The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017640	Methylobacterium sp. C1 chromosome, complete genome	6459145	1400422	1458163	6459145	protease,tRNA,transposase,portal,capsid,head,tail,terminase	Burkholderia_virus(21.43%)	60	NA	NA
WP_070998764.1|1400422_1402522_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_024830717.1|1402574_1403018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998765.1|1403086_1403998_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_029361065.1|1404197_1404647_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012318141.1|1404796_1405075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070998767.1|1405111_1406716_-	Na+/H+ antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	32.0	3.9e-12
WP_012318143.1|1406818_1407331_-	MmcB family DNA repair protein	NA	NA	NA	NA	NA
WP_070998769.1|1407447_1408224_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_012318145.1|1408240_1408762_-	DedA family protein	NA	NA	NA	NA	NA
WP_012318146.1|1408898_1409747_+	pyridoxal kinase PdxY	NA	NA	NA	NA	NA
WP_070998770.1|1409804_1410689_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_012318148.1|1410681_1411416_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_070998772.1|1411596_1412595_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_070998774.1|1412719_1414990_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_083374294.1|1415835_1416516_+	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	41.6	4.8e-20
WP_070998776.1|1417546_1417945_+	cupin domain-containing protein	NA	A0A1V0SH58	Hokovirus	41.1	2.8e-20
WP_159392713.1|1418475_1418928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083374295.1|1419418_1420684_-	sulfotransferase family 2 domain-containing protein	NA	NA	NA	NA	NA
WP_159392714.1|1421933_1422773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998777.1|1423913_1424708_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_107645293.1|1425698_1426453_-|transposase	IS5-like element ISMra5 family transposase	transposase	NA	NA	NA	NA
WP_159392715.1|1426597_1428343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070998782.1|1429160_1429541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071000645.1|1429515_1429773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998784.1|1430137_1430329_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998787.1|1430325_1430574_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_070998790.1|1430575_1431283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998792.1|1431363_1432062_-	TIGR02594 family protein	NA	H6WBN0	Rhodobacter_phage	46.0	3.5e-42
WP_159392716.1|1432094_1432250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998795.1|1432279_1434016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998797.1|1434026_1434215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998799.1|1434218_1435571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159392717.1|1435580_1436129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159392718.1|1436141_1436549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998805.1|1436550_1436904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998807.1|1436900_1438469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998809.1|1438497_1439190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998811.1|1439197_1440661_-	hypothetical protein	NA	S4TTF5	Salmonella_phage	27.2	2.9e-22
WP_107645333.1|1440660_1441038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998812.1|1441046_1441628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998814.1|1441631_1443920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998816.1|1444072_1444501_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_070998817.1|1444497_1444950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998818.1|1444952_1445426_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_070998819.1|1445425_1446004_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_070998820.1|1446003_1446348_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_070998821.1|1446347_1447016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998823.1|1447032_1447293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071000647.1|1447352_1448549_-|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	64.1	4.5e-130
WP_071000648.1|1448666_1449362_-|head,protease	HK97 family phage prohead protease	head,protease	Q6JIM8	Burkholderia_virus	65.0	4.1e-67
WP_070998824.1|1449391_1450678_-|portal	phage portal protein	portal	Q6JIM9	Burkholderia_virus	49.6	6.1e-101
WP_070998826.1|1450684_1452355_-|terminase	terminase large subunit	terminase	S4TSQ6	Salmonella_phage	53.5	9.9e-160
WP_070998828.1|1452362_1452719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159392719.1|1452943_1453354_-	HNH endonuclease	NA	B5WZZ4	Pseudomonas_phage	38.6	1.1e-11
WP_070998831.1|1453505_1454090_-	hypothetical protein	NA	A0A068C9G5	Rhizobium_phage	27.2	3.4e-06
WP_070998833.1|1454091_1454643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083374299.1|1454642_1455773_-	DUF1376 domain-containing protein	NA	A0A076GD06	Sinorhizobium_phage	35.2	3.0e-11
WP_070998835.1|1455772_1457224_-	helicase DnaB	NA	A0A076G7E6	Sinorhizobium_phage	32.6	9.8e-47
WP_070998837.1|1457220_1457457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070998839.1|1457461_1458163_-	hypothetical protein	NA	A0A076GD02	Sinorhizobium_phage	48.2	3.1e-46
>prophage 2
NZ_CP017640	Methylobacterium sp. C1 chromosome, complete genome	6459145	5674516	5696280	6459145	head,protease,transposase,portal	Geobacillus_phage(33.33%)	21	NA	NA
