assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	1	330762-331560	1	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGNGCCGCCGGNN	18	0	0	NA	NA	NA	15	15	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP013475.1_330277_330460_-,NA	NA|398aa|up_9|NZ_CP013475.1_320455_321649_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP013475.1_321684_323367_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP013475.1_323383_325579_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP013475.1_325692_326826_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP013475.1_326822_327443_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP013475.1_327539_328121_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP013475.1_328050_328776_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP013475.1_328865_329786_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP013475.1_329825_330254_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP013475.1_330277_330460_-	NA	NA|537aa|down_0|NZ_CP013475.1_333652_335263_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP013475.1_335286_336195_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP013475.1_336418_338314_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP013475.1_338310_339927_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP013475.1_339923_343916_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP013475.1_343912_344221_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP013475.1_344223_345765_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP013475.1_345813_346107_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP013475.1_346136_346427_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP013475.1_346437_347325_+	pfam14011, ESX-1_EspG, EspG family
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	2	360752-361450	1	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	361040-361081|361115-361147	NZ_CP013475.1_369056-369097|NZ_CP013475.1_367871-367903	NA	10	10	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP013475.1_357764_358067_+,NA|161aa|down_1|NZ_CP013475.1_370845_371328_-,NA|410aa|down_5|NZ_CP013475.1_373444_374674_+	NA|262aa|up_9|NZ_CP013475.1_352459_353245_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP013475.1_353233_354037_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP013475.1_354046_355444_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP013475.1_355622_357398_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP013475.1_357540_357768_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP013475.1_357764_358067_+	NA	NA|74aa|up_3|NZ_CP013475.1_358114_358336_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP013475.1_358332_358758_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP013475.1_358893_359526_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP013475.1_359522_360431_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP013475.1_370186_370858_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP013475.1_370845_371328_-	NA	NA|239aa|down_2|NZ_CP013475.1_371385_372102_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP013475.1_372203_372860_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP013475.1_372929_373421_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP013475.1_373444_374674_+	NA	NA|621aa|down_6|NZ_CP013475.1_374828_376691_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP013475.1_376762_377149_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP013475.1_377151_377814_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP013475.1_377874_378759_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	3	625543-625680	2	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	625561-625578|625561-625578|625645-625662	NZ_CP013475.1_23824-23841|NZ_CP013475.1_1409959-1409976|NZ_CP013475.1_968583-968600	NA	3	3	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP013475.1_616297_616459_-,NA|478aa|up_0|NZ_CP013475.1_622558_623992_-,NA|450aa|down_2|NZ_CP013475.1_627315_628665_-,NA|93aa|down_5|NZ_CP013475.1_630195_630474_-	NA|325aa|up_9|NZ_CP013475.1_614067_615042_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP013475.1_615083_616301_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP013475.1_616297_616459_-	NA	NA|106aa|up_6|NZ_CP013475.1_616505_616823_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|623aa|up_5|NZ_CP013475.1_616969_618838_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP013475.1_618733_619741_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP013475.1_619822_620701_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP013475.1_620717_621512_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP013475.1_621508_622549_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP013475.1_622558_623992_-	NA	NA|211aa|down_0|NZ_CP013475.1_626003_626636_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP013475.1_626632_627295_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP013475.1_627315_628665_-	NA	NA|381aa|down_3|NZ_CP013475.1_628676_629819_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP013475.1_629833_630136_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP013475.1_630195_630474_-	