assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	1	227013-227104	1	CRISPRCasFinder	no	DEDDh	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Unclear	GGGGACGACCCCTCCACGTCGCTTCG	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA,NA|138aa|down_4|NZ_CP015970.1_231946_232360_-,NA|405aa|down_9|NZ_CP015970.1_237712_238927_-	NA|171aa|up_9|NZ_CP015970.1_217367_217880_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|215aa|up_8|NZ_CP015970.1_217960_218605_+	pfam01694, Rhomboid, Rhomboid family	NA|92aa|up_7|NZ_CP015970.1_218672_218948_-	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain	DEDDh|605aa|up_6|NZ_CP015970.1_218965_220780_-	PRK07883, PRK07883, DEDD exonuclease domain-containing protein	NA|376aa|up_5|NZ_CP015970.1_221031_222159_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|362aa|up_4|NZ_CP015970.1_222163_223249_+	TIGR00744, Glucokinase_Glucose_kinase	NA|257aa|up_3|NZ_CP015970.1_223333_224104_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|285aa|up_2|NZ_CP015970.1_224100_224955_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|409aa|up_1|NZ_CP015970.1_224938_226165_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|225aa|up_0|NZ_CP015970.1_226328_227003_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|465aa|down_0|NZ_CP015970.1_227183_228578_+	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family	NA|216aa|down_1|NZ_CP015970.1_228651_229299_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|316aa|down_2|NZ_CP015970.1_229300_230248_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|487aa|down_3|NZ_CP015970.1_230344_231805_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|138aa|down_4|NZ_CP015970.1_231946_232360_-	NA	NA|230aa|down_5|NZ_CP015970.1_232507_233197_+	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|367aa|down_6|NZ_CP015970.1_233218_234319_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|306aa|down_7|NZ_CP015970.1_234380_235298_+	TIGR00676, 510-methylenetetrahydrofolate_reductase	NA|752aa|down_8|NZ_CP015970.1_235224_237480_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|405aa|down_9|NZ_CP015970.1_237712_238927_-	NA
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	2	621960-622048	2	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	ACCCCCTGCACCCCCGGGCGGGGACT	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|190aa|up_9|NZ_CP015970.1_609233_609803_+,NA|195aa|down_5|NZ_CP015970.1_627938_628523_-	NA|190aa|up_9|NZ_CP015970.1_609233_609803_+	NA	NA|961aa|up_8|NZ_CP015970.1_609799_612682_+	pfam03699, UPF0182, Uncharacterized protein family (UPF0182)	NA|197aa|up_7|NZ_CP015970.1_612678_613269_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|805aa|up_6|NZ_CP015970.1_613287_615702_+	PRK15098, PRK15098, beta-glucosidase BglX	NA|250aa|up_5|NZ_CP015970.1_616143_616893_+	pfam13398, Peptidase_M50B, Peptidase M50B-like	NA|500aa|up_4|NZ_CP015970.1_617048_618548_+	cd08494, PBP2_NikA_DppA_OppA_like_6, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|324aa|up_3|NZ_CP015970.1_618544_619516_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|271aa|up_2|NZ_CP015970.1_619512_620325_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|up_1|NZ_CP015970.1_620321_621137_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|271aa|up_0|NZ_CP015970.1_621133_621946_+	cd03257, ABC_NikE_OppD_transporters, ATP-binding cassette domain of nickel/oligopeptides specific transporters	NA|397aa|down_0|NZ_CP015970.1_622134_623325_+	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|262aa|down_1|NZ_CP015970.1_623357_624143_-	TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family	NA|483aa|down_2|NZ_CP015970.1_624173_625622_+	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]	NA|332aa|down_3|NZ_CP015970.1_625640_626636_-	cd01854, YjeQ_EngC, Ribosomal interacting GTPase YjeQ/EngC, a circularly permuted subfamily of the Ras GTPases	NA|438aa|down_4|NZ_CP015970.1_626632_627946_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|195aa|down_5|NZ_CP015970.1_627938_628523_-	NA	NA|222aa|down_6|NZ_CP015970.1_628727_629393_+	TIGR02947, putative_RNA_polymerase_sigma_factor, RNA polymerase sigma-70 factor, TIGR02947 family	NA|86aa|down_7|NZ_CP015970.1_629389_629647_+	TIGR02949, putative_anti-sigma_factor, anti-sigma factor, TIGR02949 family	NA|491aa|down_8|NZ_CP015970.1_630044_631517_+	pfam12282, H_kinase_N, Signal transduction histidine kinase	NA|84aa|down_9|NZ_CP015970.1_631547_631799_-	pfam02467, Whib, Transcription factor WhiB
