assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001766295.1_ASM176629v1	NZ_CP016870	Legionella pneumophila subsp. pneumophila strain FFI103, complete genome	1	1734335-1734501	1	CRISPRCasFinder	no		cas3,RT,csa3,DEDDh,DinG,WYL,PrimPol,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	AAATTTACCGCGATAACAGTAATTT	25	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,csa3,DEDDh,DinG,WYL,PrimPol,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|223aa|up_0|NZ_CP016870.1_1733424_1734093_+,NA|145aa|down_6|NZ_CP016870.1_1741448_1741883_+,NA|485aa|down_8|NZ_CP016870.1_1743493_1744948_+	NA|284aa|up_9|NZ_CP016870.1_1721780_1722632_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|203aa|up_8|NZ_CP016870.1_1722628_1723237_-	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|131aa|up_7|NZ_CP016870.1_1724056_1724449_+	pfam13276, HTH_21, HTH-like domain	NA|42aa|up_6|NZ_CP016870.1_1724406_1724532_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|351aa|up_5|NZ_CP016870.1_1724656_1725709_+	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|406aa|up_4|NZ_CP016870.1_1725715_1726933_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|320aa|up_3|NZ_CP016870.1_1726962_1727922_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|355aa|up_2|NZ_CP016870.1_1728010_1729075_-	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA	NA|504aa|up_1|NZ_CP016870.1_1731874_1733386_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|223aa|up_0|NZ_CP016870.1_1733424_1734093_+	NA	NA|75aa|down_0|NZ_CP016870.1_1734522_1734747_+	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|103aa|down_1|NZ_CP016870.1_1734746_1735055_+	TIGR03071, couple_hipA, HipA N-terminal domain	NA|313aa|down_2|NZ_CP016870.1_1735051_1735990_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|363aa|down_3|NZ_CP016870.1_1736514_1737603_-	pfam00665, rve, Integrase core domain	NA|458aa|down_4|NZ_CP016870.1_1737958_1739332_+	pfam13173, AAA_14, AAA domain	NA|302aa|down_5|NZ_CP016870.1_1739530_1740436_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|145aa|down_6|NZ_CP016870.1_1741448_1741883_+	NA	NA|213aa|down_7|NZ_CP016870.1_1741950_1742589_-	pfam09445, Methyltransf_15, RNA cap guanine-N2 methyltransferase	NA|485aa|down_8|NZ_CP016870.1_1743493_1744948_+	NA	NA|303aa|down_9|NZ_CP016870.1_1745313_1746222_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
GCF_001766295.1_ASM176629v1	NZ_CP016870	Legionella pneumophila subsp. pneumophila strain FFI103, complete genome	2	2369247-2372457	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas3,RT,csa3,DEDDh,DinG,WYL,PrimPol,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	52,53,53	53	TypeI-F	cas3,RT,csa3,DEDDh,DinG,WYL,PrimPol,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|496aa|up_9|NZ_CP016870.1_2355840_2357328_+,NA|64aa|up_7|NZ_CP016870.1_2358889_2359081_+,NA|179aa|down_0|NZ_CP016870.1_2374430_2374967_-	NA|496aa|up_9|NZ_CP016870.1_2355840_2357328_+	NA	NA|299aa|up_8|NZ_CP016870.1_2357725_2358622_-	pfam00153, Mito_carr, Mitochondrial carrier protein	NA|64aa|up_7|NZ_CP016870.1_2358889_2359081_+	NA	NA|97aa|up_6|NZ_CP016870.1_2359370_2359661_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	cas1|323aa|up_5|NZ_CP016870.1_2360853_2361822_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1132aa|up_4|NZ_CP016870.1_2361818_2365214_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|422aa|up_3|NZ_CP016870.1_2365206_2366472_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|314aa|up_2|NZ_CP016870.1_2366468_2367410_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|342aa|up_1|NZ_CP016870.1_2367425_2368451_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_0|NZ_CP016870.1_2368460_2369015_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|179aa|down_0|NZ_CP016870.1_2374430_2374967_-	NA	NA|349aa|down_1|NZ_CP016870.1_2375043_2376090_-	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	NA|326aa|down_2|NZ_CP016870.1_2376394_2377372_-	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|140aa|down_3|NZ_CP016870.1_2377924_2378344_+	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like	NA|109aa|down_4|NZ_CP016870.1_2378336_2378663_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|416aa|down_5|NZ_CP016870.1_2378819_2380067_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|234aa|down_6|NZ_CP016870.1_2380009_2380711_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|382aa|down_7|NZ_CP016870.1_2380691_2381837_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|543aa|down_8|NZ_CP016870.1_2381833_2383462_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|282aa|down_9|NZ_CP016870.1_2383505_2384351_-	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase
GCF_001766295.1_ASM176629v1	NZ_CP016870	Legionella pneumophila subsp. pneumophila strain FFI103, complete genome	3	2372823-2373572	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas3,RT,csa3,DEDDh,DinG,WYL,PrimPol,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,12,12	12	TypeI-F	cas3,RT,csa3,DEDDh,DinG,WYL,PrimPol,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|496aa|up_9|NZ_CP016870.1_2355840_2357328_+,NA|64aa|up_7|NZ_CP016870.1_2358889_2359081_+,NA|179aa|down_0|NZ_CP016870.1_2374430_2374967_-	NA|496aa|up_9|NZ_CP016870.1_2355840_2357328_+	NA	NA|299aa|up_8|NZ_CP016870.1_2357725_2358622_-	pfam00153, Mito_carr, Mitochondrial carrier protein	NA|64aa|up_7|NZ_CP016870.1_2358889_2359081_+	NA	NA|97aa|up_6|NZ_CP016870.1_2359370_2359661_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	cas1|323aa|up_5|NZ_CP016870.1_2360853_2361822_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1132aa|up_4|NZ_CP016870.1_2361818_2365214_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|422aa|up_3|NZ_CP016870.1_2365206_2366472_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|314aa|up_2|NZ_CP016870.1_2366468_2367410_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|342aa|up_1|NZ_CP016870.1_2367425_2368451_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_0|NZ_CP016870.1_2368460_2369015_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|179aa|down_0|NZ_CP016870.1_2374430_2374967_-	NA	NA|349aa|down_1|NZ_CP016870.1_2375043_2376090_-	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	NA|326aa|down_2|NZ_CP016870.1_2376394_2377372_-	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|140aa|down_3|NZ_CP016870.1_2377924_2378344_+	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like	NA|109aa|down_4|NZ_CP016870.1_2378336_2378663_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|416aa|down_5|NZ_CP016870.1_2378819_2380067_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|234aa|down_6|NZ_CP016870.1_2380009_2380711_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|382aa|down_7|NZ_CP016870.1_2380691_2381837_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|543aa|down_8|NZ_CP016870.1_2381833_2383462_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|282aa|down_9|NZ_CP016870.1_2383505_2384351_-	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase
