assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001766375.1_ASM176637v1	NZ_CP016876	Legionella pneumophila subsp. pneumophila strain FFI337 chromosome, complete genome	1	711561-711727	1	CRISPRCasFinder	no		DinG,cas3,WYL,PrimPol,csa3,DEDDh,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,RT	Orphan	AAATTTACCGCGATAACAGTAATTT	25	0	0	NA	NA	NA	2	2	Orphan	DinG,cas3,WYL,PrimPol,csa3,DEDDh,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,RT	NA|449aa|up_5|NZ_CP016876.1_703218_704565_+,NA|66aa|up_3|NZ_CP016876.1_705312_705510_-,NA|223aa|up_0|NZ_CP016876.1_710650_711319_+,NA|145aa|down_6|NZ_CP016876.1_718674_719109_+,NA|485aa|down_8|NZ_CP016876.1_720719_722174_+	NA|403aa|up_9|NZ_CP016876.1_699523_700732_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|87aa|up_8|NZ_CP016876.1_700752_701013_-	cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox)	NA|465aa|up_7|NZ_CP016876.1_701015_702410_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|212aa|up_6|NZ_CP016876.1_702414_703050_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|449aa|up_5|NZ_CP016876.1_703218_704565_+	NA	NA|252aa|up_4|NZ_CP016876.1_704554_705310_-	cd19916, OphMA_like, tetrapyrrole methylase family protein similar to Omphalotus olearius omphalotin methyltransferase (OphMA) and Dendrothele bispora dbOphMA	NA|66aa|up_3|NZ_CP016876.1_705312_705510_-	NA	NA|409aa|up_2|NZ_CP016876.1_705529_706756_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|504aa|up_1|NZ_CP016876.1_709100_710612_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|223aa|up_0|NZ_CP016876.1_710650_711319_+	NA	NA|75aa|down_0|NZ_CP016876.1_711748_711973_+	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|103aa|down_1|NZ_CP016876.1_711972_712281_+	TIGR03071, couple_hipA, HipA N-terminal domain	NA|313aa|down_2|NZ_CP016876.1_712277_713216_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|363aa|down_3|NZ_CP016876.1_713740_714829_-	pfam00665, rve, Integrase core domain	NA|458aa|down_4|NZ_CP016876.1_715184_716558_+	pfam13173, AAA_14, AAA domain	NA|302aa|down_5|NZ_CP016876.1_716756_717662_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|145aa|down_6|NZ_CP016876.1_718674_719109_+	NA	NA|213aa|down_7|NZ_CP016876.1_719176_719815_-	pfam09445, Methyltransf_15, RNA cap guanine-N2 methyltransferase	NA|485aa|down_8|NZ_CP016876.1_720719_722174_+	NA	NA|303aa|down_9|NZ_CP016876.1_722539_723448_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
GCF_001766375.1_ASM176637v1	NZ_CP016876	Legionella pneumophila subsp. pneumophila strain FFI337 chromosome, complete genome	2	1345059-1348388	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	DinG,cas3,WYL,PrimPol,csa3,DEDDh,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,RT	Type I-F	GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAA	28,28,28,27	0	0	NA	NA	I-F:I-F:I-F:I-F	55,55,55,55	55	TypeI-F	DinG,cas3,WYL,PrimPol,csa3,DEDDh,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,RT	NA|64aa|up_7|NZ_CP016876.1_1334701_1334893_+,NA|168aa|down_0|NZ_CP016876.1_1349246_1349750_-	NA|481aa|up_9|NZ_CP016876.1_1331862_1333305_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|299aa|up_8|NZ_CP016876.1_1333537_1334434_-	pfam00153, Mito_carr, Mitochondrial carrier protein	NA|64aa|up_7|NZ_CP016876.1_1334701_1334893_+	NA	NA|97aa|up_6|NZ_CP016876.1_1335182_1335473_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	cas1|323aa|up_5|NZ_CP016876.1_1336665_1337634_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1132aa|up_4|NZ_CP016876.1_1337630_1341026_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|422aa|up_3|NZ_CP016876.1_1341018_1342284_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|314aa|up_2|NZ_CP016876.1_1342280_1343222_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|342aa|up_1|NZ_CP016876.1_1343237_1344263_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_0|NZ_CP016876.1_1344272_1344827_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|168aa|down_0|NZ_CP016876.1_1349246_1349750_-	NA	NA|349aa|down_1|NZ_CP016876.1_1349860_1350907_-	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	NA|326aa|down_2|NZ_CP016876.1_1351211_1352189_-	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|416aa|down_3|NZ_CP016876.1_1352909_1354157_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|234aa|down_4|NZ_CP016876.1_1354099_1354801_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|382aa|down_5|NZ_CP016876.1_1354781_1355927_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|543aa|down_6|NZ_CP016876.1_1355923_1357552_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|282aa|down_7|NZ_CP016876.1_1357595_1358441_-	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|450aa|down_8|NZ_CP016876.1_1358418_1359768_-	TIGR03760, ICE_TraI_Pfluor, integrating conjugative element relaxase, PFL_4751 family	NA|257aa|down_9|NZ_CP016876.1_1359792_1360563_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