NA	NA|418aa|down_6|NZ_CP013475.1_630470_631724_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP013475.1_631843_632230_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP013475.1_632292_633177_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP013475.1_633272_634175_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	4	686280-686356	2	CRISPRCasFinder	no	c2c9_V-U4	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP013475.1_672176_672584_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP013475.1_672643_673330_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP013475.1_673483_676117_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP013475.1_676139_678527_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP013475.1_678664_679387_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP013475.1_679383_680181_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP013475.1_680182_681070_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP013475.1_681075_682290_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|344aa|up_1|NZ_CP013475.1_682286_683318_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|482aa|up_0|NZ_CP013475.1_683314_684760_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP013475.1_687491_689042_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP013475.1_689093_689486_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP013475.1_689482_689740_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP013475.1_689922_691158_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP013475.1_691408_691822_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP013475.1_691818_692055_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP013475.1_692158_692665_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP013475.1_692778_693249_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP013475.1_693292_694054_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP013475.1_694110_694422_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	5	1571666-1572738	3	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	1	1	1571866-1571887	NZ_CP013475.1_1208698-1208677	NA	15	15	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP013475.1_1563429_1563747_+,NA	NA|103aa|up_9|NZ_CP013475.1_1560944_1561253_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP013475.1_1561249_1562869_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP013475.1_1563429_1563747_+	NA	NA|209aa|up_6|NZ_CP013475.1_1563881_1564508_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP013475.1_1564573_1564906_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP013475.1_1564921_1566178_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP013475.1_1566305_1567517_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP013475.1_1567589_1569068_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP013475.1_1569064_1570450_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP013475.1_1570527_1571562_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP013475.1_1573592_1573994_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP013475.1_1573990_1574248_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP013475.1_1574330_1575290_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP013475.1_1575314_1576277_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP013475.1_1576410_1577013_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP013475.1_1577093_1579061_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP013475.1_1579078_1579903_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP013475.1_1580071_1580554_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP013475.1_1580625_1581450_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP013475.1_1581646_1582585_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	6	2068819-2069073	3	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2068900-2068917|2068900-2068917|2068990-2069007	NZ_CP013475.1_395352-395335|NZ_CP013475.1_601615-601598|NZ_CP013475.1_3428975-3428958	NA	5	5	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP013475.1_2068178_2068442_-,NA	NA|165aa|up_9|NZ_CP013475.1_2054528_2055023_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP013475.1_2055370_2056048_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP013475.1_2056406_2059232_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP013475.1_2059458_2060319_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP013475.1_2060359_2061226_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP013475.1_2061230_2063117_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP013475.1_2063132_2065166_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP013475.1_2065285_2067511_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP013475.1_2067786_2068182_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP013475.1_2068178_2068442_-	NA	NA|346aa|down_0|NZ_CP013475.1_2070210_2071248_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP013475.1_2071247_2072615_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP013475.1_2072788_2074225_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP013475.1_2074260_2075712_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP013475.1_2075741_2076692_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP013475.1_2076706_2077123_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP013475.1_2077400_2077823_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_7|NZ_CP013475.1_2077871_2078174_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP013475.1_2078170_2078485_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP013475.1_2078484_2080218_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	7	2150040-2150259	4	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|157aa|up_9|NZ_CP013475.1_2133019_2133490_-,NA|136aa|up_1|NZ_CP013475.1_2140502_2140910_-,NA|127aa|down_5|NZ_CP013475.1_2157775_2158156_-	NA|157aa|up_9|NZ_CP013475.1_2133019_2133490_-	NA	NA|155aa|up_8|NZ_CP013475.1_2133829_2134294_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_7|NZ_CP013475.1_2134469_2136692_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_6|NZ_CP013475.1_2136729_2137173_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|152aa|up_5|NZ_CP013475.1_2137286_2137742_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_4|NZ_CP013475.1_2137963_2138569_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_3|NZ_CP013475.1_2138668_2139673_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_2|NZ_CP013475.1_2139772_2140525_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_1|NZ_CP013475.1_2140502_2140910_-	NA	NA|767aa|up_0|NZ_CP013475.1_2141044_2143345_+	PLN02892, PLN02892, isocitrate lyase	NA|155aa|down_0|NZ_CP013475.1_2152286_2152751_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP013475.1_2152848_2153712_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP013475.1_2153749_2155021_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP013475.1_2155292_2156408_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP013475.1_2156398_2157739_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP013475.1_2157775_2158156_-	NA	NA|621aa|down_6|NZ_CP013475.1_2158312_2160175_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP013475.1_2160182_2160662_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP013475.1_2160898_2161672_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP013475.1_2161675_2162443_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	8	3101093-3102240	1,5,4,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-C,Type III-D,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A:II-B,III-A	13,14,15,13	15	TypeIII-A,TypeIII-C,TypeIII-D,TypeIII-B	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP013475.1_3094372_3094627_-,NA|135aa|up_7|NZ_CP013475.1_3094774_3095179_+,NA|64aa|up_6|NZ_CP013475.1_3095175_3095367_+,NA|86aa|up_4|NZ_CP013475.1_3096953_3097211_+,NA|104aa|up_3|NZ_CP013475.1_3097315_3097627_+,NA|203aa|up_2|NZ_CP013475.1_3098046_3098655_+,NA	NA|92aa|up_9|NZ_CP013475.1_3093921_3094197_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP013475.1_3094372_3094627_-	NA	NA|135aa|up_7|NZ_CP013475.1_3094774_3095179_+	NA	NA|64aa|up_6|NZ_CP013475.1_3095175_3095367_+	NA	NA|385aa|up_5|NZ_CP013475.1_3095565_3096720_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP013475.1_3096953_3097211_+	NA	NA|104aa|up_3|NZ_CP013475.1_3097315_3097627_+	NA	NA|203aa|up_2|NZ_CP013475.1_3098046_3098655_+	NA	NA|470aa|up_1|NZ_CP013475.1_3098725_3100135_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP013475.1_3100131_3100944_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP013475.1_3102271_3103533_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csm3gr7|237aa|down_1|NZ_CP013475.1_3103896_3104607_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_2|NZ_CP013475.1_3104616_3104991_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_3|NZ_CP013475.1_3104987_3107426_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|315aa|down_4|NZ_CP013475.1_3107422_3108367_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_5|NZ_CP013475.1_3108544_3109090_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|down_6|NZ_CP013475.1_3109361_3110246_-	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_7|NZ_CP013475.1_3110248_3111136_-	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|182aa|down_8|NZ_CP013475.1_3111440_3111986_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|down_9|NZ_CP013475.1_3111982_3112252_-	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	9	3645027-3645145	6	CRISPRCasFinder	no	cas3	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Unclear	GCCCCTGTGAGTCGAGTGAGCGGAACGAAC	30	1	1	3645057-3645115	NZ_CP013475.1_3645120-3645178	NA	1	1	Unclear	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|138aa|down_6|NZ_CP013475.1_3650778_3651192_-,NA|126aa|down_7|NZ_CP013475.1_3651226_3651604_-	NA|719aa|up_9|NZ_CP013475.1_3631853_3634010_+	