The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015941	Legionella pneumophila strain C9_S chromosome, complete genome	3397139	845515	912907	3397139	tRNA,protease,transposase	Pseudomonas_phage(18.18%)	56	NA	NA
WP_010946555.1|845515_846601_+|transposase	IS4-like element ISLpn9 family transposase	transposase	NA	NA	NA	NA
WP_010946556.1|846626_846920_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_013101184.1|847675_849472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011945902.1|849474_850593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011945903.1|850603_851605_-	phosphotransferase	NA	NA	NA	NA	NA
WP_040146700.1|851594_852686_-	N-acetylneuraminate synthase family protein	NA	NA	NA	NA	NA
WP_011945905.1|853325_854012_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_011945906.1|854350_855868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013101185.1|856100_857747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010946509.1|857712_858564_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_070071150.1|858560_859985_+	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	25.3	9.4e-10
WP_010946511.1|859990_861139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014843570.1|861152_862046_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010946516.1|862039_863059_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010946517.1|863270_863978_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_011213314.1|864536_864731_+	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	70.6	3.0e-12
WP_010946519.1|864856_866839_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	32.1	5.8e-50
WP_010946520.1|867001_867997_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010946521.1|868000_868738_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_010946522.1|868819_869773_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_011213315.1|869765_871061_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_126297583.1|871099_871315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010946524.1|871410_871947_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011213316.1|872285_873452_+	DUF1574 family protein	NA	NA	NA	NA	NA
WP_010946526.1|873448_874891_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	40.5	3.9e-72
WP_010946527.1|874989_876366_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_011213317.1|876570_877272_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_011213318.1|877437_878697_+	MFS transporter	NA	NA	NA	NA	NA
WP_011213319.1|880551_881202_+	lpg0796 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_010946534.1|881481_881868_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
WP_010946535.1|881971_883315_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_010946536.1|883389_885039_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_010946537.1|885035_886406_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	49.7	2.2e-112
WP_010946538.1|886558_888262_+	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	26.5	6.5e-42
WP_010946539.1|888464_890168_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010946540.1|890397_891396_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_010946541.1|891620_894008_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	38.1	7.0e-175
WP_010946542.1|894249_895689_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_010946543.1|895685_896528_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_010946544.1|896524_897616_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_010946545.1|897590_899006_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010946546.1|899097_899415_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011213320.1|899610_900648_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_010946548.1|900625_901534_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_010946549.1|901530_902010_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_011213321.1|901945_902548_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_010946551.1|902808_903507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011213322.1|903616_904873_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	74.1	1.9e-14
WP_010946553.1|905274_905610_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	36.5	5.8e-11
WP_011213323.1|905641_907909_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	8.7e-167
WP_010946555.1|908209_909295_+|transposase	IS4-like element ISLpn9 family transposase	transposase	NA	NA	NA	NA
WP_010946556.1|909320_909614_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_010946557.1|909769_910549_+	glycosyltransferase family 2 protein	NA	S5WBE2	Pseudomonas_phage	30.8	6.9e-07
WP_010946558.1|910551_911802_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_011213324.1|911802_912138_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010946560.1|912307_912907_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 2
NZ_CP015941	Legionella pneumophila strain C9_S chromosome, complete genome	3397139	923235	930075	3397139		Acinetobacter_phage(42.86%)	9	NA	NA
WP_010946569.1|923235_924012_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	48.2	3.3e-57
WP_010946570.1|924004_925039_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	3.5e-75
WP_010946571.1|925016_925595_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.0e-55
WP_010946572.1|925628_926354_-	LPS export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.3	3.1e-17
WP_010946573.1|926350_926860_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010946574.1|926840_927410_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_011213328.1|927406_927934_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
WP_010946576.1|927947_928910_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
WP_010946577.1|929277_930075_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-21
>prophage 3
NZ_CP015941	Legionella pneumophila strain C9_S chromosome, complete genome	3397139	1312708	1318645	3397139		Staphylococcus_phage(50.0%)	6	NA	NA
