ_CP009360.2_1368876_1369119_+	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|358aa|up_0|NZ_CP009360.2_1369215_1370289_+	PRK00591, prfA, peptide chain release factor 1; Validated	NA|408aa|down_0|NZ_CP009360.2_1371935_1373159_+	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|161aa|down_1|NZ_CP009360.2_1373374_1373857_+	pfam03899, ATP-synt_I, ATP synthase I chain	NA|253aa|down_2|NZ_CP009360.2_1373849_1374608_+	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|83aa|down_3|NZ_CP009360.2_1374692_1374941_+	PRK05880, PRK05880, F0F1 ATP synthase subunit C; Validated	NA|178aa|down_4|NZ_CP009360.2_1374950_1375484_+	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|447aa|down_5|NZ_CP009360.2_1375491_1376832_+	PRK13428, PRK13428, F0F1 ATP synthase subunit delta; Provisional	NA|555aa|down_6|NZ_CP009360.2_1376899_1378564_+	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|305aa|down_7|NZ_CP009360.2_1378570_1379485_+	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|486aa|down_8|NZ_CP009360.2_1379513_1380971_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|122aa|down_9|NZ_CP009360.2_1381010_1381376_+	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	6	2948271-2948401	6	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	TTCCGGCTCGCCCGCCTCTTCGGCCGCTTCCGTTTCTTCGGATTCCGGCT	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA,NA	NA|444aa|up_9|NZ_CP009360.2_2935657_2936989_+	smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain	NA|198aa|up_8|NZ_CP009360.2_2937016_2937610_+	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|491aa|up_7|NZ_CP009360.2_2937696_2939169_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|347aa|up_6|NZ_CP009360.2_2939202_2940243_+	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|541aa|up_5|NZ_CP009360.2_2940305_2941928_+	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|545aa|up_4|NZ_CP009360.2_2941962_2943597_+	TIGR02868, ABC_transporter_ATP-binding_protein, thiol reductant ABC exporter, CydC subunit	NA|466aa|up_3|NZ_CP009360.2_2943603_2945001_-	COG2898, COG2898, Uncharacterized conserved protein [Function unknown]	NA|301aa|up_2|NZ_CP009360.2_2945142_2946045_-	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|473aa|up_1|NZ_CP009360.2_2946117_2947536_-	PRK06247, PRK06247, pyruvate kinase; Provisional	NA|118aa|up_0|NZ_CP009360.2_2947602_2947956_-	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|272aa|down_0|NZ_CP009360.2_2949424_2950240_-	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|424aa|down_1|NZ_CP009360.2_2950236_2951508_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|273aa|down_2|NZ_CP009360.2_2951579_2952398_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|227aa|down_3|NZ_CP009360.2_2952511_2953192_-	TIGR02234, conserved_hypothetical_protein, trp region conserved hypothetical membrane protein	NA|511aa|down_4|NZ_CP009360.2_2953188_2954721_-	PRK13571, PRK13571, anthranilate synthase component I; Provisional	NA|153aa|down_5|NZ_CP009360.2_2954894_2955353_+	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides	NA|369aa|down_6|NZ_CP009360.2_2955356_2956463_-	COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism]	NA|116aa|down_7|NZ_CP009360.2_2956565_2956913_-	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed	NA|266aa|down_8|NZ_CP009360.2_2956909_2957707_-	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|267aa|down_9|NZ_CP009360.2_2957708_2958509_-	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	7	3207276-3207366	7	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	CCTACCCCGCTTCGCGGCGCAGCGCGGACGCG	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA,NA	NA|489aa|up_9|NZ_CP009360.2_3198195_3199662_+	pfam00823, PPE, PPE family	NA|113aa|up_8|NZ_CP009360.2_3199765_3200104_+	TIGR04529, hypothetical_protein, hemophore-related protein, Rv0203/Rv1174c family	NA|155aa|up_7|NZ_CP009360.2_3200137_3200602_-	pfam10756, bPH_6, Bacterial PH domain	NA|161aa|up_6|NZ_CP009360.2_3200598_3201081_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|426aa|up_5|NZ_CP009360.2_3201130_3202408_-	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|200aa|up_4|NZ_CP009360.2_3202529_3203129_-	PRK09289, PRK09289, riboflavin synthase	NA|236aa|up_3|NZ_CP009360.2_3203247_3203955_+	pfam07161, LppX_LprAFG, LppX_LprAFG lipoprotein	NA|519aa|up_2|NZ_CP009360.2_3203951_3205508_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|342aa|up_1|NZ_CP009360.2_3205504_3206530_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|236aa|up_0|NZ_CP009360.2_3206526_3207234_-	