WP_012321873.1|5674516_5675710_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	39.4	1.0e-54
WP_012321874.1|5675769_5676324_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	47.3	8.9e-25
WP_159392784.1|5677349_5677574_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_071000302.1|5679179_5679497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159392785.1|5679638_5679971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000761.1|5680212_5680404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071000303.1|5680403_5682578_-	AAA family ATPase	NA	R4TQL5	Phaeocystis_globosa_virus	33.9	5.8e-27
WP_071000304.1|5682837_5683110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000305.1|5683342_5684716_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
WP_071000306.1|5684902_5685418_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_071000307.1|5685474_5686593_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_071000308.1|5686728_5688168_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_083374430.1|5688384_5688795_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_071000309.1|5688849_5689518_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_071000762.1|5689556_5690234_-	AhpC/TSA family protein	NA	NA	NA	NA	NA
WP_071000310.1|5690338_5691232_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_071000763.1|5691801_5692449_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_083374501.1|5692453_5693095_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_071000311.1|5693117_5694200_-	DUF4114 domain-containing protein	NA	NA	NA	NA	NA
WP_159392786.1|5694500_5694743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071000312.1|5694999_5696280_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP017640	Methylobacterium sp. C1 chromosome, complete genome	6459145	5822020	5841760	6459145	protease,transposase,head,tail	Paenibacillus_phage(33.33%)	20	NA	NA
WP_107645323.1|5822020_5822771_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	43.2	1.8e-23
WP_071000397.1|5823197_5823398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071000398.1|5825277_5825622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000786.1|5826281_5826467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000399.1|5826498_5826777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159392803.1|5828071_5828485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159392804.1|5829666_5830362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159392805.1|5830358_5832599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083374457.1|5832606_5833680_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_083374458.1|5833682_5835608_+	TniQ family protein	NA	NA	NA	NA	NA
WP_012321876.1|5836286_5836832_-	DNA starvation/stationary phase protection protein Dps	NA	A0A222YYG6	Streptomyces_phage	28.5	1.2e-05
WP_012321877.1|5836953_5837865_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_024828359.1|5838014_5838788_-	S1 family peptidase	NA	NA	NA	NA	NA
WP_029361546.1|5838813_5839377_+	phiE125 gp8 family protein	NA	NA	NA	NA	NA
WP_012321880.1|5839400_5839754_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_012321881.1|5839750_5840179_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_012321882.1|5840190_5840601_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_053622351.1|5840606_5840954_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_076730264.1|5841013_5841172_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_071000406.1|5841181_5841760_+|tail	phage tail tape measure protein	tail	A0A1B2AP03	Escherichia_phage	41.4	3.2e-09
>prophage 4
NZ_CP017640	Methylobacterium sp. C1 chromosome, complete genome	6459145	6054801	6065179	6459145	integrase	Paracoccus_phage(20.0%)	16	6063864:6063881	6075827:6075844
WP_083374466.1|6054801_6055593_+	ERF family protein	NA	M4Q0X4	Dunaliella_viridis_virus	30.7	2.9e-13
WP_071000500.1|6055594_6056173_+	hypothetical protein	NA	B3FK10	Pseudomonas_phage	46.0	3.2e-25
WP_071000501.1|6056165_6056801_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	52.9	4.0e-53
WP_071000502.1|6056800_6057568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000503.1|6057567_6057861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159392818.1|6057860_6058004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000504.1|6058003_6058528_+	hypothetical protein	NA	A0A2H4J3D3	uncultured_Caudovirales_phage	42.3	9.7e-21
WP_071000505.1|6058524_6059418_+	DNA adenine methylase	NA	A0A0K1LM14	Caulobacter_phage	61.2	1.5e-90
WP_071000506.1|6059414_6061106_+	hypothetical protein	NA	A0A1B0V7P0	Salmonella_phage	35.2	3.1e-68
WP_071000507.1|6061110_6061767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000508.1|6061759_6061984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071000509.1|6061976_6062258_+	hypothetical protein	NA	A0A0K1LMR3	Caulobacter_phage	54.3	1.0e-16
WP_159392819.1|6062283_6063093_+	hypothetical protein	NA	A0A0U2BXG7	Paracoccus_phage	34.0	1.7e-19
WP_083374467.1|6063089_6063473_+	DUF4031 domain-containing protein	NA	R9TSA1	Rhizobium_phage	75.4	2.3e-24
WP_159392820.1|6063700_6063844_-	hypothetical protein	NA	NA	NA	NA	NA
6063864:6063881	attL	GCGTCGGCGAAGGCCTTG	NA	NA	NA	NA
WP_071000512.1|6063973_6065179_+|integrase	site-specific integrase	integrase	A0A240F4W2	Ochrobactrum_phage	32.1	8.4e-52
WP_071000512.1|6063973_6065179_+|integrase	site-specific integrase	integrase	A0A240F4W2	Ochrobactrum_phage	32.1	8.4e-52
6075827:6075844	attR	GCGTCGGCGAAGGCCTTG	NA	NA	NA	NA
