assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001831495.1_ASM183149v1	NZ_CP017689	Thalassotalea crassostreae strain LPB0090 chromosome, complete genome	1	1155337-1155489	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG	Orphan	AATGCCGCGGTCACATGGACGTGAAAGAGCGGTCTTACATCCTGTAAGGC	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG	NA|508aa|up_4|NZ_CP017689.1_1150518_1152042_+,NA|84aa|up_2|NZ_CP017689.1_1152407_1152659_-,NA|99aa|down_9|NZ_CP017689.1_1165438_1165735_-	NA|212aa|up_9|NZ_CP017689.1_1145331_1145967_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|416aa|up_8|NZ_CP017689.1_1146013_1147261_+	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism]	NA|501aa|up_7|NZ_CP017689.1_1147262_1148765_+	TIGR03805, beta_helix_1, parallel beta-helix repeat-containing protein	NA|183aa|up_6|NZ_CP017689.1_1148916_1149465_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|225aa|up_5|NZ_CP017689.1_1149713_1150388_+	cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs	NA|508aa|up_4|NZ_CP017689.1_1150518_1152042_+	NA	NA|114aa|up_3|NZ_CP017689.1_1152059_1152401_+	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|84aa|up_2|NZ_CP017689.1_1152407_1152659_-	NA	NA|265aa|up_1|NZ_CP017689.1_1152802_1153597_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|405aa|up_0|NZ_CP017689.1_1153639_1154854_-	TIGR03937, Poly-beta-16-N-acetyl-D-glucosamine_synthase, poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA|153aa|down_0|NZ_CP017689.1_1155637_1156096_-	PRK10743, PRK10743, heat shock chaperone IbpA	NA|205aa|down_1|NZ_CP017689.1_1156430_1157045_+	pfam06041, DUF924, Bacterial protein of unknown function (DUF924)	NA|197aa|down_2|NZ_CP017689.1_1157135_1157726_-	cd03014, PRX_Atyp2cys, Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx)	NA|558aa|down_3|NZ_CP017689.1_1157842_1159516_-	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases	NA|514aa|down_4|NZ_CP017689.1_1159664_1161206_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|294aa|down_5|NZ_CP017689.1_1161283_1162165_-	COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	NA|153aa|down_6|NZ_CP017689.1_1162196_1162655_-	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|339aa|down_7|NZ_CP017689.1_1162654_1163671_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|481aa|down_8|NZ_CP017689.1_1163734_1165177_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|99aa|down_9|NZ_CP017689.1_1165438_1165735_-	NA
GCF_001831495.1_ASM183149v1	NZ_CP017689	Thalassotalea crassostreae strain LPB0090 chromosome, complete genome	2	1171996-1172097	2	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG	Orphan	GCCACGTCCGCAATTTGATTTTTATTACTTCAATAACA	38	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG	NA|99aa|up_4|NZ_CP017689.1_1165438_1165735_-,NA|97aa|down_7|NZ_CP017689.1_1185951_1186242_+	NA|514aa|up_9|NZ_CP017689.1_1159664_1161206_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|294aa|up_8|NZ_CP017689.1_1161283_1162165_-	COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	NA|153aa|up_7|NZ_CP017689.1_1162196_1162655_-	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|339aa|up_6|NZ_CP017689.1_1162654_1163671_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|481aa|up_5|NZ_CP017689.1_1163734_1165177_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|99aa|up_4|NZ_CP017689.1_1165438_1165735_-	NA	NA|389aa|up_3|NZ_CP017689.1_1166109_1167276_+	PRK08020, ubiF, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed	NA|268aa|up_2|NZ_CP017689.1_1167295_1168099_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|266aa|up_1|NZ_CP017689.1_1168381_1169179_-	pfam01391, Collagen, Collagen triple helix repeat (20 copies)	NA|610aa|up_0|NZ_CP017689.1_1169653_1171483_+	COG5616, COG5616, Predicted integral membrane protein [Function unknown]	