WP_010946911.1|1312708_1313782_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	27.8	2.8e-30
WP_010946912.1|1313766_1314381_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	38.4	3.5e-22
WP_010946913.1|1314377_1315586_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.7	5.4e-99
WP_010946914.1|1315593_1316061_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
WP_010946915.1|1316186_1317824_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.3	3.6e-154
WP_010946916.1|1317820_1318645_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 4
NZ_CP015941	Legionella pneumophila strain C9_S chromosome, complete genome	3397139	2222206	2232330	3397139		Bacillus_phage(16.67%)	7	NA	NA
WP_070071220.1|2222206_2223895_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	30.4	4.7e-16
WP_015444337.1|2224026_2225034_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010947737.1|2225157_2226483_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	1.4e-47
WP_010947738.1|2226501_2227650_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	58.5	1.3e-126
WP_015444336.1|2227858_2228971_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	2.9e-51
WP_010947740.1|2229066_2230206_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
WP_015444335.1|2230395_2232330_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
>prophage 5
NZ_CP015941	Legionella pneumophila strain C9_S chromosome, complete genome	3397139	2274158	2329183	3397139	transposase	Wolbachia_phage(25.0%)	53	NA	NA
WP_010947782.1|2274158_2275610_+|transposase	IS4-like element ISLpn5 family transposase	transposase	Q9JMP3	Wolbachia_phage	56.8	6.1e-158
WP_010947783.1|2275680_2277201_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	48.2	7.9e-124
WP_010947785.1|2278048_2278423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947786.1|2278620_2280228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444248.1|2280230_2280722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947788.1|2280732_2281569_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	48.9	4.9e-67
WP_010947789.1|2282161_2283253_-	DUF4917 family protein	NA	NA	NA	NA	NA
WP_010947790.1|2283484_2289430_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
WP_010947791.1|2289450_2291343_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_021437030.1|2291407_2291872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015444244.1|2291875_2294596_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010947793.1|2294601_2295987_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_010947794.1|2295983_2296406_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
WP_010947795.1|2296395_2297178_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
WP_010947796.1|2297170_2298982_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
WP_015444243.1|2298981_2299650_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_010947798.1|2299665_2300661_-	TraU family protein	NA	NA	NA	NA	NA
WP_010947799.1|2300657_2301266_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_015444242.1|2301262_2301598_-	TrbI F-type domain-containing protein	NA	NA	NA	NA	NA
WP_015444241.1|2301590_2304143_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_010947801.1|2304154_2304505_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_015444240.1|2304518_2305805_-	TraB/VirB10 family protein	NA	NA	NA	NA	NA
WP_010947803.1|2305806_2306520_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
WP_010947804.1|2306522_2307086_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA	NA
WP_010947805.1|2307089_2307383_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_010947806.1|2307384_2307687_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010947807.1|2307701_2307938_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	52.9	2.5e-08
WP_025520140.1|2307951_2308329_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947808.1|2308276_2309161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444237.1|2309333_2310014_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	28.1	1.6e-07
WP_016356978.1|2310162_2310837_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947811.1|2311285_2311858_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_015444236.1|2311841_2312339_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947813.1|2312331_2312919_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_010947814.1|2312923_2315059_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010947815.1|2315077_2315959_-	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_010947816.1|2316065_2316212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947817.1|2316403_2316580_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010947818.1|2316749_2317247_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010947819.1|2317236_2318016_-	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
WP_010947820.1|2318008_2318863_-	DUF692 domain-containing protein	NA	NA	NA	NA	NA
WP_010947821.1|2318877_2319171_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
WP_010947822.1|2319360_2319882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444234.1|2320186_2320645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444232.1|2321218_2321446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947824.1|2321603_2322125_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947825.1|2322296_2322851_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010947826.1|2323284_2323485_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_010947827.1|2323578_2323962_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947828.1|2324015_2324969_-	Abi family protein	NA	A3QSC6	Clostridium_virus	31.8	4.8e-34
WP_015444229.1|2325478_2326897_+|transposase	IS4-like element ISLpn3 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.9	2.3e-56
WP_010947829.1|2326929_2328105_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	21.2	5.2e-14
WP_010947830.1|2328157_2329183_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