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	3	1116174-1116281	3	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	GGGGGGCAACCCCCCTGCACCCCCTGGCG	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|54aa|up_9|NZ_CP015970.1_1104621_1104783_+,NA|197aa|up_8|NZ_CP015970.1_1104832_1105423_+,NA|101aa|up_7|NZ_CP015970.1_1110860_1111163_+,NA|174aa|up_5|NZ_CP015970.1_1111977_1112499_+,NA	NA|54aa|up_9|NZ_CP015970.1_1104621_1104783_+	NA	NA|197aa|up_8|NZ_CP015970.1_1104832_1105423_+	NA	NA|101aa|up_7|NZ_CP015970.1_1110860_1111163_+	NA	NA|161aa|up_6|NZ_CP015970.1_1111458_1111941_-	pfam07179, SseB, SseB protein N-terminal domain	NA|174aa|up_5|NZ_CP015970.1_1111977_1112499_+	NA	NA|287aa|up_4|NZ_CP015970.1_1112547_1113408_-	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|89aa|up_3|NZ_CP015970.1_1113419_1113686_-	cd11547, NTP-PPase_HisE, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|225aa|up_2|NZ_CP015970.1_1113743_1114418_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|194aa|up_1|NZ_CP015970.1_1114547_1115129_-	pfam11290, DUF3090, Protein of unknown function (DUF3090)	NA|320aa|up_0|NZ_CP015970.1_1115210_1116170_+	COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion]	NA|451aa|down_0|NZ_CP015970.1_1117581_1118934_-	PRK07906, PRK07906, hypothetical protein; Provisional	NA|338aa|down_1|NZ_CP015970.1_1119233_1120247_-	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators	NA|504aa|down_2|NZ_CP015970.1_1120372_1121884_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|239aa|down_3|NZ_CP015970.1_1121943_1122660_-	PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated	NA|467aa|down_4|NZ_CP015970.1_1123001_1124402_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|338aa|down_5|NZ_CP015970.1_1124508_1125522_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|273aa|down_6|NZ_CP015970.1_1127938_1128757_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|633aa|down_7|NZ_CP015970.1_1128765_1130664_+	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown]	NA|353aa|down_8|NZ_CP015970.1_1130704_1131763_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|300aa|down_9|NZ_CP015970.1_1131774_1132674_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	4	1992300-1997753	1,4,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	csb1gr7,csb2gr5,cas3,csb3,cas1,cas2	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Unclear	ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC,ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC,ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC,ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	36,36,36,36	1	1	1993944-1993978	NZ_CP015970.1_3491875-3491909	NA:NA:NA:NA	73,75,75,73	75	Unclear	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|356aa|up_7|NZ_CP015970.1_1978813_1979881_-,NA|217aa|up_6|NZ_CP015970.1_1980021_1980672_-,NA	NA|826aa|up_9|NZ_CP015970.1_1975636_1978114_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|230aa|up_8|NZ_CP015970.1_1978110_1978800_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|356aa|up_7|NZ_CP015970.1_1978813_1979881_-	NA	NA|217aa|up_6|NZ_CP015970.1_1980021_1980672_-	NA	csb1gr7|403aa|up_5|NZ_CP015970.1_1983814_1985023_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|528aa|up_4|NZ_CP015970.1_1985025_1986609_+	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas3|876aa|up_3|NZ_CP015970.1_1986605_1989233_+	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb3|333aa|up_2|NZ_CP015970.1_1989229_1990228_+	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas1|535aa|up_1|NZ_CP015970.1_1990214_1991819_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|100aa|up_0|NZ_CP015970.1_1991815_1992115_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_0|NZ_CP015970.1_1997767_1998883_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|436aa|down_1|NZ_CP015970.1_2000408_2001716_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|193aa|down_2|NZ_CP015970.1_2001843_2002422_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|374aa|down_3|NZ_CP015970.1_2002732_2003854_+	