NA|1026aa|down_0|NZ_CP017689.1_1173000_1176078_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|391aa|down_1|NZ_CP017689.1_1176093_1177266_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|339aa|down_2|NZ_CP017689.1_1178094_1179111_-	cd01545, PBP1_SalR, ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators	NA|548aa|down_3|NZ_CP017689.1_1179334_1180978_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|231aa|down_4|NZ_CP017689.1_1181101_1181794_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|889aa|down_5|NZ_CP017689.1_1182385_1185052_+	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor	NA|237aa|down_6|NZ_CP017689.1_1185192_1185903_+	pfam07277, SapC, SapC	NA|97aa|down_7|NZ_CP017689.1_1185951_1186242_+	NA	NA|892aa|down_8|NZ_CP017689.1_1186356_1189032_+	cd06569, GH20_Sm-chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin	NA|296aa|down_9|NZ_CP017689.1_1189289_1190177_+	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
GCF_001831495.1_ASM183149v1	NZ_CP017689	Thalassotalea crassostreae strain LPB0090 chromosome, complete genome	3	1405802-1405892	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG	Orphan	AATACTAAATGAGGTTCAGTTAATGGA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG	NA|195aa|up_9|NZ_CP017689.1_1395460_1396045_-,NA	NA|195aa|up_9|NZ_CP017689.1_1395460_1396045_-	NA	NA|322aa|up_8|NZ_CP017689.1_1396220_1397186_-	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA|245aa|up_7|NZ_CP017689.1_1397194_1397929_-	TIGR00740, tRNA_cmo5U34-methyltransferase, tRNA (cmo5U34)-methyltransferase	NA|594aa|up_6|NZ_CP017689.1_1398353_1400135_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|176aa|up_5|NZ_CP017689.1_1400317_1400845_+	PRK00039, ruvC, Holliday junction resolvase; Reviewed	NA|396aa|up_4|NZ_CP017689.1_1401044_1402232_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|209aa|up_3|NZ_CP017689.1_1402363_1402990_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|336aa|up_2|NZ_CP017689.1_1403015_1404023_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|188aa|up_1|NZ_CP017689.1_1404081_1404645_-	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|328aa|up_0|NZ_CP017689.1_1404645_1405629_-	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]	NA|139aa|down_0|NZ_CP017689.1_1406421_1406838_+	TIGR02799, Acyl-CoA_thioesterase_YbgC, tol-pal system-associated acyl-CoA thioesterase	NA|231aa|down_1|NZ_CP017689.1_1406827_1407520_+	TIGR02796, Protein_TolQ, TolQ protein	NA|141aa|down_2|NZ_CP017689.1_1407528_1407951_+	TIGR02801, Protein_TolR, TolR protein	NA|319aa|down_3|NZ_CP017689.1_1408002_1408959_+	pfam06519, TolA, TolA C-terminal	NA|452aa|down_4|NZ_CP017689.1_1408979_1410335_+	PRK04792, tolB, Tol-Pal system protein TolB	NA|184aa|down_5|NZ_CP017689.1_1410386_1410938_+	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|253aa|down_6|NZ_CP017689.1_1410981_1411740_+	COG1729, COG1729, Uncharacterized protein conserved in bacteria [Function unknown]	NA|289aa|down_7|NZ_CP017689.1_1412992_1413859_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|312aa|down_8|NZ_CP017689.1_1414209_1415145_+	pfam05231, MASE1, MASE1	NA|352aa|down_9|NZ_CP017689.1_1415220_1416276_+	PRK09375, PRK09375, quinolinate synthase NadA
GCF_001831495.1_ASM183149v1	NZ_CP017689	Thalassotalea crassostreae strain LPB0090 chromosome, complete genome	4	1894440-1894566	4	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG	Orphan	GATTTAAAATCCCTCGTATTCTTTATACCGAGACGTGGT	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG	NA|88aa|up_3|NZ_CP017689.1_1889675_1889939_+,NA|89aa|down_1|NZ_CP017689.1_1896048_1896315_+	NA|82aa|up_9|NZ_CP017689.1_1882920_1883166_+	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|637aa|up_8|NZ_CP017689.1_1883152_1885063_+	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed	NA|588aa|up_7|NZ_CP017689.1_1885059_1886823_+	pfam11949, DUF3466, Protein of unknown function (DUF3466)	