assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001857925.1_ASM185792v1	NZ_CP017786	Bacillus xiamenensis strain VV3 chromosome, complete genome	1	782388-782880	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	Orphan	ATTTCAATCCACGCACTCATGTAGAGTGCGAC,ATTTCAATCCACGCACTCATGTAGAGTGCGAC,ATTTCAATCCACGCACTCATGTAGAGTGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	7,7,5	7	Orphan	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	NA|55aa|up_4|NZ_CP017786.1_778746_778911_-,NA|75aa|up_2|NZ_CP017786.1_779804_780029_+,NA	NA|326aa|up_9|NZ_CP017786.1_773713_774691_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|341aa|up_8|NZ_CP017786.1_774659_775682_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|581aa|up_7|NZ_CP017786.1_775794_777537_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|177aa|up_6|NZ_CP017786.1_777633_778164_-	PRK13662, PRK13662, hypothetical protein; Provisional	NA|87aa|up_5|NZ_CP017786.1_778311_778572_-	pfam14182, YgaB, YgaB-like protein	NA|55aa|up_4|NZ_CP017786.1_778746_778911_-	NA	NA|251aa|up_3|NZ_CP017786.1_778970_779723_-	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|75aa|up_2|NZ_CP017786.1_779804_780029_+	NA	NA|367aa|up_1|NZ_CP017786.1_780015_781116_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|327aa|up_0|NZ_CP017786.1_781307_782288_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|74aa|down_0|NZ_CP017786.1_783793_784015_-	PRK14082, PRK14082, hypothetical protein; Provisional	NA|201aa|down_1|NZ_CP017786.1_783962_784565_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|55aa|down_2|NZ_CP017786.1_784731_784896_+	pfam12841, YvrJ, YvrJ protein family	NA|388aa|down_3|NZ_CP017786.1_784990_786154_+	TIGR03404, Oxalate_decarboxylase_OxdC, bicupin, oxalate decarboxylase family	NA|141aa|down_4|NZ_CP017786.1_786224_786647_+	pfam14184, YrvL, Regulatory protein YrvL	NA|864aa|down_5|NZ_CP017786.1_787178_789770_-	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|328aa|down_6|NZ_CP017786.1_789857_790841_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|91aa|down_7|NZ_CP017786.1_791139_791412_-	pfam14043, WVELL, WVELL protein	NA|50aa|down_8|NZ_CP017786.1_791528_791678_+	pfam08176, SspK, Small acid-soluble spore protein K family	NA|58aa|down_9|NZ_CP017786.1_791703_791877_+	pfam14139, YpzG, YpzG-like protein
GCF_001857925.1_ASM185792v1	NZ_CP017786	Bacillus xiamenensis strain VV3 chromosome, complete genome	2	783184-783612	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	Orphan	ATTTCAATCCACGCACTCACATAGAGTGCGAC,ATTTCAATCCACGCACTCATGTAGAGTGCGAC,ATTTCAATCCACGCACTCACATAGAGTGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	6,6,6	6	Orphan	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	NA|55aa|up_4|NZ_CP017786.1_778746_778911_-,NA|75aa|up_2|NZ_CP017786.1_779804_780029_+,NA	NA|326aa|up_9|NZ_CP017786.1_773713_774691_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|341aa|up_8|NZ_CP017786.1_774659_775682_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|581aa|up_7|NZ_CP017786.1_775794_777537_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|177aa|up_6|NZ_CP017786.1_777633_778164_-	PRK13662, PRK13662, hypothetical protein; Provisional	NA|87aa|up_5|NZ_CP017786.1_778311_778572_-	pfam14182, YgaB, YgaB-like protein	NA|55aa|up_4|NZ_CP017786.1_778746_778911_-	NA	NA|251aa|up_3|NZ_CP017786.1_778970_779723_-	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|75aa|up_2|NZ_CP017786.1_779804_780029_+	NA	NA|367aa|up_1|NZ_CP017786.1_780015_781116_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|327aa|up_0|NZ_CP017786.1_781307_782288_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|74aa|down_0|NZ_CP017786.1_783793_784015_-	PRK14082, PRK14082, hypothetical protein; Provisional	NA|201aa|down_1|NZ_CP017786.1_783962_784565_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|55aa|down_2|NZ_CP017786.1_784731_784896_+	pfam12841, YvrJ, YvrJ protein family	