assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001865495.1_ASM186549v1	NZ_CP017871	Campylobacter coli strain BP3183 chromosome, complete genome	1	354072-354701	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	csa3,cas9,cas1,cas2,cas14j,DEDDh	Type II-A,Type II-B, or Type II-C?, Type II-B,Type II-C	ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAA,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC	35,36,36	0	0	NA	NA	NA:NA:NA	9,9,9	9	TypeII-A,TypeII-B,orTypeII-C?,TypeII-B,TypeII-C	csa3,cas9,cas1,cas2,cas14j,DEDDh	NA,NA	NA|195aa|up_9|NZ_CP017871.1_342149_342734_+	cd00741, Lipase, Lipase	NA|346aa|up_8|NZ_CP017871.1_342847_343885_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|244aa|up_7|NZ_CP017871.1_343891_344623_-	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|250aa|up_6|NZ_CP017871.1_344597_345347_-	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|202aa|up_5|NZ_CP017871.1_345343_345949_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|330aa|up_4|NZ_CP017871.1_346009_346999_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|326aa|up_3|NZ_CP017871.1_347056_348034_+	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	cas9|985aa|up_2|NZ_CP017871.1_349661_352616_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|297aa|up_1|NZ_CP017871.1_352612_353503_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|144aa|up_0|NZ_CP017871.1_353495_353927_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|397aa|down_0|NZ_CP017871.1_354820_356011_-	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	NA|139aa|down_1|NZ_CP017871.1_356013_356430_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|148aa|down_2|NZ_CP017871.1_356426_356870_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|74aa|down_3|NZ_CP017871.1_356870_357092_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|514aa|down_4|NZ_CP017871.1_357093_358635_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|383aa|down_5|NZ_CP017871.1_358758_359907_+	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|238aa|down_6|NZ_CP017871.1_360211_360925_+	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|64aa|down_7|NZ_CP017871.1_360899_361091_+	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|181aa|down_8|NZ_CP017871.1_361090_361633_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|738aa|down_9|NZ_CP017871.1_361681_363895_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E
GCF_001865495.1_ASM186549v1	NZ_CP017872	Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence	1	6189-6284	1	CRISPRCasFinder	no			Orphan	AGAAATCATTACATTTAAGTCAA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas9,cas1,cas2,cas14j,DEDDh	NA|184aa|up_6|NZ_CP017872.1_1617_2169_-,NA|94aa|up_5|NZ_CP017872.1_2362_2644_+,NA|204aa|up_4|NZ_CP017872.1_2671_3283_+,NA|220aa|up_3|NZ_CP017872.1_3286_3946_+,NA|98aa|up_1|NZ_CP017872.1_5372_5666_+,NA|92aa|up_0|NZ_CP017872.1_5744_6020_-,NA|108aa|down_5|NZ_CP017872.1_9861_10185_-,NA|184aa|down_9|NZ_CP017872.1_13963_14515_+	NA|NA	NA	NA|NA	NA	NA|463aa|up_7|NZ_CP017872.1_229_1618_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|184aa|up_6|NZ_CP017872.1_1617_2169_-	NA	NA|94aa|up_5|NZ_CP017872.1_2362_2644_+	NA	NA|204aa|up_4|NZ_CP017872.1_2671_3283_+	NA	NA|220aa|up_3|NZ_CP017872.1_3286_3946_+	NA	NA|409aa|up_2|NZ_CP017872.1_4028_5255_+	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|up_1|NZ_CP017872.1_5372_5666_+	NA	NA|92aa|up_0|NZ_CP017872.1_5744_6020_-	NA	NA|73aa|down_0|NZ_CP017872.1_6511_6730_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|68aa|down_1|NZ_CP017872.1_6722_6926_+	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family    [General function prediction only]	NA|598aa|down_2|NZ_CP017872.1_6929_8723_+	cd01125, repA, Hexameric Replicative Helicase RepA	NA|205aa|down_3|NZ_CP017872.1_8852_9467_-	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|136aa|down_4|NZ_CP017872.1_9463_9871_-	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown]	NA|108aa|down_5|NZ_CP017872.1_9861_10185_-	NA	NA|88aa|down_6|NZ_CP017872.1_10354_10618_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|923aa|down_7|NZ_CP017872.1_10630_13399_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|186aa|down_8|NZ_CP017872.1_13409_13967_+	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha)	NA|184aa|down_9|NZ_CP017872.1_13963_14515_+	NA