NA|271aa|up_6|NZ_CP017689.1_1886971_1887784_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|316aa|up_5|NZ_CP017689.1_1887937_1888885_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|172aa|up_4|NZ_CP017689.1_1888941_1889457_-	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA|88aa|up_3|NZ_CP017689.1_1889675_1889939_+	NA	NA|215aa|up_2|NZ_CP017689.1_1889965_1890610_+	PRK09483, PRK09483, response regulator; Provisional	NA|620aa|up_1|NZ_CP017689.1_1890615_1892475_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|203aa|up_0|NZ_CP017689.1_1892613_1893222_+	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|118aa|down_0|NZ_CP017689.1_1895611_1895965_+	PRK10687, PRK10687, purine nucleoside phosphoramidase; Provisional	NA|89aa|down_1|NZ_CP017689.1_1896048_1896315_+	NA	NA|297aa|down_2|NZ_CP017689.1_1896404_1897295_+	cd05151, ChoK-like, Choline Kinase and similar proteins	NA|357aa|down_3|NZ_CP017689.1_1897422_1898493_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|275aa|down_4|NZ_CP017689.1_1898492_1899317_+	PRK11697, PRK11697, two-component system response regulator BtsR	NA|344aa|down_5|NZ_CP017689.1_1899352_1900384_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|478aa|down_6|NZ_CP017689.1_1900452_1901886_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|286aa|down_7|NZ_CP017689.1_1901900_1902758_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|489aa|down_8|NZ_CP017689.1_1903032_1904499_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|231aa|down_9|NZ_CP017689.1_1904498_1905191_+	cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate
GCF_001831495.1_ASM183149v1	NZ_CP017689	Thalassotalea crassostreae strain LPB0090 chromosome, complete genome	5	3391762-3391855	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG	Orphan	CTTCGGGGCTCACTCCGTTCGAAGAAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG	NA,NA	NA|300aa|up_9|NZ_CP017689.1_3380803_3381703_-	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region	NA|521aa|up_8|NZ_CP017689.1_3381709_3383272_-	cd10325, SLC5sbd_vSGLT, Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) and related proteins; solute binding domain	NA|207aa|up_7|NZ_CP017689.1_3383306_3383927_-	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed	NA|314aa|up_6|NZ_CP017689.1_3384021_3384963_-	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase	NA|252aa|up_5|NZ_CP017689.1_3384962_3385718_-	cd05233, SDR_c, classical (c) SDRs	NA|231aa|up_4|NZ_CP017689.1_3385950_3386643_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|243aa|up_3|NZ_CP017689.1_3387407_3388136_-	PRK13322, PRK13322, pantothenate kinase; Reviewed	NA|325aa|up_2|NZ_CP017689.1_3388135_3389110_-	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|344aa|up_1|NZ_CP017689.1_3389109_3390141_-	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase	NA|356aa|up_0|NZ_CP017689.1_3390299_3391367_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|292aa|down_0|NZ_CP017689.1_3391898_3392774_+	cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes	NA|156aa|down_1|NZ_CP017689.1_3392974_3393442_+	pfam04353, Rsd_AlgQ, Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	NA|247aa|down_2|NZ_CP017689.1_3393566_3394307_-	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|80aa|down_3|NZ_CP017689.1_3394574_3394814_+	pfam04102, SlyX, SlyX	NA|64aa|down_4|NZ_CP017689.1_3394829_3395021_-	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]	NA|638aa|down_5|NZ_CP017689.1_3395106_3397020_+	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|192aa|down_6|NZ_CP017689.1_3397079_3397655_-	pfam03831, PhnA, PhnA domain	NA|151aa|down_7|NZ_CP017689.1_3397879_3398332_+	pfam03724, META, META domain	NA|325aa|down_8|NZ_CP017689.1_3398414_3399389_+	PRK10985, PRK10985, putative hydrolase; Provisional	NA|75aa|down_9|NZ_CP017689.1_3399388_3399613_+	PRK04966, PRK04966, hypothetical protein; Provisional