NA|388aa|down_3|NZ_CP017786.1_784990_786154_+	TIGR03404, Oxalate_decarboxylase_OxdC, bicupin, oxalate decarboxylase family	NA|141aa|down_4|NZ_CP017786.1_786224_786647_+	pfam14184, YrvL, Regulatory protein YrvL	NA|864aa|down_5|NZ_CP017786.1_787178_789770_-	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|328aa|down_6|NZ_CP017786.1_789857_790841_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|91aa|down_7|NZ_CP017786.1_791139_791412_-	pfam14043, WVELL, WVELL protein	NA|50aa|down_8|NZ_CP017786.1_791528_791678_+	pfam08176, SspK, Small acid-soluble spore protein K family	NA|58aa|down_9|NZ_CP017786.1_791703_791877_+	pfam14139, YpzG, YpzG-like protein
GCF_001857925.1_ASM185792v1	NZ_CP017786	Bacillus xiamenensis strain VV3 chromosome, complete genome	3	1733726-1733820	3	CRISPRCasFinder	no		DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	Orphan	AGTAGAGTTAAAAGCTTTCACGA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	NA,NA	NA|398aa|up_9|NZ_CP017786.1_1722187_1723381_+	cd17396, MFS_YdiM_like, Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters	NA|301aa|up_8|NZ_CP017786.1_1723428_1724331_-	PRK12548, PRK12548, shikimate dehydrogenase	NA|394aa|up_7|NZ_CP017786.1_1724349_1725531_-	cd17396, MFS_YdiM_like, Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters	NA|341aa|up_6|NZ_CP017786.1_1726108_1727131_-	cd06289, PBP1_MalI-like, ligand-binding domain of MalI, a transcription regulator of the maltose system of Escherichia coli and its close homologs from other bacteria	NA|450aa|up_5|NZ_CP017786.1_1727651_1729001_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|227aa|up_4|NZ_CP017786.1_1729044_1729725_-	pfam11368, DUF3169, Protein of unknown function (DUF3169)	NA|69aa|up_3|NZ_CP017786.1_1729721_1729928_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|208aa|up_2|NZ_CP017786.1_1730097_1730721_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|161aa|up_1|NZ_CP017786.1_1730732_1731215_-	pfam13826, DUF4188, Domain of unknown function (DUF4188)	NA|184aa|up_0|NZ_CP017786.1_1731219_1731771_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|393aa|down_0|NZ_CP017786.1_1734103_1735282_-	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal	NA|254aa|down_1|NZ_CP017786.1_1735940_1736702_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|776aa|down_2|NZ_CP017786.1_1736715_1739043_-	pfam02687, FtsX, FtsX-like permease family	NA|418aa|down_3|NZ_CP017786.1_1739039_1740293_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|217aa|down_4|NZ_CP017786.1_1740361_1741012_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|380aa|down_5|NZ_CP017786.1_1741333_1742473_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|113aa|down_6|NZ_CP017786.1_1742566_1742905_+	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|310aa|down_7|NZ_CP017786.1_1743233_1744163_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|317aa|down_8|NZ_CP017786.1_1744159_1745110_+	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]	NA|143aa|down_9|NZ_CP017786.1_1745134_1745563_+	pfam13273, DUF4064, Protein of unknown function (DUF4064)
GCF_001857925.1_ASM185792v1	NZ_CP017786	Bacillus xiamenensis strain VV3 chromosome, complete genome	4	2274138-2274228	4	CRISPRCasFinder	no		DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	Orphan	AGCTGTGCCCCATAAGGGCACAGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	NA,NA	NA|377aa|up_9|NZ_CP017786.1_2263059_2264190_+	cd03812, GT4_CapH-like, capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins	NA|368aa|up_8|NZ_CP017786.1_2264204_2265308_+	pfam14897, EpsG, EpsG family	NA|343aa|up_7|NZ_CP017786.1_2265335_2266364_+	PRK10073, PRK10073, putative glycosyl transferase; Provisional	NA|343aa|up_6|NZ_CP017786.1_2266363_2267392_+	COG5039, COG5039, Exopolysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|510aa|up_5|NZ_CP017786.1_2267420_2268950_+	cd12082, MATE_like, Multidrug and toxic compound extrusion