prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_001854305.1_ASM185430v1	NZ_CP017748	Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence	4493942	168408	175451	DBSCAN-SWA		Vibrio_phage(50.0%)	9	NA	NA
GCF_001854305.1_ASM185430v1	NZ_CP017748	Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence	4493942	444527	478656	DBSCAN-SWA	transposase	Erwinia_phage(25.0%)	26	NA	NA
GCF_001854305.1_ASM185430v1	NZ_CP017748	Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence	4493942	1281551	1290500	DBSCAN-SWA		Tupanvirus(16.67%)	8	NA	NA
GCF_001854305.1_ASM185430v1	NZ_CP017748	Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence	4493942	3499606	3560496	DBSCAN-SWA	transposase,tRNA,integrase	Bacillus_phage(16.67%)	53	3492242:3492258	3565133:3565149
GCF_001854305.1_ASM185430v1	NZ_CP017748	Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence	4493942	4429002	4478717	DBSCAN-SWA	plate,coat,integrase,tail,terminase	Pseudomonas_phage(25.81%)	65	4426075:4426091	4437830:4437846
GCF_001854305.1_ASM185430v1	NZ_CP017749	Cupriavidus sp. USMAA2-4 chromosome 2, complete sequence	3659407	6006	18507	DBSCAN-SWA	integrase	Pseudomonas_phage(36.36%)	17	5244:5259	22887:22902
GCF_001854305.1_ASM185430v1	NZ_CP017749	Cupriavidus sp. USMAA2-4 chromosome 2, complete sequence	3659407	3579477	3618469	DBSCAN-SWA	head,terminase,tail	Burkholderia_phage(50.0%)	52	NA	NA
GCF_001854305.1_ASM185430v1	NZ_CP017749	Cupriavidus sp. USMAA2-4 chromosome 2, complete sequence	3659407	3626829	3651822	DBSCAN-SWA	integrase,tail	Burkholderia_phage(31.82%)	36	3623291:3623304	3639728:3639741
GCF_001854305.1_ASM185430v1	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	544877	18864	84899	DBSCAN-SWA	integrase,transposase	Salmonella_phage(20.0%)	58	13562:13577	35033:35048
GCF_001854305.1_ASM185430v1	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	544877	321201	373589	DBSCAN-SWA	integrase,transposase	Salmonella_phage(15.38%)	44	318388:318405	374505:374522
GCF_001854305.1_ASM185430v1	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	544877	450280	514781	DBSCAN-SWA	integrase,transposase	Bacillus_phage(18.75%)	55	450862:450881	483002:483021
