assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	1	664358-664609	1	PILER-CR	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAA	54	0	0	NA	NA	NA	2	2	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA|180aa|down_1|NZ_CP013190.1_666116_666656_-	NA|158aa|up_9|NZ_CP013190.1_653932_654406_-	PRK11425, PRK11425, PTS N-acetylgalactosamine transporter subunit IIB	NA|427aa|up_8|NZ_CP013190.1_654428_655709_-	PRK15458, PRK15458, tagatose 6-phosphate aldolase subunit KbaZ; Provisional	NA|270aa|up_7|NZ_CP013190.1_655957_656767_+	PRK09802, PRK09802, DeoR family transcriptional regulator	NA|155aa|up_6|NZ_CP013190.1_656821_657286_-	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system	NA|112aa|up_5|NZ_CP013190.1_657285_657621_-	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin	NA|524aa|up_4|NZ_CP013190.1_657769_659341_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|NZ_CP013190.1_659715_661050_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|NZ_CP013190.1_661065_661836_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|NZ_CP013190.1_661865_662756_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|NZ_CP013190.1_662852_663998_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|396aa|down_0|NZ_CP013190.1_664907_666095_-	PRK09716, PRK09716, YhaC family protein	NA|180aa|down_1|NZ_CP013190.1_666116_666656_-	NA	NA|115aa|down_2|NZ_CP013190.1_666911_667256_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|down_3|NZ_CP013190.1_667444_668383_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_4|NZ_CP013190.1_668481_669471_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_5|NZ_CP013190.1_669492_670824_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_6|NZ_CP013190.1_670849_672058_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_7|NZ_CP013190.1_672091_674386_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_8|NZ_CP013190.1_674399_674789_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|down_9|NZ_CP013190.1_674860_676225_+	PRK15040, PRK15040, L-serine ammonia-lyase
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	2	1068735-1069617	2,1,1,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	29,29,29,28	0	0	NA	NA	I-E:I-E:I-E:I-E	12,14,14,12	14	Unclear	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|919aa|up_9|NZ_CP013190.1_1055327_1058084_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP013190.1_1058140_1059442_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP013190.1_1059489_1061724_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP013190.1_1061801_1062050_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP013190.1_1062049_1062385_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP013190.1_1062455_1063247_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP013190.1_1063474_1065112_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP013190.1_1065199_1066498_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP013190.1_1066557_1067430_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP013190.1_1067723_1068395_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP013190.1_1070255_1071734_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP013190.1_1071760_1073038_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP013190.1_1073357_1074143_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP013190.1_1074212_1075667_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP013190.1_1075688_1077098_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP013190.1_1077075_1077855_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP013190.1_1077851_1078712_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP013190.1_1078859_1079435_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP013190.1_1079451_1079712_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP013190.1_1079702_1080974_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	3	1095167-1096537	4,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	20,22,22	22	TypeI-E	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|571aa|up_9|NZ_CP013190.1_1083531_1085244_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP013190.1_1085317_1086052_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP013190.1_1086410_1089077_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|451aa|up_6|NZ_CP013190.1_1089491_1090844_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP013190.1_1090992_1091475_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP013190.1_1091487_1092579_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP013190.1_1092581_1093256_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP013190.1_1093242_1093842_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP013190.1_1093857_1094775_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP013190.1_1094776_1095061_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP013190.1_1096557_1097595_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP013190.1_1097846_1098755_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP013190.1_1098756_1100184_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP013190.1_1100183_1100789_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP013190.1_1100838_1101162_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP013190.1_1101355_1101667_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP013190.1_1101685_1102396_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP013190.1_1102395_1102875_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP013190.1_1102871_1103921_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP013190.1_1103901_1104663_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	4	1617232-1617349	3	CRISPRCasFinder	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|62aa|up_9|NZ_CP013190.1_1606517_1606703_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP013190.1_1606715_1607615_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP013190.1_1607807_1608998_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP013190.1_1608994_1610254_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP013190.1_1610243_1611872_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP013190.1_1612144_1613503_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP013190.1_1613507_1614584_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP013190.1_1615046_1615697_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP013190.1_1615750_1616005_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP013190.1_1616004_1617135_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP013190.1_1617368_1619654_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP013190.1_1620349_1624102_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP013190.1_1624229_1624952_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP013190.1_1625098_1627726_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|208aa|down_4|NZ_CP013190.1_1629559_1630183_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1505aa|down_5|NZ_CP013190.1_1630206_1634721_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_6|NZ_CP013190.1_1634721_1636371_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_7|NZ_CP013190.1_1636375_1637152_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_8|NZ_CP013190.1_1637225_1638410_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|441aa|down_9|NZ_CP013190.1_1638440_1639763_-	pfam02667, SCFA_trans, Short chain fatty acid transporter