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|316aa|down_0|NZ_CP009360.2_3208726_3209674_-	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed	NA|276aa|down_1|NZ_CP009360.2_3209817_3210645_+	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|162aa|down_2|NZ_CP009360.2_3210650_3211136_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|656aa|down_3|NZ_CP009360.2_3211263_3213231_-	PRK14873, PRK14873, primosomal protein N'	NA|264aa|down_4|NZ_CP009360.2_3213315_3214107_-	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|321aa|down_5|NZ_CP009360.2_3214105_3215068_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|497aa|down_6|NZ_CP009360.2_3215113_3216604_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|404aa|down_7|NZ_CP009360.2_3216768_3217980_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|421aa|down_8|NZ_CP009360.2_3218076_3219339_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|109aa|down_9|NZ_CP009360.2_3219360_3219687_-	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	8	3452559-3452649	8	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	GCCCGGCGACGATGCGCGCCGCCGCGCGGCGCG	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA,NA|109aa|down_6|NZ_CP009360.2_3458968_3459295_+	NA|109aa|up_9|NZ_CP009360.2_3442598_3442925_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|191aa|up_8|NZ_CP009360.2_3443054_3443627_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|181aa|up_7|NZ_CP009360.2_3443692_3444235_+	PRK07922, PRK07922, amino-acid N-acetyltransferase	NA|775aa|up_6|NZ_CP009360.2_3444327_3446652_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|105aa|up_5|NZ_CP009360.2_3447018_3447333_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|277aa|up_4|NZ_CP009360.2_3447332_3448163_+	TIGR03971, short-chain_dehydrogenase/reductase_SDR, SDR family mycofactocin-dependent oxidoreductase	NA|291aa|up_3|NZ_CP009360.2_3448168_3449041_+	TIGR00027, Hypothetical_protein_Rv0893c/MT0917/Mb0917c	NA|559aa|up_2|NZ_CP009360.2_3449149_3450826_-	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|301aa|up_1|NZ_CP009360.2_3450845_3451748_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|251aa|up_0|NZ_CP009360.2_3451791_3452544_-	PRK00847, thyX, FAD-dependent thymidylate synthase; Reviewed	NA|245aa|down_0|NZ_CP009360.2_3453888_3454623_-	pfam05103, DivIVA, DivIVA protein	NA|182aa|down_1|NZ_CP009360.2_3454692_3455238_-	pfam00186, DHFR_1, Dihydrofolate reductase	NA|267aa|down_2|NZ_CP009360.2_3455234_3456035_-	PRK01827, thyA, thymidylate synthase; Reviewed	NA|247aa|down_3|NZ_CP009360.2_3456077_3456818_+	pfam01738, DLH, Dienelactone hydrolase family	NA|401aa|down_4|NZ_CP009360.2_3456806_3458009_-	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins	NA|260aa|down_5|NZ_CP009360.2_3458069_3458849_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|109aa|down_6|NZ_CP009360.2_3458968_3459295_+	NA	NA|1076aa|down_7|NZ_CP009360.2_3459307_3462535_-	PRK12999, PRK12999, pyruvate carboxylase; Reviewed	NA|508aa|down_8|NZ_CP009360.2_3462531_3464055_-	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13	NA|278aa|down_9|NZ_CP009360.2_3464118_3464952_+	pfam13622, 4HBT_3, Thioesterase-like superfamily
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	9	4600792-4600936	9	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	CGCATCGTCGCCGGGCCTAAGCTGG	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA,NA|61aa|down_5|NZ_CP009360.2_4604867_4605050_+	NA|228aa|up_9|NZ_CP009360.2_4590638_4591322_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|410aa|up_8|NZ_CP009360.2_4591371_4592601_-	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|250aa|up_7|NZ_CP009360.2_4592765_4593515_-	PRK14120, gpmA, phosphoglyceromutase; Provisional	NA|170aa|up_6|NZ_CP009360.2_4593566_4594076_-	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|425aa|up_5|NZ_CP009360.2_4594072_4595347_-	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase	NA|445aa|up_4|NZ_CP009360.2_4595410_4596745_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|250aa|up_3|NZ_CP009360.2_4596923_4597673_+	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|447aa|up_2|NZ_CP009360.2_4597656_4598997_-	pfam17964, Big_10, Bacterial Ig domain	NA|373aa|up_1|NZ_CP009360.2_4599069_4600188_-	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase	NA|175aa|up_0|NZ_CP009360.2_4600214_4600739_+	pfam10698, DUF2505, Protein of unknown function (DUF2505)	NA|353aa|down_0|NZ_CP009360.2_4601702_4602761_+	