family and similar proteins	NA|199aa|up_4|NZ_CP017786.1_2268967_2269564_+	pfam02397, Bac_transf, Bacterial sugar transferase	NA|229aa|up_3|NZ_CP017786.1_2269526_2270213_+	cd03360, LbH_AT_putative, Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain	NA|393aa|up_2|NZ_CP017786.1_2270212_2271391_+	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family	NA|72aa|up_1|NZ_CP017786.1_2271641_2271857_-	pfam09628, YvfG, YvfG protein	NA|433aa|up_0|NZ_CP017786.1_2271927_2273226_+	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|481aa|down_0|NZ_CP017786.1_2274232_2275675_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|398aa|down_1|NZ_CP017786.1_2275886_2277080_+	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|474aa|down_2|NZ_CP017786.1_2277181_2278603_+	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism]	NA|346aa|down_3|NZ_CP017786.1_2278891_2279929_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|336aa|down_4|NZ_CP017786.1_2279962_2280970_+	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|395aa|down_5|NZ_CP017786.1_2281184_2282369_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_6|NZ_CP017786.1_2282399_2283161_+	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|512aa|down_7|NZ_CP017786.1_2283153_2284689_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|431aa|down_8|NZ_CP017786.1_2284718_2286011_+	PRK00077, eno, enolase; Provisional	NA|89aa|down_9|NZ_CP017786.1_2286259_2286526_+	TIGR03503, TIGR03503, TIGR03503 family protein
GCF_001857925.1_ASM185792v1	NZ_CP017786	Bacillus xiamenensis strain VV3 chromosome, complete genome	5	3027374-3028006	3,5,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	 Type I-U?,Type I-C,Type I-U	ATTTCAATCCACGCACTCATGTAGAGTGCGAC,GTCGCACTCTACATGAGTGCGTGGATTGAAAT,GTCGCACTCTACATGAGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	8,9,9	9	TypeI-U?,TypeI-C,TypeI-U	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG	NA|72aa|up_9|NZ_CP017786.1_3017384_3017600_-,NA|106aa|up_8|NZ_CP017786.1_3017635_3017953_-,NA|50aa|down_5|NZ_CP017786.1_3032923_3033073_+	NA|72aa|up_9|NZ_CP017786.1_3017384_3017600_-	NA	NA|106aa|up_8|NZ_CP017786.1_3017635_3017953_-	NA	NA|98aa|up_7|NZ_CP017786.1_3018136_3018430_+	pfam11122, Spore-coat_CotD, Inner spore coat protein D	cas3|808aa|up_6|NZ_CP017786.1_3019251_3021675_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|241aa|up_5|NZ_CP017786.1_3021752_3022475_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|626aa|up_4|NZ_CP017786.1_3022471_3024349_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|287aa|up_3|NZ_CP017786.1_3024352_3025213_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|220aa|up_2|NZ_CP017786.1_3025202_3025862_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|344aa|up_1|NZ_CP017786.1_3025858_3026890_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP017786.1_3026902_3027193_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|91aa|down_0|NZ_CP017786.1_3028636_3028909_+	pfam13143, DUF3986, Protein of unknown function (DUF3986)	NA|243aa|down_1|NZ_CP017786.1_3029043_3029772_-	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK	NA|374aa|down_2|NZ_CP017786.1_3030003_3031125_+	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal	NA|247aa|down_3|NZ_CP017786.1_3031291_3032032_+	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins	NA|248aa|down_4|NZ_CP017786.1_3032101_3032845_+	cd01838, Isoamyl_acetate_hydrolase_like, Isoamyl-acetate hydrolyzing esterase-like proteins	NA|50aa|down_5|NZ_CP017786.1_3032923_3033073_+	NA	NA|47aa|down_6|NZ_CP017786.1_3033208_3033349_-	pfam08970, Sda, Sporulation inhibitor A	NA|174aa|down_7|NZ_CP017786.1_3033711_3034233_+	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]	NA|367aa|down_8|NZ_CP017786.1_3034235_3035336_+	PRK13796, PRK13796, GTPase YqeH; Provisional	NA|281aa|down_9|NZ_CP017786.1_3035357_3036200_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed