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily	NA|213aa|down_4|NZ_CP015970.1_2004179_2004818_+	TIGR00393, Probable_arabinose_5-phosphate_isomerase, KpsF/GutQ family protein	NA|326aa|down_5|NZ_CP015970.1_2004810_2005788_+	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|361aa|down_6|NZ_CP015970.1_2005784_2006867_+	pfam11175, DUF2961, Protein of unknown function (DUF2961)	NA|395aa|down_7|NZ_CP015970.1_2006874_2008059_+	pfam13810, DUF4185, Domain of unknown function (DUF4185)	NA|456aa|down_8|NZ_CP015970.1_2008211_2009579_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|314aa|down_9|NZ_CP015970.1_2009584_2010526_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	5	1998949-2000362	3,5,2	PILER-CR,CRISPRCasFinder,CRT	no	csb1gr7,csb2gr5,cas3,csb3,cas1,cas2	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Unclear	ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC,ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC,ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	36,36,36	1	1	1999203-1999239	NZ_CP015970.1_3462734-3462770	NA:NA:NA	19,19,19	19	Unclear	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|356aa|up_8|NZ_CP015970.1_1978813_1979881_-,NA|217aa|up_7|NZ_CP015970.1_1980021_1980672_-,NA	NA|230aa|up_9|NZ_CP015970.1_1978110_1978800_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|356aa|up_8|NZ_CP015970.1_1978813_1979881_-	NA	NA|217aa|up_7|NZ_CP015970.1_1980021_1980672_-	NA	csb1gr7|403aa|up_6|NZ_CP015970.1_1983814_1985023_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|528aa|up_5|NZ_CP015970.1_1985025_1986609_+	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas3|876aa|up_4|NZ_CP015970.1_1986605_1989233_+	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb3|333aa|up_3|NZ_CP015970.1_1989229_1990228_+	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas1|535aa|up_2|NZ_CP015970.1_1990214_1991819_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|100aa|up_1|NZ_CP015970.1_1991815_1992115_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|372aa|up_0|NZ_CP015970.1_1997767_1998883_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|436aa|down_0|NZ_CP015970.1_2000408_2001716_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|193aa|down_1|NZ_CP015970.1_2001843_2002422_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|374aa|down_2|NZ_CP015970.1_2002732_2003854_+	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily	NA|213aa|down_3|NZ_CP015970.1_2004179_2004818_+	TIGR00393, Probable_arabinose_5-phosphate_isomerase, KpsF/GutQ family protein	NA|326aa|down_4|NZ_CP015970.1_2004810_2005788_+	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|361aa|down_5|NZ_CP015970.1_2005784_2006867_+	pfam11175, DUF2961, Protein of unknown function (DUF2961)	NA|395aa|down_6|NZ_CP015970.1_2006874_2008059_+	pfam13810, DUF4185, Domain of unknown function (DUF4185)	NA|456aa|down_7|NZ_CP015970.1_2008211_2009579_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|314aa|down_8|NZ_CP015970.1_2009584_2010526_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|283aa|down_9|NZ_CP015970.1_2010572_2011421_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	6	2071483-2071606	6	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	CCGACTCGCCGCCCGGGGGTGCAGGGGGTCGGCCCCCGCC	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|68aa|up_3|NZ_CP015970.1_2069871_2070075_+,NA	NA|388aa|up_9|NZ_CP015970.1_2063041_2064205_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|214aa|up_8|NZ_CP015970.1_2064201_2064843_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|227aa|up_7|NZ_CP015970.1_2064839_2065520_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|340aa|up_6|NZ_CP015970.1_2065516_2066536_+	cd13606, PBP2_ProX_like, Bacterial substrate-binding protein ProX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold	NA|508aa|up_5|NZ_CP015970.1_2066867_2068391_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|314aa|up_4|NZ_CP015970.1_2068673_2069615_+	pfam01844, HNH, HNH endonuclease	NA|68aa|up_3|NZ_CP015970.1_2069871_2070075_+	NA	NA|98aa|up_2|NZ_CP015970.1_2070075_2070369_-	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG	NA|75aa|up_1|NZ_CP015970.1_2070365_2070590_-	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG	NA|165aa|up_0|NZ_CP015970.1_2070535_2071030_-	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG	NA|440aa|down_0|NZ_CP015970.1_2071616_2072936_-	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|148aa|down_1|NZ_CP015970.1_2073212_2073656_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|243aa|down_2|NZ_CP015970.1_2073709_2074438_-	TIGR03941, conserved_hypothetical_protein, putative tRNA adenosine deaminase-associated protein	NA|209aa|down_3|NZ_CP015970.1_2074617_2075244_+	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|282aa|down_4|NZ_CP015970.1_2075240_2076086_+	COG3777, COG3777, Uncharacterized conserved protein [Function unknown]	NA|174aa|down_5|NZ_CP015970.1_2076202_2076724_-	cd04939, PA2301, PA2301 is an uncharacterized Pseudomonas aeruginosa protein with a YbaK-like domain of unknown function	NA|435aa|down_6|NZ_CP015970.1_2076826_2078131_+	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|641aa|down_7|NZ_CP015970.1_2078239_2080162_+	cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase)	NA|337aa|down_8|NZ_CP015970.1_2080200_2081211_-	cd05288, PGDH, Prostaglandin dehydrogenases	NA|689aa|down_9|NZ_CP015970.1_2081362_2083429_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	7	2096130-2096248	7	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	CCTCCCCGAGCGGGGCGGGGTCCACGACTCG	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|292aa|up_8|NZ_CP015970.1_2084189_2085065_-,NA|88aa|up_2|NZ_CP015970.1_2093706_2093970_+,NA	NA|246aa|up_9|NZ_CP015970.1_2083421_2084159_-	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins	NA|292aa|up_8|NZ_CP015970.1_2084189_2085065_-	NA	NA|232aa|up_7|NZ_CP015970.1_2085178_2085874_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|494aa|up_6|NZ_CP015970.1_2087818_2089300_+	COG1316, LytR, Transcriptional regulator [Transcription]	NA|351aa|up_5|NZ_CP015970.1_2089375_2090428_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|409aa|up_4|NZ_CP015970.1_2090424_2091651_-	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism]	NA|569aa|up_3|NZ_CP015970.1_2091983_2093690_+	cd11478, SLC5sbd_u2, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|88aa|up_2|NZ_CP015970.1_2093706_2093970_+	NA	NA|168aa|up_1|NZ_CP015970.1_2094140_2094644_-	PRK05415, PRK05415, hypothetical protein; Provisional	NA|334aa|up_0|NZ_CP015970.1_2095082_2096084_+	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|473aa|down_0|NZ_CP015970.1_2096432_2097851_+	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|417aa|down_1|NZ_CP015970.1_2098177_2099428_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|633aa|down_2|NZ_CP015970.1_2099475_2101374_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|168aa|down_3|NZ_CP015970.1_2101771_2102275_+	pfam08281, Sigma70_r4_2, Sigma-70, region 4	NA|267aa|down_4|NZ_CP015970.1_2102440_2103241_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|362aa|down_5|NZ_CP015970.1_2103340_2104426_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|439aa|down_6|NZ_CP015970.1_2104597_2105914_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|331aa|down_7|NZ_CP015970.1_2106030_2107023_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|280aa|down_8|NZ_CP015970.1_2107015_2107855_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|664aa|down_9|NZ_CP015970.1_2107930_2109922_+	COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	8	2976199-2976329	8	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	CGGTCGGGTCCGTGGGAGGTGGGTCGGCACCCGTGGCCACGCGT	44	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|378aa|up_7|NZ_CP015970.1_2967204_2968338_+,NA|155aa|up_6|NZ_CP015970.1_2968439_2968904_+,NA|82aa|up_5|NZ_CP015970.1_2968888_2969134_-,NA|179aa|down_0|NZ_CP015970.1_2976448_2976985_+,NA|107aa|down_3|NZ_CP015970.1_2978287_2978608_-	NA|746aa|up_9|NZ_CP015970.1_2963110_2965348_-	NF033189, internalin_A, class 1 internalin InlA	