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|223aa|up_8|NZ_CP013475.1_3634006_3634675_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|395aa|up_7|NZ_CP013475.1_3634775_3635960_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|765aa|up_6|NZ_CP013475.1_3635964_3638259_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|390aa|up_5|NZ_CP013475.1_3638247_3639417_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|175aa|up_4|NZ_CP013475.1_3639441_3639966_-	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase	NA|430aa|up_3|NZ_CP013475.1_3639962_3641252_-	TIGR01161, N5-carboxyaminoimidazole_ribonucleotide_synthase, phosphoribosylaminoimidazole carboxylase, PurK protein	NA|273aa|up_2|NZ_CP013475.1_3641205_3642024_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|173aa|up_1|NZ_CP013475.1_3641978_3642497_-	pfam03703, bPH_2, Bacterial PH domain	NA|267aa|up_0|NZ_CP013475.1_3642539_3643340_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|223aa|down_0|NZ_CP013475.1_3645411_3646080_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|298aa|down_1|NZ_CP013475.1_3646120_3647014_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|144aa|down_2|NZ_CP013475.1_3647010_3647442_+	COG2166, sufE, Cysteine desulfurase SufE subunit [Posttranslational modification, protein turnover, chaperones]	NA|601aa|down_3|NZ_CP013475.1_3647549_3649352_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|262aa|down_4|NZ_CP013475.1_3649361_3650147_-	PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed	NA|146aa|down_5|NZ_CP013475.1_3650143_3650581_-	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]	NA|138aa|down_6|NZ_CP013475.1_3650778_3651192_-	NA	NA|126aa|down_7|NZ_CP013475.1_3651226_3651604_-	NA	NA|450aa|down_8|NZ_CP013475.1_3651637_3652987_-	PRK08297, PRK08297, L-lysine aminotransferase; Provisional	NA|151aa|down_9|NZ_CP013475.1_3653037_3653490_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	10	3725769-3726345	5	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGTTGCCNCCGNNGCCGCCG	25	0	0	NA	NA	NA	7	7	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP013475.1_3740577_3740865_-,NA|87aa|down_8|NZ_CP013475.1_3753984_3754245_-	NA|282aa|up_9|NZ_CP013475.1_3704989_3705835_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP013475.1_3706309_3706750_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP013475.1_3706783_3707653_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP013475.1_3707673_3708684_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP013475.1_3708968_3709601_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP013475.1_3709667_3710897_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP013475.1_3711179_3712529_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP013475.1_3712540_3713680_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP013475.1_3713676_3714408_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2538aa|up_0|NZ_CP013475.1_3714416_3722030_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP013475.1_3728447_3728705_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP013475.1_3728960_3738434_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP013475.1_3739059_3739506_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|273aa|down_3|NZ_CP013475.1_3739542_3740361_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP013475.1_3740577_3740865_-	NA	NA|265aa|down_5|NZ_CP013475.1_3752594_3753389_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_6|NZ_CP013475.1_3753470_3753842_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|137aa|down_7|NZ_CP013475.1_3753739_3754150_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_8|NZ_CP013475.1_3753984_3754245_-	NA	NA|130aa|down_9|NZ_CP013475.1_3754359_3754749_+	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	11	3836234-3836323	7	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_8|NZ_CP013475.1_3826913_3827144_+,NA|73aa|up_3|NZ_CP013475.1_3832533_3832752_+,NA|121aa|down_0|NZ_CP013475.1_3837308_3837671_-,NA|52aa|down_2|NZ_CP013475.1_3839512_3839668_-,NA|52aa|down_3|NZ_CP013475.1_3839692_3839848_-,NA|238aa|down_6|NZ_CP013475.1_3843883_3844597_-	NA|409aa|up_9|NZ_CP013475.1_3825727_3826954_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_8|NZ_CP013475.1_3826913_3827144_+	NA	NA|177aa|up_7|NZ_CP013475.1_3828567_3829098_+	pfam00823, PPE, PPE family	NA|252aa|up_6|NZ_CP013475.1_3829415_3830171_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|421aa|up_5|NZ_CP013475.1_3830254_3831516_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|100aa|up_4|NZ_CP013475.1_3831739_3832039_-	pfam00934, PE, PE family	NA|73aa|up_3|NZ_CP013475.1_3832533_3832752_+	NA	NA|553aa|up_2|NZ_CP013475.1_3832744_3834403_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|337aa|up_1|NZ_CP013475.1_3834428_3835439_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|148aa|up_0|NZ_CP013475.1_3835496_3835940_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP013475.1_3837308_3837671_-	NA	NA|179aa|down_1|NZ_CP013475.1_3837833_3838370_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP013475.1_3839512_3839668_-	NA	NA|52aa|down_3|NZ_CP013475.1_3839692_3839848_-	NA	