assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001865535.1_ASM186553v1	NZ_CP017875	Campylobacter coli strain ZV1224 chromosome, complete genome	1	398951-399514	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	WYL,csa3,cas9,cas1,cas2,cas14j,DEDDh	Type II-A, or Type II-C?,Type II-B,Type II-C, Type II-B	ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC	36,36,36	1	1	399119-399148	NZ_CP017875.1_59363-59334	NA:NA:NA	7,8,8	8	TypeII-A,TypeII-B,orTypeII-C?,TypeII-C,TypeII-B	WYL,csa3,cas9,cas1,cas2,cas14j,DEDDh,c2c9_V-U4	NA,NA	NA|150aa|up_9|NZ_CP017875.1_387337_387787_+	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|346aa|up_8|NZ_CP017875.1_388707_389745_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|244aa|up_7|NZ_CP017875.1_389751_390483_-	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|250aa|up_6|NZ_CP017875.1_390457_391207_-	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|202aa|up_5|NZ_CP017875.1_391203_391809_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|330aa|up_4|NZ_CP017875.1_391869_392859_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|485aa|up_3|NZ_CP017875.1_392878_394333_-	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	cas9|985aa|up_2|NZ_CP017875.1_394539_397494_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|297aa|up_1|NZ_CP017875.1_397490_398381_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|144aa|up_0|NZ_CP017875.1_398373_398805_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|397aa|down_0|NZ_CP017875.1_399627_400818_-	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	NA|149aa|down_1|NZ_CP017875.1_400821_401268_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|74aa|down_2|NZ_CP017875.1_401268_401490_-	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|514aa|down_3|NZ_CP017875.1_401491_403033_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|383aa|down_4|NZ_CP017875.1_403156_404305_+	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|234aa|down_5|NZ_CP017875.1_404636_405338_+	pfam02613, Nitrate_red_del, Nitrate reductase delta subunit	NA|66aa|down_6|NZ_CP017875.1_405312_405510_+	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|181aa|down_7|NZ_CP017875.1_405509_406052_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|738aa|down_8|NZ_CP017875.1_406100_408314_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|214aa|down_9|NZ_CP017875.1_408317_408959_+	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family
GCF_001865535.1_ASM186553v1	NZ_CP017875	Campylobacter coli strain ZV1224 chromosome, complete genome	2	1763477-1764040	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	WYL,csa3,cas9,cas1,cas2,cas14j,DEDDh	Type II-A, or Type II-C?,Type II-B,Type II-C, Type II-B	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC	36,36,36	1	1	1763843-1763872	NZ_CP017875.1_59334-59363	NA:NA:NA	8,8,7	8	TypeII-A,TypeII-B,orTypeII-C?,TypeII-C,TypeII-B	WYL,csa3,cas9,cas1,cas2,cas14j,DEDDh,c2c9_V-U4	NA,NA	NA|311aa|up_9|NZ_CP017875.1_1753102_1754035_-	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit	NA|214aa|up_8|NZ_CP017875.1_1754031_1754673_-	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|935aa|up_7|NZ_CP017875.1_1754676_1757481_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|66aa|up_6|NZ_CP017875.1_1757480_1757678_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|234aa|up_5|NZ_CP017875.1_1757652_1758354_-	pfam02613, Nitrate_red_del, Nitrate reductase delta subunit	NA|383aa|up_4|NZ_CP017875.1_1758685_1759834_-	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|514aa|up_3|NZ_CP017875.1_1759957_1761499_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|74aa|up_2|NZ_CP017875.1_1761500_1761722_+	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|149aa|up_1|NZ_CP017875.1_1761722_1762169_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|397aa|up_0|NZ_CP017875.1_1762172_1763363_+	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	cas2|144aa|down_0|NZ_CP017875.1_1764185_1764617_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|297aa|down_1|NZ_CP017875.1_1764609_1765500_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|985aa|down_2|NZ_CP017875.1_1765496_1768451_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|485aa|down_3|NZ_CP017875.1_1768657_1770112_+	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	NA|330aa|down_4|NZ_CP017875.1_1770131_1771121_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|202aa|down_5|NZ_CP017875.1_1771181_1771787_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|250aa|down_6|NZ_CP017875.1_1771783_1772533_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|244aa|down_7|NZ_CP017875.1_1772507_1773239_+	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|346aa|down_8|NZ_CP017875.1_1773245_1774283_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|150aa|down_9|NZ_CP017875.1_1775203_1775653_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]