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	5	2308665-2308788	4	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA|30aa|down_7|NZ_CP013190.1_2317684_2317774_+	NA|471aa|up_9|NZ_CP013190.1_2298119_2299532_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP013190.1_2300088_2300298_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP013190.1_2300752_2301379_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP013190.1_2301399_2303502_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP013190.1_2303514_2304153_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP013190.1_2304216_2304885_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP013190.1_2304881_2305667_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP013190.1_2305670_2306483_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP013190.1_2306494_2308099_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP013190.1_2308224_2308530_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP013190.1_2309102_2310359_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP013190.1_2310399_2311773_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP013190.1_2311987_2312629_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP013190.1_2312668_2313817_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP013190.1_2314107_2315319_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP013190.1_2315431_2316364_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP013190.1_2316360_2317386_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP013190.1_2317684_2317774_+	NA	NA|390aa|down_8|NZ_CP013190.1_2317939_2319109_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP013190.1_2319343_2319925_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	6	2931091-2931182	5	CRISPRCasFinder	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|70aa|up_9|NZ_CP013190.1_2920167_2920377_-,NA	NA|70aa|up_9|NZ_CP013190.1_2920167_2920377_-	NA	NA|1321aa|up_8|NZ_CP013190.1_2920431_2924394_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP013190.1_2924433_2925072_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP013190.1_2925359_2926451_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP013190.1_2926450_2927143_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP013190.1_2927154_2927541_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP013190.1_2927548_2928349_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP013190.1_2928358_2928949_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP013190.1_2928959_2929454_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP013190.1_2929474_2930803_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP013190.1_2931605_2932202_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP013190.1_2932222_2932450_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP013190.1_2932487_2933729_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP013190.1_2934021_2935278_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP013190.1_2935538_2936459_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP013190.1_2936458_2936764_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP013190.1_2936915_2937515_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP013190.1_2937511_2940058_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP013190.1_2940057_2941230_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP013190.1_2941359_2942052_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	7	3073692-3073775	6	CRISPRCasFinder	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	ATCTGCCTGTACGGCAGTGAACT	23	0	0	NA	NA	I-F	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|431aa|up_9|NZ_CP013190.1_3058593_3059886_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP013190.1_3059976_3061320_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP013190.1_3061330_3061942_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1343aa|up_6|NZ_CP013190.1_3062096_3066125_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP013190.1_3066259_3066754_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP013190.1_3067298_3068264_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP013190.1_3068386_3070153_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP013190.1_3070153_3071875_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP013190.1_3071916_3072621_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP013190.1_3072905_3073124_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP013190.1_3073986_3076263_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP013190.1_3076293_3076614_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP013190.1_3076936_3077161_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP013190.1_3077233_3079180_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP013190.1_3079176_3080292_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP013190.1_3080442_3081399_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP013190.1_3081395_3083054_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP013190.1_3083479_3084175_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP013190.1_3084669_3085569_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP013190.1_3085712_3087365_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	8	3207810-3207954	7	CRISPRCasFinder	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|56aa|up_3|NZ_CP013190.1_3204852_3205020_+,NA	NA|62aa|up_9|NZ_CP013190.1_3199613_3199799_-	pfam06085, Rz1, Lipoprotein Rz1 precursor	NA|166aa|up_8|NZ_CP013190.1_3200015_3200513_-	cd16900, endolysin_R21-like, endolysin R21-like proteins	NA|72aa|up_7|NZ_CP013190.1_3200512_3200728_-	pfam04971, Phage_holin_2_1, Bacteriophage P21 holin S	NA|244aa|up_6|NZ_CP013190.1_3200915_3201647_-	PRK09940, PRK09940, transcriptional regulator YdeO; Provisional	NA|320aa|up_5|NZ_CP013190.1_3201998_3202958_-	COG3272, COG3272, Uncharacterized conserved protein [Function unknown]	NA|143aa|up_4|NZ_CP013190.1_3204340_3204769_+	pfam10711, DUF2513, Hypothetical protein (DUF2513)	NA|56aa|up_3|NZ_CP013190.1_3204852_3205020_+	NA	NA|73aa|up_2|NZ_CP013190.1_3205059_3205278_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP013190.1_3205255_3206326_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP013190.1_3206460_3207744_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP013190.1_3207977_3210239_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP013190.1_3210421_3211855_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP013190.1_3211930_3212983_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP013190.1_3213166_3214120_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP013190.1_3214160_3215156_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP013190.1_3215310_3216129_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP013190.1_3216129_3217188_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP013190.1_3217190_3217880_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP013190.1_3217879_3218653_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP013190.1_3218819_3218969_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	9	3460250-3460346	8	CRISPRCasFinder	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|231aa|up_9|NZ_CP013190.1_3452045_3452738_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP013190.1_3452957_3453500_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP013190.1_3453970_3454837_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP013190.1_3454838_3455051_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP013190.1_3455158_3455680_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP013190.1_3455715_3457101_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP013190.1_3457274_3457769_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP013190.1_3457771_3458494_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP013190.1_3458611_3459121_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP013190.1_3459117_3460185_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP013190.1_3460379_3461273_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP013190.1_3461269_3462085_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP013190.1_3462095_3463355_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|262aa|down_3|NZ_CP013190.1_3466637_3467423_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|382aa|down_4|NZ_CP013190.1_3467650_3468796_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_5|NZ_CP013190.1_3468817_3470119_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_6|NZ_CP013190.1_3470175_3471537_-	PRK08044, PRK08044, allantoinase AllB	NA|485aa|down_7|NZ_CP013190.1_3471596_3473051_-	PRK11375, PRK11375, putative allantoin permease	NA|293aa|down_8|NZ_CP013190.1_3473219_3474098_-	PRK15059, PRK15059, 2-hydroxy-3-oxopropionate reductase	NA|259aa|down_9|NZ_CP013190.1_3474197_3474974_-	PRK09997, PRK09997, hydroxypyruvate isomerase; Provisional
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	10	3599464-3599608	9	CRISPRCasFinder	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA|28aa|down_2|NZ_CP013190.1_3601653_3601737_-	NA|357aa|up_9|NZ_CP013190.1_3584602_3585673_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP013190.1_3585765_3586347_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP013190.1_3586351_3588169_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP013190.1_3588324_3589698_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP013190.1_3589773_3591093_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP013190.1_3591499_3592795_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP013190.1_3592852_3593542_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP013190.1_3593731_3594934_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP013190.1_3594930_3598077_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP013190.1_3598202_3599387_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP013190.1_3599631_3600540_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP013190.1_3600664_3601576_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP013190.1_3601653_3601737_-	NA	NA|95aa|down_3|NZ_CP013190.1_3602222_3602507_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP013190.1_3602578_3603256_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP013190.1_3603513_3603705_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP013190.1_3603754_3604279_-	PRK03731, aroL, shikimate kinase AroL	NA|155aa|down_7|NZ_CP013190.1_3604455_3604920_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP013190.1_3605039_3605849_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP013190.1_3605865_3606981_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
GCF_001750845.1_ASM175084v1	NZ_CP013190	Escherichia coli strain FORC_031 chromosome, complete genome	11	3994546-3994678	5	PILER-CR	no		c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	c2c9_V-U4,WYL,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|156aa|up_8|NZ_CP013190.1_3985788_3986256_+,NA	NA|200aa|up_9|NZ_CP013190.1_3985153_3985753_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)	NA|156aa|up_8|NZ_CP013190.1_3985788_3986256_+	NA	NA|60aa|up_7|NZ_CP013190.1_3986354_3986534_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|160aa|up_6|NZ_CP013190.1_3986554_3987034_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_5|NZ_CP013190.1_3987225_3989088_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_4|NZ_CP013190.1_3989080_3989611_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_3|NZ_CP013190.1_3989718_3991050_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_2|NZ_CP013190.1_3991108_3991396_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_1|NZ_CP013190.1_3991392_3992679_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_0|NZ_CP013190.1_3992729_3993671_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|505aa|down_0|NZ_CP013190.1_3994928_3996443_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP013190.1_3996473_3997616_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP013190.1_3997755_3998973_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP013190.1_3999046_4000600_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP013190.1_4000708_4001494_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP013190.1_4001499_4002090_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP013190.1_4002175_4002571_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP013190.1_4002831_4006053_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP013190.1_4006070_4007219_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP013190.1_4007674_4008496_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
