assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001766355.1_ASM176635v1	NZ_CP016874	Legionella pneumophila subsp. pneumophila strain FFI329, complete genome	1	1938738-1939488	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	DEDDh,csa3,RT,cas3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,12,11	12	TypeI-F	DEDDh,csa3,RT,cas3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	NA|179aa|up_0|NZ_CP016874.1_1937342_1937879_+,NA|64aa|down_7|NZ_CP016874.1_1953228_1953420_-,NA|496aa|down_9|NZ_CP016874.1_1954981_1956469_-	NA|282aa|up_9|NZ_CP016874.1_1927958_1928804_+	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|543aa|up_8|NZ_CP016874.1_1928847_1930476_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|382aa|up_7|NZ_CP016874.1_1930472_1931618_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|234aa|up_6|NZ_CP016874.1_1931598_1932300_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|416aa|up_5|NZ_CP016874.1_1932242_1933490_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|109aa|up_4|NZ_CP016874.1_1933646_1933973_-	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|140aa|up_3|NZ_CP016874.1_1933965_1934385_-	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like	NA|326aa|up_2|NZ_CP016874.1_1934937_1935915_+	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|349aa|up_1|NZ_CP016874.1_1936219_1937266_+	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	NA|179aa|up_0|NZ_CP016874.1_1937342_1937879_+	NA	cas6f|185aa|down_0|NZ_CP016874.1_1943294_1943849_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|342aa|down_1|NZ_CP016874.1_1943858_1944884_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|314aa|down_2|NZ_CP016874.1_1944899_1945841_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|422aa|down_3|NZ_CP016874.1_1945837_1947103_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3-cas2|1132aa|down_4|NZ_CP016874.1_1947095_1950491_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|323aa|down_5|NZ_CP016874.1_1950487_1951456_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|97aa|down_6|NZ_CP016874.1_1952648_1952939_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|64aa|down_7|NZ_CP016874.1_1953228_1953420_-	NA	NA|299aa|down_8|NZ_CP016874.1_1953687_1954584_+	pfam00153, Mito_carr, Mitochondrial carrier protein	NA|496aa|down_9|NZ_CP016874.1_1954981_1956469_-	NA
GCF_001766355.1_ASM176635v1	NZ_CP016874	Legionella pneumophila subsp. pneumophila strain FFI329, complete genome	2	1939854-1943063	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	DEDDh,csa3,RT,cas3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	53,53,13	53	TypeI-F	DEDDh,csa3,RT,cas3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	NA|179aa|up_0|NZ_CP016874.1_1937342_1937879_+,NA|64aa|down_7|NZ_CP016874.1_1953228_1953420_-,NA|496aa|down_9|NZ_CP016874.1_1954981_1956469_-	NA|282aa|up_9|NZ_CP016874.1_1927958_1928804_+	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|543aa|up_8|NZ_CP016874.1_1928847_1930476_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|382aa|up_7|NZ_CP016874.1_1930472_1931618_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|234aa|up_6|NZ_CP016874.1_1931598_1932300_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|416aa|up_5|NZ_CP016874.1_1932242_1933490_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|109aa|up_4|NZ_CP016874.1_1933646_1933973_-	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|140aa|up_3|NZ_CP016874.1_1933965_1934385_-	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like	NA|326aa|up_2|NZ_CP016874.1_1934937_1935915_+	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|349aa|up_1|NZ_CP016874.1_1936219_1937266_+	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	NA|179aa|up_0|NZ_CP016874.1_1937342_1937879_+	NA	cas6f|185aa|down_0|NZ_CP016874.1_1943294_1943849_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|342aa|down_1|NZ_CP016874.1_1943858_1944884_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|314aa|down_2|NZ_CP016874.1_1944899_1945841_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|422aa|down_3|NZ_CP016874.1_1945837_1947103_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3-cas2|1132aa|down_4|NZ_CP016874.1_1947095_1950491_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|323aa|down_5|NZ_CP016874.1_1950487_1951456_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|97aa|down_6|NZ_CP016874.1_1952648_1952939_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|64aa|down_7|NZ_CP016874.1_1953228_1953420_-	NA	NA|299aa|down_8|NZ_CP016874.1_1953687_1954584_+	pfam00153, Mito_carr, Mitochondrial carrier protein	NA|496aa|down_9|NZ_CP016874.1_1954981_1956469_-	NA
GCF_001766355.1_ASM176635v1	NZ_CP016874	Legionella pneumophila subsp. pneumophila strain FFI329, complete genome	3	2577816-2577982	3	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	Orphan	AAATTACTGTTATGGCGGTAAATTT	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,RT,cas3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	NA|485aa|up_8|NZ_CP016874.1_2567368_2568823_-,NA|145aa|up_6|NZ_CP016874.1_2570433_2570868_-,NA|223aa|down_0|NZ_CP016874.1_2578223_2578892_-	NA|303aa|up_9|NZ_CP016874.1_2566094_2567003_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|485aa|up_8|NZ_CP016874.1_2567368_2568823_-	NA	NA|213aa|up_7|NZ_CP016874.1_2569727_2570366_+	pfam09445, Methyltransf_15, RNA cap guanine-N2 methyltransferase	NA|145aa|up_6|NZ_CP016874.1_2570433_2570868_-	NA	NA|302aa|up_5|NZ_CP016874.1_2571880_2572786_-	pfam04471, Mrr_cat, Restriction endonuclease	NA|458aa|up_4|NZ_CP016874.1_2572984_2574358_-	pfam13173, AAA_14, AAA domain	NA|363aa|up_3|NZ_CP016874.1_2574713_2575802_+	pfam00665, rve, Integrase core domain	NA|313aa|up_2|NZ_CP016874.1_2576326_2577265_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|103aa|up_1|NZ_CP016874.1_2577261_2577570_-	TIGR03071, couple_hipA, HipA N-terminal domain	NA|75aa|up_0|NZ_CP016874.1_2577569_2577794_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|223aa|down_0|NZ_CP016874.1_2578223_2578892_-	NA	NA|504aa|down_1|NZ_CP016874.1_2578930_2580442_-	COG3177, COG3177, Fic family protein [Function unknown]	NA|355aa|down_2|NZ_CP016874.1_2583241_2584306_+	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA	NA|320aa|down_3|NZ_CP016874.1_2584394_2585354_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|406aa|down_4|NZ_CP016874.1_2585383_2586601_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|351aa|down_5|NZ_CP016874.1_2586607_2587660_-	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|42aa|down_6|NZ_CP016874.1_2587784_2587910_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|131aa|down_7|NZ_CP016874.1_2587867_2588260_-	pfam13276, HTH_21, HTH-like domain	NA|203aa|down_8|NZ_CP016874.1_2589079_2589688_+	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|284aa|down_9|NZ_CP016874.1_2589684_2590536_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system