NA|461aa|down_4|NZ_CP013475.1_3841040_3842423_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP013475.1_3842460_3843882_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP013475.1_3843883_3844597_-	NA	NA|285aa|down_7|NZ_CP013475.1_3844607_3845462_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP013475.1_3845683_3847558_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP013475.1_3847579_3848056_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	12	3937330-3939954	6	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGCGGNNCCGGCGGNNNNGGCGGNNCCGGCGG	33	10	22	3937363-3937401|3937363-3937401|3937435-3937488|3937435-3937488|3937435-3937488|3937522-3937605|3937522-3937605|3937639-3937707|3937639-3937707|3937741-3937806|3937972-3938052|3937972-3938052|3938086-3938151|3938086-3938151|3938185-3938226|3938185-3938226|3938260-3938298|3938260-3938298|3938260-3938298|3938860-3938898|3938860-3938898|3938860-3938898	NZ_CP013475.1_3937012-3937050|NZ_CP013475.1_3936700-3936738|NZ_CP013475.1_3936799-3936852|NZ_CP013475.1_3937084-3937137|NZ_CP013475.1_3922312-3922365|NZ_CP013475.1_3936886-3936969|NZ_CP013475.1_3937171-3937254|NZ_CP013475.1_3936625-3936693|NZ_CP013475.1_3937288-3937356|NZ_CP013475.1_3937030-3937095|NZ_CP013475.1_3936817-3936897|NZ_CP013475.1_3937102-3937182|NZ_CP013475.1_3936931-3936996|NZ_CP013475.1_3937216-3937281|NZ_CP013475.1_3936652-3936693|NZ_CP013475.1_3937315-3937356|NZ_CP013475.1_3936727-3936765|NZ_CP013475.1_3937039-3937077|NZ_CP013475.1_3922267-3922305|NZ_CP013475.1_3936727-3936765|NZ_CP013475.1_3937039-3937077|NZ_CP013475.1_3922267-3922305	NA	32	32	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP013475.1_3943341_3944181_+	NA|255aa|up_9|NZ_CP013475.1_3909463_3910228_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_8|NZ_CP013475.1_3910453_3911407_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_7|NZ_CP013475.1_3911431_3911623_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_6|NZ_CP013475.1_3911837_3913040_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_5|NZ_CP013475.1_3913064_3914186_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_4|NZ_CP013475.1_3914256_3915765_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|516aa|up_3|NZ_CP013475.1_3925412_3926960_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_2|NZ_CP013475.1_3926956_3927793_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|699aa|up_1|NZ_CP013475.1_3930507_3932604_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|219aa|up_0|NZ_CP013475.1_3934796_3935453_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP013475.1_3940734_3942381_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP013475.1_3942454_3943246_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP013475.1_3943341_3944181_+	NA	NA|399aa|down_3|NZ_CP013475.1_3944235_3945432_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP013475.1_3945460_3946171_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP013475.1_3946235_3947279_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP013475.1_3947431_3948343_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP013475.1_3948358_3949423_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP013475.1_3949439_3950624_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP013475.1_3950665_3951697_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_001855255.1_ASM185525v1	NZ_CP013475	Mycobacterium tuberculosis strain 1458, complete genome	13	4100494-4100582	8	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP013475.1_4091080_4091851_-,NA|119aa|up_3|NZ_CP013475.1_4096985_4097342_+,NA|52aa|up_2|NZ_CP013475.1_4097441_4097597_+,NA|233aa|up_0|NZ_CP013475.1_4099598_4100297_-,NA|126aa|down_6|NZ_CP013475.1_4105817_4106195_+	NA|288aa|up_9|NZ_CP013475.1_4089462_4090326_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP013475.1_4091080_4091851_-	NA	NA|549aa|up_7|NZ_CP013475.1_4091847_4093494_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP013475.1_4093490_4094354_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP013475.1_4094346_4095273_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP013475.1_4095274_4096900_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP013475.1_4096985_4097342_+	NA	NA|52aa|up_2|NZ_CP013475.1_4097441_4097597_+	NA	NA|652aa|up_1|NZ_CP013475.1_4097607_4099563_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP013475.1_4099598_4100297_-	NA	NA|173aa|down_0|NZ_CP013475.1_4100642_4101161_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP013475.1_4101161_4102145_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP013475.1_4102137_4103331_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP013475.1_4103336_4104158_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP013475.1_4104289_4104973_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP013475.1_4104972_4105710_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP013475.1_4105817_4106195_+	NA	NA|225aa|down_7|NZ_CP013475.1_4106293_4106968_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP013475.1_4107073_4107868_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP013475.1_4107874_4108330_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