NA|475aa|up_8|NZ_CP015970.1_2965399_2966824_-	pfam06662, C5-epim_C, D-glucuronyl C5-epimerase C-terminus	NA|378aa|up_7|NZ_CP015970.1_2967204_2968338_+	NA	NA|155aa|up_6|NZ_CP015970.1_2968439_2968904_+	NA	NA|82aa|up_5|NZ_CP015970.1_2968888_2969134_-	NA	NA|277aa|up_4|NZ_CP015970.1_2969264_2970095_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|450aa|up_3|NZ_CP015970.1_2970235_2971585_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|205aa|up_2|NZ_CP015970.1_2971715_2972330_+	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|849aa|up_1|NZ_CP015970.1_2972326_2974873_+	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB	NA|392aa|up_0|NZ_CP015970.1_2974976_2976152_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|179aa|down_0|NZ_CP015970.1_2976448_2976985_+	NA	NA|206aa|down_1|NZ_CP015970.1_2977016_2977634_-	PRK00802, PRK00802, DNA-3-methyladenine glycosylase	NA|210aa|down_2|NZ_CP015970.1_2977682_2978312_+	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|107aa|down_3|NZ_CP015970.1_2978287_2978608_-	NA	NA|334aa|down_4|NZ_CP015970.1_2978631_2979633_-	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|170aa|down_5|NZ_CP015970.1_2979736_2980246_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|172aa|down_6|NZ_CP015970.1_2980260_2980776_+	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|337aa|down_7|NZ_CP015970.1_2980814_2981825_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|106aa|down_8|NZ_CP015970.1_2981866_2982184_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|610aa|down_9|NZ_CP015970.1_2982674_2984504_-	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	9	3058249-3058379	9	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	TATCCACGCGGCGACGCTGTGGTGGCAGAACTCATTCCCG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA,NA|302aa|down_1|NZ_CP015970.1_3059157_3060063_-	NA|497aa|up_9|NZ_CP015970.1_3044511_3046002_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|381aa|up_8|NZ_CP015970.1_3046155_3047298_+	cd08183, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like	NA|596aa|up_7|NZ_CP015970.1_3047301_3049089_-	pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35	NA|453aa|up_6|NZ_CP015970.1_3049196_3050555_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|295aa|up_5|NZ_CP015970.1_3050667_3051552_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|310aa|up_4|NZ_CP015970.1_3051548_3052478_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|347aa|up_3|NZ_CP015970.1_3052606_3053647_+	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators	NA|689aa|up_2|NZ_CP015970.1_3053678_3055745_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|579aa|up_1|NZ_CP015970.1_3055741_3057478_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|226aa|up_0|NZ_CP015970.1_3057468_3058146_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|218aa|down_0|NZ_CP015970.1_3058429_3059083_+	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p)	NA|302aa|down_1|NZ_CP015970.1_3059157_3060063_-	NA	NA|194aa|down_2|NZ_CP015970.1_3060197_3060779_+	pfam12724, Flavodoxin_5, Flavodoxin domain	NA|326aa|down_3|NZ_CP015970.1_3060852_3061830_-	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|289aa|down_4|NZ_CP015970.1_3061826_3062693_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|262aa|down_5|NZ_CP015970.1_3065780_3066566_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|251aa|down_6|NZ_CP015970.1_3066565_3067318_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|285aa|down_7|NZ_CP015970.1_3067443_3068298_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|423aa|down_8|NZ_CP015970.1_3068435_3069704_-	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed	NA|408aa|down_9|NZ_CP015970.1_3069760_3070984_-	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	10	3141825-3141929	10	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	GTTCGGGGAGGAAGCGAGCGCCTGCGCGAGCGTGGAGGGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA|119aa|up_2|NZ_CP015970.1_3137831_3138188_+,NA	NA|458aa|up_9|NZ_CP015970.1_3129947_3131321_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|257aa|up_8|NZ_CP015970.1_3131481_3132252_+	pfam17933, TetR_C_25, Tetracyclin repressor-like, C-terminal domain	NA|329aa|up_7|NZ_CP015970.1_3132244_3133231_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|539aa|up_6|NZ_CP015970.1_3133227_3134844_+	COG3559, TnrB3, Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]	NA|458aa|up_5|NZ_CP015970.1_3134874_3136248_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|243aa|up_4|NZ_CP015970.1_3136237_3136966_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|121aa|up_3|NZ_CP015970.1_3137194_3137557_-	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|119aa|up_2|NZ_CP015970.1_3137831_3138188_+	NA	NA|974aa|up_1|NZ_CP015970.1_3138418_3141340_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|110aa|up_0|NZ_CP015970.1_3141439_3141769_+	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family	NA|207aa|down_0|NZ_CP015970.1_3142012_3142633_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|105aa|down_1|NZ_CP015970.1_3142694_3143009_+	pfam01910, Thiamine_BP, Thiamine-binding protein	NA|408aa|down_2|NZ_CP015970.1_3143045_3144269_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|611aa|down_3|NZ_CP015970.1_3144413_3146246_-	pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35	NA|209aa|down_4|NZ_CP015970.1_3146400_3147027_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|260aa|down_5|NZ_CP015970.1_3147023_3147803_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|914aa|down_6|NZ_CP015970.1_3147802_3150544_+	pfam02687, FtsX, FtsX-like permease family	NA|553aa|down_7|NZ_CP015970.1_3150418_3152077_-	pfam06738, ThrE, Putative threonine/serine exporter	NA|268aa|down_8|NZ_CP015970.1_3152233_3153037_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|273aa|down_9|NZ_CP015970.1_3153036_3153855_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]
GCF_001855335.1_ASM185533v1	NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	11	3172894-3173028	11	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	Orphan	GGCGGCCTTGCGTTCGGCCGCGGCCTTGGC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2	NA,NA|238aa|down_1|NZ_CP015970.1_3175404_3176118_+	NA|647aa|up_9|NZ_CP015970.1_3161211_3163152_+	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|546aa|up_8|NZ_CP015970.1_3163382_3165020_-	cd10954, CE4_CtAXE_like, Catalytic NodB homology domain of Clostridium thermocellum acetylxylan esterase and its bacterial homologs	NA|346aa|up_7|NZ_CP015970.1_3165155_3166193_-	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|417aa|up_6|NZ_CP015970.1_3166265_3167516_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|295aa|up_5|NZ_CP015970.1_3167601_3168486_+	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold	NA|170aa|up_4|NZ_CP015970.1_3168482_3168992_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|432aa|up_3|NZ_CP015970.1_3168994_3170290_-	cd01118, ArsB_permease, Anion permease ArsB	NA|186aa|up_2|NZ_CP015970.1_3170583_3171141_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|139aa|up_1|NZ_CP015970.1_3171194_3171611_+	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|120aa|up_0|NZ_CP015970.1_3171607_3171967_+	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|287aa|down_0|NZ_CP015970.1_3174130_3174991_-	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR)	NA|238aa|down_1|NZ_CP015970.1_3175404_3176118_+	NA	NA|363aa|down_2|NZ_CP015970.1_3176128_3177217_-	pfam01083, Cutinase, Cutinase	NA|154aa|down_3|NZ_CP015970.1_3177378_3177840_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|175aa|down_4|NZ_CP015970.1_3178033_3178558_-	pfam13563, 2_5_RNA_ligase2, 2'-5' RNA ligase superfamily	NA|865aa|down_5|NZ_CP015970.1_3178807_3181402_-	pfam12029, DUF3516, Domain of unknown function (DUF3516)	NA|219aa|down_6|NZ_CP015970.1_3181680_3182337_+	cd00452, KDPG_aldolase, KDPG and KHG aldolase	NA|561aa|down_7|NZ_CP015970.1_3182427_3184110_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|224aa|down_8|NZ_CP015970.1_3184382_3185054_+	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|325aa|down_9|NZ_CP015970.1_3185191_3186166_+	cd13642, PBP2_BCP_1, Substrate-binding domain of osmoregulatory ABC-type glycine betaine/choline/L-proline transport system-like; the type 2 periplasmic-binding protein fold