pfam11209, DUF2993, Protein of unknown function (DUF2993)	NA|224aa|down_1|NZ_CP009360.2_4602773_4603445_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|142aa|down_2|NZ_CP009360.2_4603441_4603867_-	pfam10783, DUF2599, Protein of unknown function (DUF2599)	NA|88aa|down_3|NZ_CP009360.2_4603871_4604135_-	pfam10724, DUF2516, Protein of unknown function (DUF2516)	NA|206aa|down_4|NZ_CP009360.2_4604247_4604865_-	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|61aa|down_5|NZ_CP009360.2_4604867_4605050_+	NA	NA|139aa|down_6|NZ_CP009360.2_4605069_4605486_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|437aa|down_7|NZ_CP009360.2_4605569_4606880_-	COG2733, COG2733, Predicted membrane protein [Function unknown]	NA|236aa|down_8|NZ_CP009360.2_4607015_4607723_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|289aa|down_9|NZ_CP009360.2_4607858_4608725_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase
GCF_001865635.2_ASM186563v2	NZ_CP009360	Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, complete genome	10	4961345-4961421	10	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	GCGCGCCCATGGCGCTCGTCGCG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|185aa|up_3|NZ_CP009360.2_4956459_4957014_-,NA|234aa|up_1|NZ_CP009360.2_4957978_4958680_-,NA	NA|297aa|up_9|NZ_CP009360.2_4950701_4951592_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|242aa|up_8|NZ_CP009360.2_4951617_4952343_+	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|475aa|up_7|NZ_CP009360.2_4952401_4953826_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|370aa|up_6|NZ_CP009360.2_4953905_4955015_+	pfam09992, NAGPA, Phosphodiester glycosidase	NA|222aa|up_5|NZ_CP009360.2_4955007_4955673_-	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|252aa|up_4|NZ_CP009360.2_4955737_4956493_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|185aa|up_3|NZ_CP009360.2_4956459_4957014_-	NA	NA|324aa|up_2|NZ_CP009360.2_4957010_4957982_-	pfam06271, RDD, RDD family	NA|234aa|up_1|NZ_CP009360.2_4957978_4958680_-	NA	NA|517aa|up_0|NZ_CP009360.2_4958649_4960200_-	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|538aa|down_0|NZ_CP009360.2_4961425_4963039_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|522aa|down_1|NZ_CP009360.2_4963035_4964601_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|347aa|down_2|NZ_CP009360.2_4964597_4965638_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|435aa|down_3|NZ_CP009360.2_4965634_4966939_-	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|290aa|down_4|NZ_CP009360.2_4966944_4967814_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|down_5|NZ_CP009360.2_4967815_4968631_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|529aa|down_6|NZ_CP009360.2_4968930_4970517_-	PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated	NA|147aa|down_7|NZ_CP009360.2_4971386_4971827_-	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|162aa|down_8|NZ_CP009360.2_4971870_4972356_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|371aa|down_9|NZ_CP009360.2_4972370_4973483_+	cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)
GCF_001865635.2_ASM186563v2	NZ_CP009406	Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p18K, complete sequence	1	16364-16450	1	CRISPRCasFinder	no			Orphan	GTTCAGCTCGTCCCACACCCGACC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|89aa|up_9|NZ_CP009406.1_9291_9558_-,NA|74aa|up_8|NZ_CP009406.1_9593_9815_-,NA|68aa|up_7|NZ_CP009406.1_9987_10191_+,NA|79aa|up_5|NZ_CP009406.1_10997_11234_+,NA|67aa|up_4|NZ_CP009406.1_11721_11922_+,NA|75aa|up_3|NZ_CP009406.1_12750_12975_+,NA|74aa|up_1|NZ_CP009406.1_14121_14343_+,NA|224aa|up_0|NZ_CP009406.1_14549_15221_-,NA|72aa|down_0|NZ_CP009406.1_16953_17169_-,NA|160aa|down_1|NZ_CP009406.1_17347_17827_+,NA|70aa|down_2|NZ_CP009406.1_17898_18108_+	NA|89aa|up_9|NZ_CP009406.1_9291_9558_-	NA	NA|74aa|up_8|NZ_CP009406.1_9593_9815_-	NA	NA|68aa|up_7|NZ_CP009406.1_9987_10191_+	NA	NA|201aa|up_6|NZ_CP009406.1_10201_10804_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|79aa|up_5|NZ_CP009406.1_10997_11234_+	NA	NA|67aa|up_4|NZ_CP009406.1_11721_11922_+	NA	NA|75aa|up_3|NZ_CP009406.1_12750_12975_+	NA	NA|240aa|up_2|NZ_CP009406.1_13208_13928_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|74aa|up_1|NZ_CP009406.1_14121_14343_+	NA	NA|224aa|up_0|NZ_CP009406.1_14549_15221_-	NA	NA|72aa|down_0|NZ_CP009406.1_16953_17169_-	NA	NA|160aa|down_1|NZ_CP009406.1_17347_17827_+	NA	NA|70aa|down_2|NZ_CP009406.1_17898_18108_+	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