GCF_001865535.1_ASM186553v1	NZ_CP017877	Campylobacter coli strain ZV1224 plasmid pCCDM224L, complete sequence	1	46770-46976	1	PILER-CR	no			Orphan	TAAATAAAAAATTGACATAAATAGAATAGTTT	32	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,cas9,cas1,cas2,cas14j,DEDDh,c2c9_V-U4	NA|108aa|up_8|NZ_CP017877.1_38215_38539_+,NA|88aa|down_2|NZ_CP017877.1_49199_49463_-,NA|220aa|down_4|NZ_CP017877.1_50881_51541_-,NA|204aa|down_5|NZ_CP017877.1_51544_52156_-,NA|184aa|down_7|NZ_CP017877.1_52660_53212_+	NA|88aa|up_9|NZ_CP017877.1_37782_38046_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|108aa|up_8|NZ_CP017877.1_38215_38539_+	NA	NA|126aa|up_7|NZ_CP017877.1_38529_38907_+	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown]	NA|205aa|up_6|NZ_CP017877.1_38903_39518_+	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|733aa|up_5|NZ_CP017877.1_39770_41969_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|355aa|up_4|NZ_CP017877.1_41910_42975_+	cd17586, REC_PFxFATGY, phosphoacceptor receiver (REC) domain of PFxFATGY motif single-domain (stand-alone) response regulators	NA|419aa|up_3|NZ_CP017877.1_42967_44224_-	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|598aa|up_2|NZ_CP017877.1_44375_46169_-	pfam13481, AAA_25, AAA domain	NA|68aa|up_1|NZ_CP017877.1_46171_46375_-	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family    [General function prediction only]	NA|73aa|up_0|NZ_CP017877.1_46367_46586_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|238aa|down_0|NZ_CP017877.1_47412_48126_-	pfam14491, DUF4435, Protein of unknown function (DUF4435)	NA|274aa|down_1|NZ_CP017877.1_48098_48920_-	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|88aa|down_2|NZ_CP017877.1_49199_49463_-	NA	NA|410aa|down_3|NZ_CP017877.1_49570_50800_-	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|220aa|down_4|NZ_CP017877.1_50881_51541_-	NA	NA|204aa|down_5|NZ_CP017877.1_51544_52156_-	NA	NA|94aa|down_6|NZ_CP017877.1_52186_52468_-	pfam12725, DUF3810, Protein of unknown function (DUF3810)	NA|184aa|down_7|NZ_CP017877.1_52660_53212_+	NA	NA|463aa|down_8|NZ_CP017877.1_53211_54600_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|NA	NA
GCF_001865535.1_ASM186553v1	NZ_CP017876	Campylobacter coli strain ZV1224 plasmid pCCDM224S, complete sequence	1	10940-11047	1	CRISPRCasFinder	no	cas14j,c2c9_V-U4	cas14j,c2c9_V-U4	Unclear	TTTTTTTCATTTTCTTGAGACAAAAT	26	0	0	NA	NA	NA	1	1	TypeV	WYL,csa3,cas9,cas1,cas2,cas14j,DEDDh,c2c9_V-U4	NA|75aa|up_7|NZ_CP017876.1_3124_3349_-,NA|237aa|down_0|NZ_CP017876.1_11067_11778_-,NA|282aa|down_3|NZ_CP017876.1_12855_13701_-,NA|112aa|down_4|NZ_CP017876.1_14403_14739_+,NA|108aa|down_5|NZ_CP017876.1_14733_15057_-	NA|232aa|up_9|NZ_CP017876.1_930_1626_-	PRK13887, PRK13887, conjugal transfer protein TrbF; Provisional	NA|414aa|up_8|NZ_CP017876.1_1956_3198_-	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL	NA|75aa|up_7|NZ_CP017876.1_3124_3349_-	NA	NA|251aa|up_6|NZ_CP017876.1_3392_4145_-	TIGR02780, TrbJ_protein, P-type conjugative transfer protein TrbJ	NA|185aa|up_5|NZ_CP017876.1_4732_5287_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|211aa|up_4|NZ_CP017876.1_5741_6374_-	pfam07424, TrbM, TrbM	NA|822aa|up_3|NZ_CP017876.1_6604_9070_-	PRK13891, PRK13891, conjugal transfer protein TrbE; Provisional	NA|97aa|up_2|NZ_CP017876.1_9073_9364_-	PRK13823, PRK13823, conjugal transfer protein TrbD; Provisional	NA|99aa|up_1|NZ_CP017876.1_9363_9660_-	PRK13892, PRK13892, conjugal transfer protein TrbC; Provisional	NA|312aa|up_0|NZ_CP017876.1_9669_10605_-	TIGR02782, conjugal_transfer_protein, P-type conjugative transfer ATPase TrbB	NA|237aa|down_0|NZ_CP017876.1_11067_11778_-	NA	NA|221aa|down_1|NZ_CP017876.1_11770_12433_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|138aa|down_2|NZ_CP017876.1_12445_12859_-	cd09854, PIN_VapC-like, VapC-like PIN domains of VapC and Smg6 ribonucleases, ribosome assembly factor NOB1, rRNA-processing protein Fcf1, Archaeoglobus fulgidus AF0591 protein, and homologs	NA|282aa|down_3|NZ_CP017876.1_12855_13701_-	NA	NA|112aa|down_4|NZ_CP017876.1_14403_14739_+	NA	NA|108aa|down_5|NZ_CP017876.1_14733_15057_-	NA	NA|128aa|down_6|NZ_CP017876.1_15256_15640_+	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ	NA|718aa|down_7|NZ_CP017876.1_15602_17756_+	PRK13878, PRK13878, conjugal transfer relaxase TraI; Provisional	cas14j|413aa|down_8|NZ_CP017876.1_17915_19154_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|158aa|down_9|NZ_CP017876.1_19140_19614_-	pfam01797, Y1_Tnp, Transposase IS200 like
